Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.2e-100 369.0 188 100.0
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 1.6e-95 352.8 187 95.7
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 1.6e-95 352.8 187 95.7
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.6e-95 352.8 187 95.7
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.1e-95 352.4 187 95.2
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 8.8e-94 347.1 187 94.7
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 1.9e-88 329.3 188 91.5
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 4.4e-85 318.2 192 87.5
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 5.5e-80 301.2 184 83.7
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 5.2e-78 294.7 184 81.5
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 9.1e-75 283.9 189 77.2
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 1.7e-73 279.6 194 75.3
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 2.9e-73 278.9 189 76.2
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 2.9e-73 278.9 192 75.5
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 6.5e-73 277.7 189 76.2
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 8.5e-73 277.3 189 77.2
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 1.1e-72 276.9 191 74.9
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 1.9e-72 276.2 186 76.9
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 1.9e-72 276.2 191 74.9
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 1.9e-72 276.2 191 74.9
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 2.5e-72 275.8 187 77.5
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 4.2e-72 275.0 167 81.4
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 7.2e-72 274.2 162 84.0
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 7.2e-72 274.2 189 73.5
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 7.2e-72 274.2 165 83.0
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 1.2e-71 273.5 190 74.2
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 1.6e-71 273.1 162 83.3
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 1.6e-71 273.1 189 75.1
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 1.6e-71 273.1 190 76.3
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 2.1e-71 272.7 162 82.7
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 2.1e-71 272.7 162 83.3
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 2.1e-71 272.7 194 73.2
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 6.1e-71 271.2 189 74.1
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 6.1e-71 271.2 201 72.6
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 6.1e-71 271.2 201 72.6
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 8.0e-71 270.8 201 72.6
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 1.0e-70 270.4 171 77.8
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 1.4e-70 270.0 167 79.0
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 1.4e-70 270.0 189 74.6
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 1.8e-70 269.6 190 73.7
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 1.8e-70 269.6 192 74.0
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 2.3e-70 269.2 195 75.4
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 3.0e-70 268.9 192 74.0
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 3.0e-70 268.9 190 73.2
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 4.0e-70 268.5 162 80.9
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 4.0e-70 268.5 190 72.1
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 6.8e-70 267.7 187 75.4
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 6.8e-70 267.7 197 73.6
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 8.8e-70 267.3 168 79.2
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 1.5e-69 266.5 189 73.5
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 2.0e-69 266.2 197 71.1
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 2.6e-69 265.8 174 76.4
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 2.6e-69 265.8 194 71.6
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 3.4e-69 265.4 193 71.5
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 4.4e-69 265.0 165 79.4
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 4.4e-69 265.0 199 71.9
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 9.8e-69 263.8 189 72.0
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 9.8e-69 263.8 200 70.5
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 1.3e-68 263.5 190 73.7
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 1.7e-68 263.1 193 72.0
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 2.2e-68 262.7 189 73.5
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 2.8e-68 262.3 195 70.8
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 2.8e-68 262.3 183 74.9
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 3.7e-68 261.9 187 73.3
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 4.8e-68 261.5 170 76.5
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 6.3e-68 261.2 164 81.1
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 1.1e-67 260.4 201 70.1
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 2.4e-67 259.2 189 70.4
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 3.1e-67 258.8 190 70.0
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 4.1e-67 258.5 185 70.8
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 5.4e-67 258.1 166 78.3
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 5.4e-67 258.1 187 72.2
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 9.1e-67 257.3 197 68.0
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 1.2e-66 256.9 187 69.5
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 1.6e-66 256.5 163 77.3
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 2.0e-66 256.1 190 71.1
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 2.7e-66 255.8 190 70.5
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 3.5e-66 255.4 185 70.8
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 4.5e-66 255.0 189 70.9
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 7.7e-66 254.2 152 81.6
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 7.7e-66 254.2 152 81.6
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 7.7e-66 254.2 189 68.3
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 1.0e-65 253.8 177 73.4
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 1.0e-65 253.8 164 76.2
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 1.7e-65 253.1 152 80.9
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 1.7e-65 253.1 152 80.9
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 1.7e-65 253.1 152 80.9
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 6.5e-65 251.1 202 69.3
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.5e-64 250.0 187 70.1
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 1.9e-64 249.6 185 69.2
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 2.5e-64 249.2 168 71.4
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 7.2e-64 247.7 165 72.1
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 9.5e-64 247.3 188 69.7
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 4.7e-63 245.0 200 66.0
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 2.3e-62 242.7 172 74.4
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 3.0e-62 242.3 164 73.2
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 3.4e-61 238.8 211 62.1
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 2.2e-60 236.1 197 64.0
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 2.2e-60 236.1 161 70.2
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 4.5e-58 228.4 206 64.6
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 5.9e-58 228.0 180 66.7
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 5.9e-58 228.0 186 66.7
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 1.3e-57 226.9 161 72.0
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 1.3e-57 226.9 178 68.0
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 3.6e-55 218.8 192 60.4
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 1.4e-54 216.9 163 63.8
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 2.4e-51 206.1 162 62.3
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 7.8e-50 201.1 195 60.0
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 3.9e-49 198.7 122 73.8
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 1.9e-40 169.9 140 67.1
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 1.1e-32 144.1 158 48.1
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 7.3e-32 141.4 185 50.3
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 1.3e-28 130.6 83 73.5
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 4.6e-26 122.1 146 45.9
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 2.2e-20 103.2 217 33.6
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 7.4e-08 61.6 144 30.6


User provided reference genes

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