Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 1.6e-252 875.9 540 100.0
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 2.7e-204 715.7 543 78.6
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 5.1e-203 711.4 543 80.1
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 2.8e-201 705.7 543 79.6
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 3.9e-195 685.3 542 73.8
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 3.3e-194 682.2 545 77.4
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 9.0e-192 674.1 546 75.6
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 4.5e-191 671.8 547 75.5
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 1.3e-190 670.2 542 78.2
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.7e-190 669.8 540 77.4
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 4.9e-190 668.3 542 77.7
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 2.7e-188 662.5 544 69.3
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 2.7e-188 662.5 543 75.7
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 5.1e-187 658.3 543 72.2
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 9.6e-186 654.1 542 73.8
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 2.1e-185 652.9 556 72.8
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 4.9e-182 641.7 546 74.7
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 4.9e-182 641.7 589 71.6
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 4.9e-182 641.7 589 71.6
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 6.5e-182 641.3 555 71.5
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 2.1e-180 636.3 545 74.3
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 9.7e-178 627.5 543 74.2
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 1.6e-177 626.7 543 76.1
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 4.8e-177 625.2 556 76.4
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 8.2e-177 624.4 545 70.5
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 1.1e-176 624.0 538 74.3
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.4e-176 623.6 546 69.8
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 4.1e-176 622.1 543 67.4
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 6.9e-176 621.3 545 73.8
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 3.4e-175 619.0 545 75.2
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 7.6e-175 617.8 544 76.5
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.3e-174 617.1 555 75.5
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 1.7e-174 616.7 540 72.4
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 2.9e-174 615.9 555 75.3
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 5.0e-174 615.1 547 70.9
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 7.2e-173 611.3 550 68.5
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 7.9e-172 607.8 540 67.8
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 1.0e-171 607.4 545 66.4
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 1.8e-171 606.7 542 69.6
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 3.0e-171 605.9 545 66.2
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 8.8e-171 604.4 555 74.8
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 2.5e-170 602.8 584 69.0
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 1.3e-169 600.5 544 69.3
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.7e-169 600.1 532 68.2
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 2.2e-169 599.7 578 70.8
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 2.2e-169 599.7 543 72.2
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 4.8e-169 598.6 547 67.6
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 8.2e-169 597.8 540 65.9
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 8.2e-169 597.8 544 69.7
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 3.4e-167 592.4 554 68.8
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 5.0e-166 588.6 542 70.3
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 4.2e-165 585.5 550 70.0
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 5.5e-165 585.1 555 69.7
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 7.2e-165 584.7 543 74.6
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 2.7e-164 582.8 542 72.7
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 1.0e-163 580.9 529 73.2
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 1.8e-163 580.1 555 67.7
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 5.1e-163 578.6 549 71.2
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 8.8e-163 577.8 558 69.9
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 2.0e-162 576.6 568 66.4
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 2.6e-162 576.2 547 64.5
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 2.2e-161 573.2 574 63.8
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 4.1e-160 568.9 513 73.7
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 1.3e-158 563.9 544 64.2
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 2.2e-158 563.1 552 60.9
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 3.8e-158 562.4 546 67.4
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.1e-157 560.8 540 61.5
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 2.7e-156 556.2 549 70.7
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 2.6e-154 549.7 495 65.9
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 3.3e-154 549.3 552 65.8
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 7.4e-154 548.1 547 67.1
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 1.7e-153 547.0 545 66.6
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.2e-153 546.6 532 65.0
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 4.8e-153 545.4 503 67.0
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 1.1e-152 544.3 547 69.5
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 1.1e-152 544.3 503 67.0
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 7.7e-151 538.1 568 66.5
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 1.9e-149 533.5 548 57.7
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 1.2e-148 530.8 485 70.5
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 2.1e-148 530.0 547 69.7
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 3.0e-147 526.2 516 68.2
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 3.0e-147 526.2 512 71.7
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 1.2e-146 524.2 529 71.1
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 1.5e-146 523.9 544 64.3
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.6e-146 523.1 586 57.8
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 3.1e-144 516.2 561 59.4
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 2.0e-143 513.5 359 78.3
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 2.0e-143 513.5 548 69.9
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 8.5e-142 508.1 550 64.9
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 5.5e-141 505.4 564 62.2
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 3.6e-140 502.7 543 61.7
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 4.7e-140 502.3 547 65.4
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 8.0e-140 501.5 537 57.0
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 1.2e-138 497.7 564 55.7
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 1.5e-138 497.3 558 65.9
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 3.7e-137 492.7 549 65.0
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 4.8e-137 492.3 551 64.8
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 4.8e-137 492.3 551 64.8
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 4.1e-136 489.2 549 64.7
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 4.1e-136 489.2 546 68.1
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 5.4e-136 488.8 543 67.6
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 7.0e-136 488.4 551 64.2
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 5.9e-135 485.3 579 56.0
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 7.7e-135 485.0 497 71.4
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.0e-134 484.6 544 61.2
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 2.5e-133 479.9 536 62.9
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 3.3e-133 479.6 550 52.9
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 8.0e-132 474.9 838 43.9
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 5.7e-130 468.8 464 69.8
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 2.0e-127 460.3 487 63.0
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 4.5e-127 459.1 547 62.7
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 2.9e-126 456.4 552 62.9
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 3.3e-125 453.0 532 57.9
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 4.7e-124 449.1 474 70.0
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 1.1e-120 438.0 538 61.0
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 1.9e-120 437.2 557 57.8
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.1e-117 427.9 586 52.6
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 6.8e-115 418.7 557 53.5
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 2.6e-114 416.8 548 53.5
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 9.8e-114 414.8 544 56.6
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 2.9e-113 413.3 538 58.6
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 2.9e-113 413.3 538 58.6
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 1.1e-112 411.4 412 70.4
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 6.6e-110 402.1 556 53.4
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.6e-108 397.5 326 65.3
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 2.4e-104 383.6 541 45.1
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 3.9e-102 376.3 364 73.4
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 2.4e-99 367.1 441 64.6
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 8.9e-99 365.2 522 59.4
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 5.8e-98 362.5 551 46.8
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.2e-97 360.5 551 46.6
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.4e-96 357.8 544 47.1
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 5.4e-96 355.9 551 46.1
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.2e-95 354.8 544 47.1
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 3.9e-94 349.7 552 43.5
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 6.2e-92 342.4 552 43.5
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 1.2e-90 338.2 427 52.5
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 1.1e-88 331.6 318 78.6
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 1.6e-84 317.8 195 76.9
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 2.3e-78 297.4 372 51.1
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 1.1e-77 295.0 368 67.9
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 1.8e-75 287.7 369 69.4
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 2.1e-68 264.2 314 55.4
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 9.0e-67 258.8 335 49.6
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 4.3e-61 240.0 290 55.5
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 4.2e-56 223.4 509 37.5
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.5e-53 214.2 246 59.8
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.8e-38 164.9 101 72.3
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 3.1e-35 154.1 178 74.2
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 5.9e-34 149.8 238 41.2
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 7.7e-34 149.4 181 63.0
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 8.5e-33 146.0 209 52.6
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 2.4e-27 127.9 173 54.9
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 4.1e-27 127.1 207 52.2
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 4.5e-26 123.6 314 33.4
AagrBONN_evm.TU.Sc2ySwM_228.3786 Anthoceros agrestis HOM05D003850 ORTHO05D004515 3.0e-22 110.9 140 41.4
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 2.8e-20 104.4 204 41.2
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.1e-19 102.4 107 59.8
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 3.1e-19 100.9 316 29.7
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 2.7e-18 97.8 110 60.0
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 4.5e-18 97.1 102 62.7
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 4.5e-18 97.1 56 82.1
VMungo0720G0179 Vigna mungo HOM05D003850 ORTHO05D004515 2.3e-17 94.7 51 84.3
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 3.8e-17 94.0 73 69.9
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 3.8e-17 94.0 73 69.9
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 6.6e-17 93.2 113 58.4
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis HOM05D003850 ORTHO05D004515 1.1e-16 92.4 246 38.2
Eucgr.A01650 Eucalyptus grandis HOM05D002251 ORTHO05D004515 7.2e-16 89.7 54 66.7
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 1.6e-15 88.6 75 62.7
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 3.6e-15 87.4 72 62.5
FAN21G0780 Fragaria x ananassa HOM05D003850 ORTHO05D004515 4.7e-15 87.0 209 42.1
Nitab4.5_0006771g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 5.7e-13 80.1 95 54.7
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 3.7e-12 77.4 59 64.4
arahy.Tifrunner.gnm1.ann1.GFC3N0 Arachis hypogaea HOM05D003850 ORTHO05D004515 7.8e-10 69.7 94 51.1
SEGI_19210 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.1e-08 65.9 130 30.8
CARHR253550 Cardamine hirsuta HOM05D003850 ORTHO05D004515 1.5e-08 65.5 64 54.7
Aa31LG9G10030 Aethionema arabicum HOM05D003850 ORTHO05D004515 5.6e-08 63.5 54 61.1
CBR_g38329 Chara braunii HOM05D003850 ORTHO05D004515 1.0e-06 59.3 96 37.5
PSO339G0182 Papaver somniferum HOM05D009217 ORTHO05D009626 1.8e-06 58.5 163 36.8
COL.COLO4_31841 Corchorus olitorius HOM05D017380 ORTHO05D019049 5.2e-06 57.0 34 88.2


User provided reference genes

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