Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 7.4e-164 580.5 297 100.0
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 7.5e-140 500.7 296 83.4
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 1.8e-138 496.1 272 86.4
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 1.7e-136 489.6 297 83.2
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 1.9e-135 486.1 271 85.2
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 1.9e-135 486.1 274 84.3
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 1.2e-134 483.4 272 84.6
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 2.8e-134 482.3 277 83.4
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 8.0e-134 480.7 298 82.2
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 1.0e-133 480.3 271 84.9
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 1.8e-133 479.6 294 78.9
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 1.8e-133 479.6 274 84.3
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 3.0e-133 478.8 271 83.4
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 3.0e-133 478.8 299 78.6
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 4.0e-133 478.4 292 78.4
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 4.0e-133 478.4 297 81.8
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 4.0e-133 478.4 270 84.8
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 6.8e-133 477.6 299 78.6
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 6.8e-133 477.6 299 78.6
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 1.2e-132 476.9 270 83.7
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 1.2e-132 476.9 270 84.4
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 1.5e-132 476.5 277 82.3
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 2.0e-132 476.1 274 83.2
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 2.0e-132 476.1 274 83.2
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 2.0e-132 476.1 274 83.2
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 2.6e-132 475.7 271 84.1
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 9.8e-132 473.8 280 82.1
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 1.3e-131 473.4 274 83.2
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 1.7e-131 473.0 280 82.1
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 3.7e-131 471.9 273 80.6
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 3.7e-131 471.9 271 83.4
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 5.4e-130 468.0 271 83.4
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 9.2e-130 467.2 274 80.3
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 1.2e-129 466.8 280 78.9
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 1.6e-129 466.5 272 82.4
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 2.0e-129 466.1 272 80.1
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 2.7e-129 465.7 287 78.0
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 2.7e-129 465.7 277 81.2
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 4.6e-129 464.9 280 81.4
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 7.8e-129 464.2 273 81.3
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 1.3e-128 463.4 272 80.9
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 1.7e-128 463.0 271 80.4
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 6.6e-128 461.1 276 81.5
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 6.6e-128 461.1 297 76.4
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 1.1e-127 460.3 269 79.9
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 1.1e-127 460.3 276 80.1
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 1.5e-127 459.9 269 80.7
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 1.9e-127 459.5 268 80.2
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 2.5e-127 459.1 276 79.7
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 2.5e-127 459.1 300 75.7
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 3.3e-127 458.8 276 79.7
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 3.3e-127 458.8 271 79.3
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 9.5e-127 457.2 276 79.7
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 1.2e-126 456.8 276 79.7
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 4.7e-126 454.9 277 79.8
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 5.2e-125 451.4 272 77.9
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 1.2e-124 450.3 272 78.7
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.2e-124 450.3 276 78.6
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 5.8e-124 448.0 260 81.2
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 7.5e-124 447.6 260 80.8
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 7.5e-124 447.6 254 82.3
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 1.3e-123 446.8 260 80.8
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 1.3e-123 446.8 260 80.8
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 1.3e-123 446.8 260 80.8
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 2.9e-123 445.7 251 85.3
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 6.4e-123 444.5 292 74.0
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 1.1e-122 443.7 254 83.1
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 1.1e-122 443.7 292 73.6
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 5.4e-122 441.4 267 78.7
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 5.4e-122 441.4 276 77.9
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 9.2e-122 440.7 266 80.1
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 1.2e-121 440.3 255 81.6
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 2.1e-121 439.5 274 77.4
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 2.1e-121 439.5 272 77.6
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 2.7e-121 439.1 270 78.5
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 3.5e-121 438.7 296 73.3
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 1.1e-119 433.7 307 71.0
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 4.3e-119 431.8 281 76.2
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 9.5e-119 430.6 255 78.4
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 1.2e-118 430.3 258 81.4
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 2.1e-118 429.5 277 74.7
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 1.1e-117 427.2 291 71.1
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 1.5e-116 423.3 269 77.3
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 2.6e-116 422.5 286 71.0
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 2.6e-116 422.5 248 81.5
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 4.1e-114 415.2 233 84.1
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 1.2e-113 413.7 349 61.9
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 6.0e-113 411.4 278 71.6
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 5.1e-112 408.3 235 82.1
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 8.6e-112 407.5 272 73.2
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 7.3e-111 404.4 297 68.7
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 4.7e-110 401.7 267 74.9
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 4.7e-110 401.7 266 74.8
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 4.0e-109 398.7 298 71.5
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 2.9e-107 392.5 234 81.6
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 6.0e-105 384.8 272 69.9
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 1.0e-104 384.0 234 78.2
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 6.4e-99 364.8 219 86.8
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 4.2e-98 362.1 273 67.8
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 1.3e-94 350.5 210 78.1
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 2.1e-94 349.7 241 70.1
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 4.0e-93 345.5 269 61.7
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 1.2e-89 334.0 254 63.4
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 4.3e-87 325.5 252 62.3
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 3.0e-80 302.8 169 84.6
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 1.6e-78 297.0 166 83.7
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 6.2e-78 295.0 233 63.9
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 3.0e-72 276.2 190 73.2
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 7.2e-66 255.0 237 58.2
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 3.7e-54 216.1 162 63.6
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 5.3e-53 212.2 257 45.5
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 2.7e-49 199.9 116 81.9
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 3.1e-45 186.4 324 36.1
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 1.3e-43 181.0 253 41.1
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.0e-32 144.8 82 79.3
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 5.7e-31 139.0 83 75.9
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 8.6e-27 125.2 247 31.6
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 2.0e-23 114.0 74 70.3
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 3.5e-20 103.2 57 80.7
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 2.3e-16 90.5 249 27.3
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 1.5e-15 87.8 260 28.8
MCO01G641 Micromonas commoda HOM05D006329 ORTHO05D008357 4.9e-14 82.8 235 28.1
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 8.3e-14 82.0 51 70.6
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 1.4e-13 81.3 70 60.0
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 4.6e-12 76.3 51 74.5


User provided reference genes

Program Settings