Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 9.6e-251 869.8 464 100.0
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 2.2e-178 629.4 445 76.4
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 8.3e-178 627.5 473 72.7
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 9.2e-177 624.0 439 76.5
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 4.6e-176 621.7 450 75.1
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 7.8e-176 620.9 467 75.2
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 3.1e-172 609.0 479 71.6
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 1.5e-171 606.7 439 76.8
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 2.6e-171 605.9 448 73.7
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 4.4e-171 605.1 453 75.1
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 4.9e-170 601.7 460 73.3
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.1e-169 600.5 479 71.2
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 6.0e-168 594.7 451 76.7
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.7e-167 593.2 479 70.8
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 1.5e-166 590.1 454 70.9
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 5.6e-166 588.2 455 73.0
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 1.2e-165 587.0 478 70.5
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 3.6e-165 585.5 462 70.1
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 3.6e-165 585.5 443 76.1
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 5.2e-164 581.6 459 69.5
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 6.8e-164 581.3 443 75.6
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 1.2e-163 580.5 457 72.9
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 2.0e-163 579.7 470 71.3
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 9.8e-163 577.4 477 67.1
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 1.7e-162 576.6 481 68.4
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 2.2e-162 576.2 444 71.6
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 2.9e-162 575.9 460 69.6
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 3.7e-162 575.5 457 72.6
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 8.3e-162 574.3 457 68.5
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 1.9e-161 573.2 460 71.1
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 3.2e-161 572.4 451 71.0
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 7.1e-161 571.2 446 70.9
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 1.2e-160 570.5 457 69.6
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 4.6e-160 568.5 456 70.4
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 1.5e-158 563.5 446 69.3
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 9.5e-158 560.8 446 70.4
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 3.6e-157 558.9 450 69.3
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 4.7e-157 558.5 447 69.1
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 8.1e-157 557.8 443 70.0
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 8.9e-156 554.3 450 70.4
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 1.2e-155 553.9 451 70.1
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 5.8e-155 551.6 429 74.6
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 2.4e-153 546.2 447 67.8
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 1.2e-152 543.9 476 67.2
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 1.6e-152 543.5 443 67.3
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 1.3e-151 540.4 449 67.5
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 2.3e-151 539.7 448 66.1
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 2.3e-151 539.7 446 64.3
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 6.6e-151 538.1 445 71.2
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 1.8e-148 530.0 464 65.5
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 2.4e-148 529.6 448 66.7
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 3.1e-148 529.3 447 67.1
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 4.4e-147 525.4 467 65.3
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 7.6e-147 524.6 454 64.3
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 6.4e-146 521.5 448 68.3
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 2.1e-144 516.5 448 65.4
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 2.7e-144 516.2 453 61.6
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 3.9e-143 512.3 448 64.5
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 1.5e-142 510.4 460 60.7
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 2.5e-142 509.6 450 63.3
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 2.8e-141 506.1 446 66.4
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 3.6e-141 505.8 457 62.4
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 6.2e-141 505.0 451 61.2
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 1.4e-140 503.8 442 67.2
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 2.4e-140 503.1 449 63.7
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 2.4e-140 503.1 449 63.0
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 3.1e-140 502.7 477 62.9
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 5.3e-140 501.9 464 59.7
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 2.6e-139 499.6 463 58.5
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 3.4e-139 499.2 449 65.7
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 1.7e-138 496.9 423 67.8
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 2.9e-138 496.1 461 58.8
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 6.4e-138 495.0 463 58.7
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 1.9e-137 493.4 607 52.7
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 5.4e-137 491.9 462 62.8
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 1.2e-136 490.7 488 58.4
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 1.6e-136 490.3 454 60.4
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 2.1e-136 490.0 444 64.6
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 6.0e-136 488.4 461 57.9
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 3.0e-135 486.1 385 73.0
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 3.4e-131 472.6 469 56.3
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 4.5e-131 472.2 346 76.0
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 9.9e-131 471.1 448 57.1
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 6.4e-130 468.4 466 56.2
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 1.1e-129 467.6 386 71.5
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 5.5e-129 465.3 490 55.1
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 9.3e-129 464.5 264 96.2
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 1.5e-126 457.2 446 61.0
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 9.0e-124 448.0 349 70.2
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 1.3e-119 434.1 326 75.5
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 1.9e-118 430.3 408 59.3
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 6.9e-116 421.8 356 69.7
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 8.4e-114 414.8 323 68.4
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 4.6e-112 409.1 471 52.4
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 2.2e-109 400.2 320 70.3
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 2.4e-108 396.7 401 60.8
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 5.7e-102 375.6 316 71.5
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 2.0e-91 340.5 272 71.7
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 8.0e-88 328.6 403 48.1
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 9.7e-86 321.6 396 50.5
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 5.0e-82 309.3 327 53.2
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 3.2e-81 306.6 162 96.9
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 1.8e-79 300.8 280 59.6
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.5e-70 271.2 432 43.1
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 2.0e-62 244.2 349 49.0
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 7.0e-60 235.7 349 45.0
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 1.7e-58 231.1 284 50.7
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 2.8e-56 223.8 197 59.9
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 6.4e-53 212.6 602 31.7
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.1e-44 185.3 253 49.8
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 2.1e-43 181.0 99 89.9
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 2.7e-43 180.6 98 89.8
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 5.1e-42 176.4 179 62.6
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 1.5e-41 174.9 97 84.5
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 6.2e-40 169.5 163 62.0
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 2.7e-35 154.1 186 63.4
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 2.3e-26 124.4 363 32.0
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 5.1e-26 123.2 97 66.0
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 8.7e-26 122.5 134 56.0
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 1.1e-25 122.1 112 60.7
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 7.1e-20 102.8 123 48.8
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 8.7e-18 95.9 106 55.7
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 8.7e-18 95.9 54 81.5
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 3.6e-16 90.5 45 88.9
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 1.1e-15 89.0 51 82.4
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 1.1e-15 89.0 51 82.4
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 2.6e-14 84.3 133 39.8
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 1.3e-13 82.0 52 75.0
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 1.6e-11 75.1 81 46.9
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 4.6e-11 73.6 56 60.7
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 1.8e-10 71.6 47 68.1
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 5.1e-10 70.1 41 82.9
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 2.5e-09 67.8 45 71.1
Ah.14g086750 Amaranthus hybridus HOM05D005431 ORTHO05D006762 1.3e-08 65.5 39 79.5
RcHm_v2.0_Chr5g0076741 Rosa chinensis HOM05D005431 ORTHO05D006762 2.8e-08 64.3 52 67.3
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 8.2e-08 62.8 83 45.8
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 2.4e-07 61.2 33 84.8


User provided reference genes

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