Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007407001 Vitis vinifera HOM05D005550 ORTHO05D006679 2.2e-76 288.9 145 100.0
CANSAT21G2208 Cannabis sativa HOM05D005550 ORTHO05D006679 9.9e-61 236.9 135 85.2
MD04G1062200 Malus domestica HOM05D005550 ORTHO05D006679 1.3e-60 236.5 135 85.9
RcHm_v2.0_Chr7g0203731 Rosa chinensis HOM05D005550 ORTHO05D006679 1.7e-60 236.1 135 85.9
Prupe.5G066100 Prunus persica HOM05D005550 ORTHO05D006679 2.2e-60 235.7 135 86.7
FvH4_5g19230 Fragaria vesca HOM05D005550 ORTHO05D006679 2.9e-60 235.3 135 85.9
FAN04G3230 Fragaria x ananassa HOM05D005550 ORTHO05D006679 2.9e-60 235.3 135 85.9
FAN18G0162 Fragaria x ananassa HOM05D005550 ORTHO05D006679 2.9e-60 235.3 135 85.9
QL12p011636 Quercus lobata HOM05D005550 ORTHO05D006679 3.7e-60 235.0 134 87.3
TAR375G0818 Trochodendron aralioides HOM05D005550 ORTHO05D006679 6.4e-60 234.2 134 85.8
FAN08G0299 Fragaria x ananassa HOM05D005550 ORTHO05D006679 1.9e-59 232.6 135 85.2
PSO063G2362 Papaver somniferum HOM05D005550 ORTHO05D006679 1.9e-59 232.6 134 84.3
Duzib068G0290 Durio zibethinus HOM05D005550 ORTHO05D006679 2.7e-58 228.8 135 85.2
Ciclev10018920m.g Citrus clementina HOM05D005550 ORTHO05D006679 4.6e-58 228.0 135 83.0
vmacro00189 Vaccinium macrocarpon HOM05D005550 ORTHO05D006679 1.0e-57 226.9 135 83.7
Atru.chr9.1288 Acer truncatum HOM05D005550 ORTHO05D006679 2.3e-57 225.7 135 81.5
MSTRG.12115 Avicennia marina HOM05D005550 ORTHO05D006679 5.1e-57 224.6 135 78.5
Actinidia02146 Actinidia chinensis HOM05D005550 ORTHO05D006679 6.6e-57 224.2 135 81.5
Solyc08g007330.3 Solanum lycopersicum HOM05D005550 ORTHO05D006679 6.6e-57 224.2 135 78.5
Sopen08g003270 Solanum pennellii HOM05D005550 ORTHO05D006679 6.6e-57 224.2 135 78.5
PGSC0003DMG400012503 Solanum tuberosum HOM05D005550 ORTHO05D006679 1.1e-56 223.4 135 78.5
Rhsim11G0009700 Rhododendron simsii HOM05D005550 ORTHO05D006679 1.9e-56 222.6 135 81.5
Thecc.03G248800 Theobroma cacao HOM05D005550 ORTHO05D006679 2.5e-56 222.2 131 83.2
MELO3C005519.2 Cucumis melo HOM05D005550 ORTHO05D006679 4.3e-56 221.5 135 82.2
DCAR_006840 Daucus carota HOM05D005550 ORTHO05D006679 5.6e-56 221.1 135 82.2
Cc08_g12230 Coffea canephora HOM05D005550 ORTHO05D006679 7.3e-56 220.7 135 80.0
FAN13G2137 Fragaria x ananassa HOM05D005550 ORTHO05D006679 7.3e-56 220.7 135 81.5
ClCG01G004190 Citrullus lanatus HOM05D005550 ORTHO05D006679 9.5e-56 220.3 135 82.2
Lj2A221T32 Lonicera japonica HOM05D005550 ORTHO05D006679 9.5e-56 220.3 135 81.5
CiPaw.11G081300 Carya illinoinensis HOM05D005550 ORTHO05D006679 1.6e-55 219.5 127 85.0
Peaxi162Scf00102g01071 Petunia axillaris HOM05D005550 ORTHO05D006679 1.6e-55 219.5 135 77.8
Potri.001G156200 Populus trichocarpa HOM05D005550 ORTHO05D006679 1.6e-55 219.5 135 78.5
MBI04_g09523_MAGBIO Magnolia biondii HOM05D005550 ORTHO05D006679 2.1e-55 219.2 133 80.5
PGR042G2104 Punica granatum HOM05D005550 ORTHO05D006679 2.1e-55 219.2 135 77.0
AUR62007105 Chenopodium quinoa HOM05D005550 ORTHO05D006679 2.8e-55 218.8 135 78.5
COL.COLO4_37144 Corchorus olitorius HOM05D005550 ORTHO05D006679 2.8e-55 218.8 135 80.7
ECA248G1640 Erigeron canadensis HOM05D005550 ORTHO05D006679 4.7e-55 218.0 132 81.1
Migut.A01122 Erythranthe guttata HOM05D005550 ORTHO05D006679 4.7e-55 218.0 135 77.8
Sabra01G0134700 Salix brachista HOM05D005550 ORTHO05D006679 4.7e-55 218.0 136 77.9
AUR62019968 Chenopodium quinoa HOM05D005550 ORTHO05D006679 6.2e-55 217.6 135 77.8
CsaV3_5G004390 Cucumis sativus L. HOM05D005550 ORTHO05D006679 6.2e-55 217.6 135 81.5
SGA_v2.0_scaffold104G30171 Striga asiatica HOM05D005550 ORTHO05D006679 6.2e-55 217.6 135 77.8
CSS0014382 Camellia sinensis var. sinensis HOM05D005550 ORTHO05D006679 1.1e-54 216.9 135 81.5
Oeu002583.1 Olea europaea HOM05D005550 ORTHO05D006679 1.1e-54 216.9 127 81.9
TWI15G1253 Tripterygium wilfordii HOM05D005550 ORTHO05D006679 5.2e-54 214.5 135 77.8
Aqoxy7G00819 Aquilegia oxysepala HOM05D005550 ORTHO05D006679 1.2e-53 213.4 134 78.4
HanXRQChr06g0164431 Helianthus annuus HOM05D005550 ORTHO05D006679 1.5e-53 213.0 135 77.8
Eucgr.E00409 Eucalyptus grandis HOM05D005550 ORTHO05D006679 3.4e-53 211.8 135 77.8
Nitab4.5_0000712g0130 Nicotiana tabacum HOM05D005550 ORTHO05D006679 3.4e-53 211.8 133 75.9
Sed0012504 Sechium edule HOM05D005550 ORTHO05D006679 3.4e-53 211.8 135 78.5
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 1.7e-52 209.5 135 75.6
ATR0057G027 Amborella trichopoda HOM05D005550 ORTHO05D006679 3.8e-52 208.4 134 73.9
arahy.Tifrunner.gnm1.ann1.7NLF36 Arachis hypogaea HOM05D005550 ORTHO05D006679 4.9e-52 208.0 135 74.1
PSO782G0795 Papaver somniferum HOM05D005550 ORTHO05D006679 4.9e-52 208.0 135 77.8
Sc22g0000960 Simmondsia chinensis HOM05D005550 ORTHO05D006679 4.9e-52 208.0 135 74.1
Gohir.A12G215766 Gossypium hirsutum HOM05D005550 ORTHO05D006679 6.4e-52 207.6 135 77.8
Gohir.A12G215866 Gossypium hirsutum HOM05D005550 ORTHO05D006679 6.4e-52 207.6 135 77.8
Nitab4.5_0002225g0010 Nicotiana tabacum HOM05D005550 ORTHO05D006679 6.4e-52 207.6 130 75.4
Gorai.008G234100 Gossypium raimondii HOM05D005550 ORTHO05D006679 1.9e-51 206.1 135 77.0
EL10Ac5g12365 Beta vulgaris HOM05D005550 ORTHO05D006679 3.2e-51 205.3 135 75.6
BcaC07g38064 Brassica carinata HOM05D005550 ORTHO05D006679 5.4e-51 204.5 135 69.6
SalBow6G3355 Salvia bowleyana HOM05D005550 ORTHO05D006679 9.2e-51 203.8 130 75.4
Gohir.D12G218466 Gossypium hirsutum HOM05D005550 ORTHO05D006679 1.2e-50 203.4 134 76.9
BolC8t48465H Brassica oleracea HOM05D005550 ORTHO05D006679 1.6e-50 203.0 135 68.9
BcaB04g18410 Brassica carinata HOM05D005550 ORTHO05D006679 7.8e-50 200.7 135 69.6
A08p13130 Brassica napus HOM05D005550 ORTHO05D006679 3.9e-49 198.4 135 68.1
BraA08t33293Z Brassica rapa HOM05D005550 ORTHO05D006679 3.9e-49 198.4 135 68.1
Lsat_1_v5_gn_3_1200 Lactuca sativa HOM05D005550 ORTHO05D006679 6.6e-49 197.6 125 76.8
HPP92_025386 Vanilla planifolia HOM05D005550 ORTHO05D006679 6.6e-49 197.6 134 69.4
Thhalv10024454m.g Eutrema salsugineum HOM05D005550 ORTHO05D006679 1.1e-48 196.8 135 68.9
Psat2g176640 Pisum sativum HOM05D005550 ORTHO05D006679 1.1e-48 196.8 135 70.4
Aa31LG6G120 Aethionema arabicum HOM05D005550 ORTHO05D006679 1.5e-48 196.4 135 68.9
AL7G37330 Arabidopsis lyrata HOM05D005550 ORTHO05D006679 5.6e-48 194.5 135 69.6
AT4G17380 Arabidopsis thaliana HOM05D005550 ORTHO05D006679 5.6e-48 194.5 135 70.4
THA.LOC104812808 Tarenaya hassleriana HOM05D005550 ORTHO05D006679 5.6e-48 194.5 135 70.4
Phvul.002G057100 Phaseolus vulgaris HOM05D005550 ORTHO05D006679 9.6e-48 193.7 131 74.0
VMungo1215G0570 Vigna mungo HOM05D005550 ORTHO05D006679 9.6e-48 193.7 128 73.4
Zm00001eb105070 Zea mays HOM05D005550 ORTHO05D006679 9.6e-48 193.7 134 68.7
CARHR223990 Cardamine hirsuta HOM05D005550 ORTHO05D006679 2.1e-47 192.6 135 69.6
arahy.Tifrunner.gnm1.ann1.XE7N8H Arachis hypogaea HOM05D005550 ORTHO05D006679 2.8e-47 192.2 121 76.0
TPR.G18117 Trifolium pratense HOM05D005550 ORTHO05D006679 2.8e-47 192.2 161 62.7
unitig_744.g24474 Utricularia gibba HOM05D005550 ORTHO05D006679 2.2e-44 182.6 129 66.7
Haze_16328 Corylus avellana HOM05D005550 ORTHO05D006679 1.4e-43 179.9 135 71.1
Ca_24591_v3 Cicer arietinum L. HOM05D005550 ORTHO05D006679 3.4e-37 158.7 135 61.5
SEGI_10627 Sequoiadendron giganteum HOM05D005550 ORTHO05D006679 2.4e-35 152.5 127 55.1
SHI47845 Sapria himalayana HOM05D005550 ORTHO05D006679 1.0e-33 147.1 190 45.8
SHI48176 Sapria himalayana HOM05D005550 ORTHO05D006679 1.0e-33 147.1 190 45.8
Dinv21648 Davidia involucrata HOM05D005550 ORTHO05D006679 3.0e-33 145.6 80 88.8
Hund11606 Selenicereus undatus HOM05D005550 ORTHO05D006679 5.1e-33 144.8 82 85.4
Pp3c2_940 Physcomitrium patens HOM05D005550 ORTHO05D006679 6.4e-28 127.9 133 43.6
Carub.0007s2403 Capsella rubella HOM05D005550 ORTHO05D006679 8.4e-28 127.5 80 73.8
CDE04G2441 Ceratophyllum demersum HOM05D005550 ORTHO05D006679 1.4e-27 126.7 79 73.4
Glyma.11G034600 Glycine max HOM05D005550 ORTHO05D006679 2.4e-27 125.9 134 50.0
Cpa.g.sc29.185 Carica papaya HOM05D005550 ORTHO05D006679 1.1e-24 117.1 76 75.0
SMO340G0170 Selaginella moellendorffii HOM05D005550 ORTHO05D006679 4.0e-22 108.6 133 42.9
AagrBONN_evm.TU.Sc2ySwM_344.184 Anthoceros agrestis HOM05D005550 ORTHO05D006679 7.6e-21 104.4 130 40.8
CBR_g547 Chara braunii HOM05D005550 ORTHO05D006679 3.7e-15 85.5 86 45.3
Lalb_Chr16g0379491 Lupinus albus HOM05D005550 ORTHO05D006679 3.1e-14 82.4 55 69.1
Lj2g0021636 Lotus japonicus HOM05D005550 ORTHO05D006679 3.2e-11 72.4 39 82.1
Lalb_Chr16g0379501 Lupinus albus HOM05D005550 ORTHO05D006679 1.6e-10 70.1 39 79.5
Medtr5g097770 Medicago truncatula HOM05D001692 ORTHO05D048896 7.9e-10 67.8 60 56.7
Medtr5g021570 Medicago truncatula HOM05D001692 ORTHO05D048896 1.1e-08 63.9 52 57.7
Cre16.g692550 Chlamydomonas reinhardtii HOM05D005550 ORTHO05D006679 7.4e-08 61.2 106 32.1
PRCOL_00003604 Prasinoderma coloniale HOM05D005550 ORTHO05D006679 5.3e-06 55.1 125 30.4


User provided reference genes

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