Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 7.3e-202 707.2 414 100.0
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 1.1e-149 533.9 412 69.9
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 2.2e-145 519.6 331 76.4
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 2.8e-145 519.2 332 77.7
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 1.8e-144 516.5 331 76.1
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 4.1e-144 515.4 342 78.4
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 2.7e-143 512.7 327 76.5
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 3.5e-143 512.3 341 75.4
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 1.7e-142 510.0 331 76.1
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 1.7e-142 510.0 327 76.8
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 2.9e-142 509.2 334 73.1
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 3.8e-142 508.8 334 73.1
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 1.9e-141 506.5 334 75.1
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 3.2e-141 505.8 332 75.9
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 5.5e-141 505.0 331 74.0
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 7.2e-141 504.6 334 74.6
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 1.6e-140 503.4 336 78.9
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 4.7e-140 501.9 331 73.4
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 6.1e-140 501.5 331 78.2
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 6.1e-140 501.5 339 74.9
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 4.0e-139 498.8 333 74.5
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 4.0e-139 498.8 333 74.2
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 6.8e-139 498.0 345 72.5
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 6.8e-139 498.0 329 75.4
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 8.8e-139 497.7 331 74.0
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 1.2e-138 497.3 329 75.1
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.5e-138 496.9 345 72.2
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 1.5e-138 496.9 345 72.2
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 2.0e-138 496.5 335 75.5
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 2.0e-138 496.5 340 73.8
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 2.0e-138 496.5 336 73.5
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 3.4e-138 495.7 333 74.2
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 9.8e-138 494.2 331 73.7
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 2.8e-137 492.7 332 73.2
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 4.9e-137 491.9 344 74.7
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 6.3e-137 491.5 344 74.1
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.4e-136 490.3 333 73.6
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 2.4e-136 489.6 341 73.0
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 5.4e-136 488.4 343 75.2
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 5.4e-136 488.4 328 75.0
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 7.7e-135 484.6 328 75.9
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 2.9e-134 482.6 345 73.0
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 2.9e-134 482.6 324 73.1
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 5.0e-134 481.9 337 74.8
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 8.6e-134 481.1 328 72.9
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 1.5e-133 480.3 328 75.3
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 1.9e-133 479.9 342 73.7
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 2.8e-132 476.1 311 75.9
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 3.6e-132 475.7 338 74.9
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 3.6e-132 475.7 339 75.5
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 4.7e-132 475.3 338 74.6
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 4.7e-132 475.3 332 70.8
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 1.0e-131 474.2 335 75.2
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 1.4e-131 473.8 331 72.5
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 1.4e-131 473.8 336 75.0
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 1.4e-131 473.8 336 75.0
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 4.0e-131 472.2 339 69.9
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 4.0e-131 472.2 335 70.4
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 6.8e-131 471.5 328 70.7
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.5e-130 470.3 338 71.0
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 7.5e-130 468.0 328 68.6
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 1.7e-129 466.8 331 70.1
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 2.9e-129 466.1 272 82.4
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 4.9e-129 465.3 299 76.3
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 6.4e-129 464.9 329 69.9
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 5.4e-128 461.8 330 69.1
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 7.8e-127 458.0 346 71.4
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 6.6e-126 454.9 328 67.4
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 8.6e-126 454.5 272 79.4
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 1.5e-125 453.8 323 70.3
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 1.6e-124 450.3 310 72.9
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 1.6e-124 450.3 270 80.7
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 2.1e-124 449.9 309 71.8
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 4.7e-124 448.7 336 67.0
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 6.2e-124 448.4 305 71.8
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 1.4e-123 447.2 336 66.7
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 2.3e-123 446.4 294 73.8
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 3.1e-123 446.0 345 70.7
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 8.9e-123 444.5 328 68.0
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 2.6e-122 443.0 329 68.1
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 2.6e-122 443.0 315 72.1
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 5.0e-118 428.7 255 80.8
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 5.0e-118 428.7 351 67.8
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 8.6e-118 427.9 310 67.1
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 1.1e-117 427.6 308 69.2
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 1.6e-116 423.7 251 79.7
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 2.8e-116 422.9 286 71.7
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 2.8e-116 422.9 343 63.3
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 1.4e-115 420.6 293 70.0
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 1.2e-114 417.5 411 56.9
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.3e-113 414.1 330 65.2
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 5.4e-112 408.7 248 77.8
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 6.0e-111 405.2 331 65.3
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 2.3e-110 403.3 323 64.7
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.9e-109 400.2 308 67.9
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 3.2e-104 382.9 237 78.1
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 8.6e-102 374.8 309 69.3
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 1.5e-101 374.0 251 77.7
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 1.5e-98 364.0 317 61.2
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 1.3e-97 360.9 304 59.9
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 5.6e-93 345.5 210 77.6
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 1.6e-92 344.0 265 61.9
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 1.8e-91 340.5 299 61.9
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 3.5e-87 326.2 254 63.4
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 4.6e-87 325.9 223 76.2
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 9.0e-83 311.6 252 60.7
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 2.1e-76 290.4 224 67.0
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.6e-68 264.2 164 81.1
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.5e-66 257.7 237 59.5
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 4.8e-52 209.5 162 63.0
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 2.9e-49 200.3 257 43.6
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 1.2e-47 194.9 114 81.6
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 1.1e-45 188.3 324 37.7
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 2.6e-42 177.2 253 40.7
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 4.0e-30 136.7 81 76.5
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 1.6e-26 124.8 83 68.7
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 2.3e-25 120.9 247 28.7
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 2.8e-23 114.0 74 71.6
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 5.4e-19 99.8 57 77.2
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 1.1e-16 92.0 249 28.9
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 4.0e-14 83.6 88 51.1
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 6.8e-14 82.8 53 67.9
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 8.3e-12 75.9 260 26.5
MCO01G641 Micromonas commoda HOM05D006329 ORTHO05D008357 9.2e-11 72.4 236 28.0
Lalb_Chr21g0313531 Lupinus albus HOM05D006329 ORTHO05D008357 3.0e-09 67.4 104 58.7
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 3.9e-09 67.0 51 64.7


User provided reference genes

Program Settings