Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.5e-215 751.9 398 100.0
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 4.7e-214 747.7 398 99.2
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.2e-211 738.8 398 96.0
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.3e-208 728.8 398 95.0
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.9e-203 711.8 403 95.0
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 1.7e-195 686.0 400 89.5
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 9.9e-172 607.1 314 98.7
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 1.5e-159 566.6 394 77.4
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 4.1e-157 558.5 396 77.3
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 3.8e-147 525.4 413 68.3
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 3.2e-146 522.3 404 72.5
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 1.2e-145 520.4 403 68.7
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 1.4e-144 516.9 404 72.0
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 1.8e-144 516.5 381 70.6
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 2.0e-143 513.1 398 70.6
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 3.3e-143 512.3 403 69.0
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 1.3e-142 510.4 394 70.3
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 1.7e-142 510.0 396 68.9
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 2.2e-142 509.6 400 70.0
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 3.7e-142 508.8 383 70.5
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 6.3e-142 508.1 401 68.6
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 8.2e-142 507.7 383 70.0
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 8.2e-142 507.7 383 70.0
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 1.1e-141 507.3 378 71.2
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 1.4e-141 506.9 402 68.2
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 3.1e-141 505.8 410 68.3
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 5.3e-141 505.0 407 67.3
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 1.5e-140 503.4 407 67.8
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 1.5e-140 503.4 407 67.3
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 2.0e-140 503.1 406 68.5
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 3.5e-140 502.3 411 65.9
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 5.9e-140 501.5 406 66.3
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 1.2e-137 493.8 413 64.4
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 6.1e-137 491.5 403 68.7
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 1.4e-136 490.3 412 64.1
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 1.5e-135 486.9 404 66.1
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 2.6e-135 486.1 400 67.0
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 3.3e-135 485.7 420 63.8
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 3.3e-135 485.7 405 64.7
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 9.7e-135 484.2 333 74.2
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 2.2e-134 483.0 401 65.3
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 2.8e-134 482.6 392 66.1
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 1.1e-133 480.7 406 65.8
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 1.1e-133 480.7 384 68.2
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 2.4e-133 479.6 398 65.6
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 3.1e-133 479.2 417 63.3
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 3.1e-133 479.2 397 64.2
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 2.0e-132 476.5 414 61.4
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 2.6e-132 476.1 409 64.5
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 3.5e-132 475.7 407 63.6
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 4.5e-132 475.3 400 66.0
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 5.9e-132 474.9 355 69.6
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 1.3e-131 473.8 416 62.3
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 2.2e-131 473.0 397 63.7
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 1.1e-130 470.7 401 64.8
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 1.5e-130 470.3 403 62.3
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 2.5e-130 469.5 382 66.0
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 3.2e-130 469.2 374 68.7
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 1.6e-129 466.8 388 64.2
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 2.1e-129 466.5 404 64.9
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 3.6e-129 465.7 418 63.9
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 2.3e-128 463.0 399 66.2
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 5.7e-127 458.4 404 63.4
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 1.7e-126 456.8 407 61.2
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 3.7e-126 455.7 407 61.7
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 6.3e-126 454.9 415 60.5
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 8.3e-126 454.5 391 64.7
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 1.2e-124 450.7 276 79.7
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 2.7e-124 449.5 403 62.5
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 7.7e-124 448.0 398 62.8
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 7.7e-124 448.0 298 75.8
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 1.7e-123 446.8 417 62.1
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 3.8e-123 445.7 398 62.1
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 3.8e-123 445.7 398 62.1
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 6.5e-123 444.9 401 62.1
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 2.5e-122 443.0 357 66.4
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 9.4e-122 441.0 367 65.9
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 8.0e-121 438.0 337 68.8
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 1.8e-120 436.8 383 62.7
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 8.8e-120 434.5 423 58.6
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 1.5e-119 433.7 307 71.7
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 2.0e-119 433.3 335 66.9
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 7.5e-119 431.4 328 68.3
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 4.8e-118 428.7 349 69.1
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 8.3e-118 427.9 422 58.3
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 3.3e-114 416.0 396 59.8
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 2.1e-113 413.3 374 58.6
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 6.8e-112 408.3 371 60.9
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 1.2e-111 407.5 410 55.9
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 1.5e-111 407.1 254 79.1
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 7.5e-111 404.8 281 73.0
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 3.2e-109 399.4 254 77.6
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 1.7e-107 393.7 382 62.3
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 3.9e-107 392.5 325 63.4
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 3.3e-106 389.4 322 64.9
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 2.8e-105 386.3 304 67.4
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 3.6e-105 386.0 376 58.8
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 8.0e-105 384.8 318 68.6
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 3.9e-99 365.9 337 58.5
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 4.3e-98 362.5 291 66.3
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 8.9e-96 354.8 187 95.7
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 3.0e-91 339.7 363 55.4
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 3.9e-91 339.3 263 62.4
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 1.2e-87 327.8 217 71.9
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 2.1e-84 317.0 251 61.8
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 2.7e-84 316.6 255 63.5
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 3.0e-83 313.2 305 61.6
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 4.6e-76 289.3 235 67.2
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 4.9e-62 242.7 265 54.7
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 3.5e-52 209.9 162 64.2
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 1.0e-51 208.4 256 44.5
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 3.2e-45 186.8 333 37.2
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 5.1e-43 179.5 154 64.3
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 5.1e-43 179.5 258 39.9
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.1e-29 135.2 82 76.8
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 9.4e-29 132.1 83 74.7
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 2.9e-22 110.5 74 70.3
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 2.5e-21 107.5 247 29.6
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 9.7e-18 95.5 57 75.4
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 1.1e-13 82.0 258 27.5
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 2.5e-13 80.9 226 29.2
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 2.3e-11 74.3 88 46.6
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 3.0e-11 73.9 51 76.5
MCO01G641 Micromonas commoda HOM05D006329 ORTHO05D008357 6.8e-11 72.8 233 27.0
Lalb_Chr21g0313531 Lupinus albus HOM05D006329 ORTHO05D008357 4.4e-10 70.1 107 43.0
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 1.7e-09 68.2 65 55.4


User provided reference genes

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