Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 8.7e-243 843.6 549 100.0
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 1.1e-181 640.6 548 74.5
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 5.8e-178 628.2 549 69.6
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 1.3e-177 627.1 548 71.4
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 3.7e-177 625.5 548 73.4
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 8.3e-177 624.4 524 84.5
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 4.6e-175 618.6 553 71.6
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 4.6e-175 618.6 550 70.4
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.0e-174 617.5 550 70.5
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 1.1e-173 614.0 545 68.3
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 1.9e-173 613.2 548 70.3
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 3.6e-172 609.0 547 72.0
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 2.3e-171 606.3 551 69.9
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 2.3e-171 606.3 548 67.3
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 4.0e-171 605.5 549 67.4
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.2e-169 599.7 535 72.3
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 2.4e-168 596.3 551 67.2
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 7.0e-168 594.7 551 68.8
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 2.1e-167 593.2 546 70.1
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.3e-166 590.5 547 70.0
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.7e-166 590.1 588 68.5
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.7e-166 590.1 588 68.5
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 5.1e-166 588.6 547 69.7
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 1.5e-165 587.0 555 67.6
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 4.3e-165 585.5 549 63.4
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 7.3e-165 584.7 552 70.1
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 1.6e-164 583.6 560 68.9
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 4.7e-164 582.0 549 71.2
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 2.0e-162 576.6 549 65.4
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 7.5e-162 574.7 550 68.7
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 2.2e-161 573.2 563 67.0
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 1.1e-160 570.9 549 70.9
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 1.4e-160 570.5 563 67.1
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 9.2e-160 567.8 550 64.5
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 2.7e-159 566.2 561 73.4
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 6.0e-159 565.1 583 65.5
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 1.0e-158 564.3 543 64.5
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.3e-158 563.9 534 70.0
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.3e-158 563.9 551 64.4
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 1.3e-158 563.9 533 69.8
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 8.6e-158 561.2 561 73.1
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 1.5e-157 560.5 563 72.6
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 2.5e-157 559.7 557 67.3
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 5.6e-157 558.5 551 68.6
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 1.2e-156 557.4 549 65.8
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 3.6e-156 555.8 549 68.5
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 1.4e-155 553.9 495 77.4
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 2.4e-155 553.1 561 73.1
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 2.4e-155 553.1 561 66.5
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 2.4e-155 553.1 547 64.5
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 4.0e-155 552.4 510 72.0
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 1.2e-154 550.8 559 68.9
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 1.5e-154 550.4 551 62.8
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 3.4e-154 549.3 572 65.2
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 4.4e-154 548.9 549 69.0
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 3.8e-153 545.8 565 64.6
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 4.9e-153 545.4 562 65.8
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 4.9e-153 545.4 543 63.5
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 1.1e-152 544.3 510 71.0
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 1.2e-151 540.8 492 73.2
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 6.6e-150 535.0 543 64.6
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 4.3e-149 532.3 549 67.4
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 2.8e-148 529.6 553 66.7
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 5.3e-147 525.4 556 63.8
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 6.9e-147 525.0 549 61.6
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 1.1e-144 517.7 545 62.0
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 2.4e-144 516.5 557 61.6
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 1.2e-143 514.2 554 65.7
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 3.5e-143 512.7 559 63.9
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 4.6e-143 512.3 552 68.5
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 6.0e-143 511.9 517 68.3
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 1.0e-142 511.1 503 61.4
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 1.5e-141 507.3 552 64.7
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 1.6e-140 503.8 582 61.7
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 2.1e-140 503.4 580 58.1
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.1e-139 501.1 547 55.8
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 2.6e-138 496.5 551 62.8
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 1.7e-137 493.8 553 67.6
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 6.4e-137 491.9 358 76.8
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 8.4e-137 491.5 555 67.4
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 8.4e-137 491.5 555 67.4
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 4.2e-136 489.2 558 54.7
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 4.2e-136 489.2 543 61.0
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 5.4e-136 488.8 554 67.0
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 9.3e-136 488.0 592 57.3
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 1.3e-134 484.2 553 66.9
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 1.8e-134 483.8 544 64.2
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 2.3e-134 483.4 555 66.5
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 2.5e-133 479.9 551 61.5
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 7.4e-133 478.4 551 63.5
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 4.8e-132 475.7 567 62.8
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 1.4e-131 474.2 552 58.3
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 1.8e-131 473.8 553 52.8
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 3.4e-130 469.5 544 56.1
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 4.5e-130 469.2 546 67.9
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 5.8e-130 468.8 566 57.4
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 1.7e-129 467.2 555 63.6
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 3.8e-129 466.1 520 63.1
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 3.8e-129 466.1 521 63.0
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 2.5e-128 463.4 552 61.2
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 9.3e-128 461.5 566 53.2
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.3e-126 457.6 592 52.2
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 1.5e-125 454.1 554 59.9
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 7.4e-125 451.8 562 61.4
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.1e-123 448.0 583 55.4
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 1.4e-123 447.6 843 41.5
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 6.9e-123 445.3 552 60.0
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 2.9e-121 439.9 493 60.4
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 3.8e-121 439.5 549 58.5
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 1.2e-119 434.5 553 51.0
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 1.8e-118 430.6 468 62.8
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 6.7e-118 428.7 553 58.2
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 4.8e-116 422.5 567 53.6
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 6.3e-116 422.2 541 61.6
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 6.3e-116 422.2 541 61.6
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 2.4e-115 420.2 552 58.0
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 2.2e-113 413.7 475 66.3
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 3.6e-111 406.4 516 52.7
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 4.5e-106 389.4 546 56.8
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.2e-103 381.3 570 47.7
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 3.0e-102 376.7 551 52.6
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 1.3e-100 371.3 452 63.5
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 2.4e-99 367.1 325 63.7
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 5.9e-98 362.5 420 66.0
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 5.9e-98 362.5 561 43.1
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 1.1e-96 358.2 565 48.0
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 5.2e-94 349.4 559 48.8
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 5.0e-89 332.8 560 42.3
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 3.2e-88 330.1 566 44.0
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 4.2e-88 329.7 562 44.1
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 2.7e-87 327.0 372 66.1
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 3.6e-87 326.6 555 44.5
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 8.0e-87 325.5 560 42.3
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 1.4e-86 324.7 433 50.1
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 6.8e-86 322.4 562 43.6
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 6.8e-86 322.4 555 44.3
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 2.8e-84 317.0 326 73.9
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 9.1e-83 312.0 526 52.1
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 1.8e-78 297.7 366 53.0
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 5.7e-77 292.7 194 72.2
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 1.7e-76 291.2 371 68.2
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 2.0e-69 267.7 310 57.4
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 8.0e-63 245.7 302 58.6
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 4.9e-60 236.5 334 44.6
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 4.9e-60 236.5 377 58.9
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.4e-51 208.4 223 57.8
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 5.6e-48 196.4 523 36.5
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 9.9e-45 185.7 181 73.5
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 1.5e-40 171.8 178 77.5
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 7.1e-35 152.9 249 41.4
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 5.3e-30 136.7 99 65.7
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.6e-23 115.2 102 71.6
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 1.4e-22 112.1 262 35.9
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 7.6e-21 106.3 313 30.0
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 2.2e-20 104.8 213 49.3
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 2.2e-20 104.8 215 41.9
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 6.4e-20 103.2 56 91.1
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.2e-18 99.0 106 55.7
AagrBONN_evm.TU.Sc2ySwM_228.3786 Anthoceros agrestis HOM05D003850 ORTHO05D004515 2.1e-18 98.2 140 37.9
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 1.1e-16 92.4 73 67.1
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 1.1e-16 92.4 73 67.1
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.9e-16 91.7 94 55.3
Nitab4.5_0006771g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 3.7e-15 87.4 96 54.2
VMungo0720G0179 Vigna mungo HOM05D003850 ORTHO05D004515 3.7e-15 87.4 51 76.5
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 6.2e-15 86.7 117 47.9
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 1.5e-13 82.0 76 60.5
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 1.3e-12 79.0 63 60.3
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 3.8e-12 77.4 147 38.8
Eucgr.A01650 Eucalyptus grandis HOM05D002251 ORTHO05D004515 1.9e-11 75.1 55 60.0
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 2.5e-11 74.7 215 33.0
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 4.2e-11 73.9 58 60.3
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis HOM05D003850 ORTHO05D004515 1.2e-10 72.4 261 31.8
FAN21G0780 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.3e-09 68.2 217 38.2
arahy.Tifrunner.gnm1.ann1.GFC3N0 Arachis hypogaea HOM05D003850 ORTHO05D004515 5.1e-09 67.0 57 59.6
CARHR253550 Cardamine hirsuta HOM05D003850 ORTHO05D004515 8.7e-09 66.2 64 54.7
Aa31LG9G10030 Aethionema arabicum HOM05D003850 ORTHO05D004515 1.3e-07 62.4 54 59.3
CBR_g38329 Chara braunii HOM05D003850 ORTHO05D004515 1.1e-06 59.3 90 33.3
SEGI_19210 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 2.4e-06 58.2 130 26.9


User provided reference genes

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