Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 3.4e-281 971.1 516 100.0
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.7e-278 961.4 516 99.2
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 9.0e-250 866.7 482 95.6
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 9.0e-250 866.7 482 96.3
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 6.5e-248 860.5 482 95.6
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 8.0e-190 667.5 496 75.8
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.3e-168 597.0 443 78.8
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 3.8e-107 392.9 553 50.1
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.7e-105 386.7 579 49.7
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 8.0e-105 385.2 552 51.3
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 8.8e-104 381.7 552 48.4
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 1.7e-102 377.5 553 49.5
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 7.0e-101 372.1 549 49.4
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 7.0e-101 372.1 542 48.9
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 5.9e-100 369.0 556 49.1
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 7.7e-100 368.6 552 48.2
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 1.0e-99 368.2 534 48.9
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 1.7e-99 367.5 560 49.5
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 3.8e-99 366.3 558 46.4
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 8.5e-99 365.2 554 48.0
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 4.2e-98 362.8 546 47.4
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 5.5e-98 362.5 570 48.8
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 7.2e-98 362.1 541 49.4
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 3.6e-97 359.8 546 50.5
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 1.0e-96 358.2 544 48.0
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 3.0e-96 356.7 548 49.5
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 3.0e-96 356.7 543 47.1
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 6.8e-96 355.5 557 46.5
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 1.2e-95 354.8 556 47.7
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 1.5e-95 354.4 552 46.7
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 3.4e-95 353.2 540 47.2
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 3.4e-95 353.2 543 47.7
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 7.5e-95 352.1 552 49.3
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 9.8e-95 351.7 537 47.9
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 1.1e-93 348.2 552 48.2
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 1.4e-93 347.8 545 48.3
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 3.5e-92 343.2 545 48.8
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 3.5e-92 343.2 550 46.0
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 3.5e-92 343.2 539 46.2
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 5.9e-92 342.4 544 48.2
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 7.7e-92 342.0 548 47.1
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.3e-91 340.5 532 46.4
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 6.6e-91 339.0 543 47.0
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 1.1e-90 338.2 550 45.3
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 1.9e-90 337.4 547 45.3
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 2.5e-90 337.0 540 46.1
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 9.5e-90 335.1 536 47.8
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 1.2e-89 334.7 558 44.4
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 1.6e-89 334.3 544 47.1
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 8.0e-89 332.0 559 46.3
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.0e-88 331.6 585 45.3
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.0e-88 331.6 585 45.3
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.8e-88 330.9 551 45.7
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 2.0e-87 327.4 552 45.5
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 2.6e-87 327.0 553 47.4
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 2.6e-87 327.0 557 43.3
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 3.4e-87 326.6 538 45.9
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 7.5e-87 325.5 551 45.0
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 7.5e-87 325.5 566 45.4
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.3e-86 324.7 552 45.1
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 1.3e-86 324.7 538 46.3
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 1.7e-86 324.3 368 56.2
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 8.3e-86 322.0 547 45.5
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 1.4e-85 321.2 544 46.7
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 1.8e-85 320.9 533 46.5
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 4.1e-85 319.7 532 46.4
FAN21G0780 Fragaria x ananassa HOM05D003850 ORTHO05D004515 7.0e-85 318.9 194 95.9
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 9.2e-85 318.5 545 44.6
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 3.5e-84 316.6 565 43.5
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 1.0e-83 315.1 541 44.2
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 8.6e-83 312.0 546 44.3
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 8.6e-83 312.0 546 44.3
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 8.6e-83 312.0 519 44.1
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 1.1e-82 311.6 544 44.1
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 1.9e-82 310.8 575 42.4
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 3.3e-82 310.1 553 43.0
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 4.3e-82 309.7 535 43.4
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 1.2e-81 308.1 542 43.9
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 1.2e-81 308.1 543 43.5
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 1.6e-81 307.8 551 43.7
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 1.6e-81 307.8 548 44.3
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 1.6e-81 307.8 519 45.1
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 2.8e-81 307.0 564 43.3
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 2.8e-81 307.0 510 46.7
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 4.7e-81 306.2 543 43.6
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 6.1e-81 305.8 544 43.6
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 1.0e-80 305.1 545 42.9
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 2.3e-80 303.9 555 44.3
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 4.0e-80 303.1 532 44.0
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 4.0e-80 303.1 517 43.9
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 1.2e-79 301.6 517 45.3
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 2.0e-79 300.8 551 43.6
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 2.0e-79 300.8 533 45.0
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 2.0e-79 300.8 546 42.3
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 7.5e-79 298.9 498 43.6
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 9.8e-79 298.5 558 40.7
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 9.8e-79 298.5 538 43.9
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 9.8e-79 298.5 547 41.3
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 2.9e-78 297.0 568 42.3
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 3.7e-78 296.6 555 42.0
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 8.3e-78 295.4 496 45.4
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 1.1e-77 295.0 546 43.8
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 5.4e-77 292.7 540 44.8
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 1.2e-76 291.6 585 41.0
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 6.0e-76 289.3 556 40.8
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 7.8e-76 288.9 540 43.9
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 1.0e-75 288.5 525 43.2
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 8.6e-75 285.4 491 43.0
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 1.1e-74 285.0 551 42.8
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 5.6e-74 282.7 512 42.4
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 7.3e-74 282.3 524 40.3
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 7.3e-74 282.3 524 40.3
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 1.4e-72 278.1 546 39.2
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 1.8e-72 277.7 532 42.5
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 2.3e-72 277.3 497 45.9
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 1.5e-71 274.6 501 45.7
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 2.6e-71 273.9 342 50.6
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 9.8e-71 271.9 544 41.2
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 1.4e-69 268.1 519 42.4
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 1.0e-67 261.9 493 42.4
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 1.3e-67 261.5 534 39.9
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 3.0e-67 260.4 566 38.3
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 1.1e-66 258.5 479 44.5
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 5.6e-66 256.1 328 50.6
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 1.2e-65 255.0 539 38.2
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 2.1e-65 254.2 516 41.9
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 8.1e-65 252.3 548 40.9
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 9.9e-63 245.4 534 37.3
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 2.4e-61 240.7 514 37.4
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 9.5e-58 228.8 540 40.4
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 1.6e-57 228.0 200 60.5
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 2.4e-56 224.2 554 34.8
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 8.4e-54 215.7 457 41.1
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 9.2e-53 212.2 465 40.0
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 2.5e-50 204.1 406 43.3
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 1.8e-48 198.0 492 38.8
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 1.2e-47 195.3 372 37.9
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 5.4e-45 186.4 283 48.1
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 9.3e-45 185.7 412 38.3
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 1.4e-40 171.8 441 35.8
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 6.9e-40 169.5 513 35.9
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 1.5e-39 168.3 370 43.2
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 2.0e-39 167.9 330 45.8
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 5.8e-39 166.4 319 37.3
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.1e-36 157.9 202 53.0
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 3.5e-28 130.6 102 64.7
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 1.4e-24 118.6 358 38.3
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 1.5e-23 115.2 371 36.4
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 2.0e-23 114.8 280 40.0
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 2.4e-16 91.3 199 40.7
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 5.3e-16 90.1 282 32.6
Eucgr.A01650 Eucalyptus grandis HOM05D002251 ORTHO05D004515 4.2e-13 80.5 57 63.2
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 9.4e-13 79.3 179 40.2
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 7.9e-12 76.3 284 32.0
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.4e-11 75.5 100 53.0
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 1.4e-11 75.5 165 41.8
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 8.2e-09 66.2 499 25.9
VMungo0720G0179 Vigna mungo HOM05D003850 ORTHO05D004515 5.3e-08 63.5 53 52.8
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 4.5e-07 60.5 49 63.3
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 5.9e-07 60.1 161 33.5
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 3.8e-06 57.4 185 37.3


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