Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35735 Davidia involucrata HOM05D000113 ORTHO05D001798 2.3e-57 225.3 111 100.0
CiPaw.07G120200 Carya illinoinensis HOM05D000113 ORTHO05D001798 8.2e-15 84.0 47 76.6
Aqoxy5G02706 Aquilegia oxysepala HOM05D000113 ORTHO05D001798 4.1e-14 81.6 52 73.1
EL10As5g23574 Beta vulgaris HOM05D000113 ORTHO05D001798 4.1e-14 81.6 52 73.1
CANSAT25G2382 Cannabis sativa HOM05D000113 ORTHO05D001798 4.1e-14 81.6 52 73.1
Cpa.g.sc18.90 Carica papaya HOM05D000113 ORTHO05D001798 4.1e-14 81.6 52 73.1
CDE02G3406 Ceratophyllum demersum HOM05D000113 ORTHO05D001798 4.1e-14 81.6 52 73.1
CDE09G1424 Ceratophyllum demersum HOM05D000113 ORTHO05D001798 4.1e-14 81.6 52 71.2
AUR62011762 Chenopodium quinoa HOM05D000113 ORTHO05D001798 4.1e-14 81.6 52 73.1
AUR62024608 Chenopodium quinoa HOM05D000113 ORTHO05D001798 4.1e-14 81.6 52 73.1
ECA247G4117 Erigeron canadensis HOM05D000113 ORTHO05D001798 4.1e-14 81.6 52 73.1
Lsat_1_v5_gn_9_2021 Lactuca sativa HOM05D000113 ORTHO05D001798 4.1e-14 81.6 52 73.1
MD17G1278600 Malus domestica HOM05D000113 ORTHO05D001798 4.1e-14 81.6 52 73.1
Nn3g21785 Nelumbo nucifera HOM05D000113 ORTHO05D001798 4.1e-14 81.6 47 74.5
Nn4g25530 Nelumbo nucifera HOM05D000113 ORTHO05D001798 4.1e-14 81.6 52 73.1
PSO170G5018 Papaver somniferum HOM05D000113 ORTHO05D001798 4.1e-14 81.6 52 73.1
PSO357G0680 Papaver somniferum HOM05D000113 ORTHO05D001798 4.1e-14 81.6 52 73.1
TAR636G1017 Trochodendron aralioides HOM05D000113 ORTHO05D001798 4.1e-14 81.6 53 69.8
Ah.02g112530 Amaranthus hybridus HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
CAN.G293.10 Capsicum annuum HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Ca_10267_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
COL.COLO4_23195 Corchorus olitorius HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
CsaV3_7G030160 Cucumis sativus L. HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Dinv10125 Davidia involucrata HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Duzib138G0646 Durio zibethinus HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Migut.D00061 Erythranthe guttata HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
FvH4_1g26860 Fragaria vesca HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
FAN19G2799 Fragaria x ananassa HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
FAN23G3030 Fragaria x ananassa HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
FAN26G3197 Fragaria x ananassa HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
FAN28G1863 Fragaria x ananassa HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
FAN28G2361 Fragaria x ananassa HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Glyma.19G218200 Glycine max HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Gohir.A12G123300 Gossypium hirsutum HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Gohir.D12G126900 Gossypium hirsutum HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Gorai.008G137800 Gossypium raimondii HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
HanXRQChr10g0284841 Helianthus annuus HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Lj5g0022853 Lotus japonicus HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Medtr1g086640 Medicago truncatula HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Nitab4.5_0000222g0100 Nicotiana tabacum HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Peaxi162Scf00770g00115 Petunia axillaris HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Phvul.001G214700 Phaseolus vulgaris HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Prupe.3G007400 Prunus persica HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
RcHm_v2.0_Chr3g0487101 Rosa chinensis HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
SalBow3G2309 Salvia bowleyana HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Hund09659 Selenicereus undatus HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Solyc01g079250.3 Solanum lycopersicum HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
PGSC0003DMG400009019 Solanum tuberosum HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Thecc.01G317900 Theobroma cacao HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
VMungo0720G3092 Vigna mungo HOM05D000113 ORTHO05D001798 5.3e-14 81.3 52 71.2
Atru.chr5.949 Acer truncatum HOM05D000113 ORTHO05D001798 6.9e-14 80.9 47 78.7
ATR0580G086 Amborella trichopoda HOM05D000113 ORTHO05D001798 6.9e-14 80.9 47 78.7
Ciclev10019038m.g Citrus clementina HOM05D000113 ORTHO05D001798 6.9e-14 80.9 47 78.7
Cc06_g21350 Coffea canephora HOM05D000113 ORTHO05D001798 6.9e-14 80.9 47 78.7
MBI19_g03272_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D001798 6.9e-14 80.9 47 78.7
Sc17g0000280 Simmondsia chinensis HOM05D000113 ORTHO05D001798 6.9e-14 80.9 47 78.7
SGA_v2.0_scaffold376G50300 Striga asiatica HOM05D003220 ORTHO05D001798 6.9e-14 80.9 52 69.2
TAR633G1846 Trochodendron aralioides HOM05D000113 ORTHO05D001798 6.9e-14 80.9 52 69.2
GSVIVG01028153001 Vitis vinifera HOM05D000113 ORTHO05D001798 6.9e-14 80.9 47 78.7
Aa31LG10G16250 Aethionema arabicum HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
Aqoxy2G02659 Aquilegia oxysepala HOM05D000113 ORTHO05D001798 9.0e-14 80.5 52 71.2
AL2G23490 Arabidopsis lyrata HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
AL5G45070 Arabidopsis lyrata HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
AT3G62310 Arabidopsis thaliana HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
MSTRG.21706 Avicennia marina HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
Carub.0005s2903 Capsella rubella HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
CARHR172650 Cardamine hirsuta HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
Cfa005756 Carpinus fangiana HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
CiPaw.08G087200 Carya illinoinensis HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
Duzib133G0211 Durio zibethinus HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
Thhalv10005810m.g Eutrema salsugineum HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
Glyma.02G010500 Glycine max HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
Glyma.03G221200 Glycine max HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
Oeu044738.3 Olea europaea HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
Psat6g160840 Pisum sativum HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
QL12p018947 Quercus lobata HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
Sp5g01080 Schrenkiella parvula HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
THA.LOC104801312 Tarenaya hassleriana HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
TWI59G0421 Tripterygium wilfordii HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
HPP92_015246 Vanilla planifolia HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
VMungo1383G0462 Vigna mungo HOM05D000113 ORTHO05D001798 9.0e-14 80.5 47 76.6
Actinidia17921 Actinidia chinensis HOM05D000113 ORTHO05D001798 1.2e-13 80.1 52 71.2
Actinidia21375 Actinidia chinensis HOM05D000113 ORTHO05D001798 1.2e-13 80.1 52 71.2
CSS0009529 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D001798 1.2e-13 80.1 52 71.2
DCAR_005742 Daucus carota HOM05D000113 ORTHO05D001798 1.5e-13 79.7 47 76.6
Lj1C14G13 Lonicera japonica HOM05D000113 ORTHO05D001798 1.5e-13 79.7 40 90.0
unitig_0.g287 Utricularia gibba HOM05D000113 ORTHO05D001798 1.5e-13 79.7 52 71.2
AL4G46820 Arabidopsis lyrata HOM05D000113 ORTHO05D001798 2.0e-13 79.3 47 74.5
AT2G47250 Arabidopsis thaliana HOM05D000113 ORTHO05D001798 2.0e-13 79.3 47 74.5
BcaC07g40716 Brassica carinata HOM05D000113 ORTHO05D001798 2.0e-13 79.3 47 74.5
BcaC07g42743 Brassica carinata HOM05D000113 ORTHO05D001798 2.0e-13 79.3 47 74.5
BcaC07g42746 Brassica carinata HOM05D000113 ORTHO05D001798 2.0e-13 79.3 47 74.5
C08p37190 Brassica napus HOM05D000113 ORTHO05D001798 2.0e-13 79.3 47 74.5
BolC8t51296H Brassica oleracea HOM05D000113 ORTHO05D001798 2.0e-13 79.3 47 74.5
CARHR142650 Cardamine hirsuta HOM05D000113 ORTHO05D001798 2.0e-13 79.3 53 71.7
Manes.01G230500 Manihot esculenta HOM05D000113 ORTHO05D001798 2.0e-13 79.3 52 69.2
SalBow3G2721 Salvia bowleyana HOM05D000113 ORTHO05D001798 2.0e-13 79.3 52 69.2
SEGI_02155 Sequoiadendron giganteum HOM05D000113 ORTHO05D001798 2.0e-13 79.3 47 74.5
arahy.Tifrunner.gnm1.ann1.GWA1LV Arachis hypogaea HOM05D000113 ORTHO05D001798 2.6e-13 79.0 47 74.5
arahy.Tifrunner.gnm1.ann1.WF8RVZ Arachis hypogaea HOM05D000113 ORTHO05D001798 2.6e-13 79.0 47 74.5
Lj1g0014863 Lotus japonicus HOM05D000113 ORTHO05D001798 2.6e-13 79.0 52 69.2
Rhsim13G0002600 Rhododendron simsii HOM05D000113 ORTHO05D001798 2.6e-13 79.0 52 69.2
TAR362G0120 Trochodendron aralioides HOM05D000113 ORTHO05D001798 2.6e-13 79.0 47 76.6
BcaC01g05039 Brassica carinata HOM05D000113 ORTHO05D001798 3.4e-13 78.6 47 74.5
C03p30870 Brassica napus HOM05D000113 ORTHO05D001798 3.4e-13 78.6 47 74.5
BolC3t15439H Brassica oleracea HOM05D000113 ORTHO05D001798 3.4e-13 78.6 47 74.5
Dinv33137 Davidia involucrata HOM05D000113 ORTHO05D001798 3.4e-13 78.6 58 65.5
Prupe.2G114500 Prunus persica HOM05D000113 ORTHO05D001798 3.4e-13 78.6 47 70.2
PGR083G2294 Punica granatum HOM05D000113 ORTHO05D001798 3.4e-13 78.6 47 76.6
Sed0019361 Sechium edule HOM05D000113 ORTHO05D001798 3.4e-13 78.6 47 74.5
TWI14G0282 Tripterygium wilfordii HOM05D000113 ORTHO05D001798 3.4e-13 78.6 52 69.2
vmacro15100 Vaccinium macrocarpon HOM05D000113 ORTHO05D001798 3.4e-13 78.6 41 85.4
Zm00001eb395790 Zea mays HOM05D000113 ORTHO05D001798 3.4e-13 78.6 47 72.3
Ah.11g049060 Amaranthus hybridus HOM05D000113 ORTHO05D001798 4.5e-13 78.2 52 69.2
A03p25890 Brassica napus HOM05D000113 ORTHO05D001798 4.5e-13 78.2 47 72.3
BraA03t11805Z Brassica rapa HOM05D000113 ORTHO05D001798 4.5e-13 78.2 47 72.3
Eucgr.H00916 Eucalyptus grandis HOM05D000113 ORTHO05D001798 4.5e-13 78.2 52 69.2
Lalb_Chr18g0046561 Lupinus albus HOM05D000113 ORTHO05D001798 4.5e-13 78.2 52 67.3
MD09G1286000 Malus domestica HOM05D000113 ORTHO05D001798 4.5e-13 78.2 47 74.5
Lj8C411G3 Lonicera japonica HOM05D000113 ORTHO05D001798 5.9e-13 77.8 41 85.4
Lalb_Chr04g0260021 Lupinus albus HOM05D000113 ORTHO05D001798 7.6e-13 77.4 52 67.3
Sabra02G0163400 Salix brachista HOM05D000113 ORTHO05D001798 1.0e-12 77.0 47 70.2
vmacro15101 Vaccinium macrocarpon HOM05D000113 ORTHO05D001798 1.3e-12 76.6 64 59.4
arahy.Tifrunner.gnm1.ann1.4I2ZCD Arachis hypogaea HOM05D000113 ORTHO05D001798 1.7e-12 76.3 52 67.3
arahy.Tifrunner.gnm1.ann1.L7YJN9 Arachis hypogaea HOM05D000113 ORTHO05D001798 1.7e-12 76.3 52 67.3
CSS0000869 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D001798 1.7e-12 76.3 48 75.0
CSS0045596 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D001798 1.7e-12 76.3 48 75.0
Haze_05077 Corylus avellana HOM05D000113 ORTHO05D001798 1.7e-12 76.3 46 76.1
Potri.014G117900 Populus trichocarpa HOM05D000113 ORTHO05D001798 1.7e-12 76.3 52 65.4
SEGI_06074 Sequoiadendron giganteum HOM05D000113 ORTHO05D001798 1.7e-12 76.3 47 74.5
TPR.G27315 Trifolium pratense HOM05D000113 ORTHO05D001798 1.7e-12 76.3 45 75.6
HPP92_010036 Vanilla planifolia HOM05D000113 ORTHO05D028520 1.7e-12 76.3 46 76.1
THA.LOC104802144 Tarenaya hassleriana HOM05D000113 ORTHO05D001798 2.2e-12 75.9 52 67.3
A09p54310 Brassica napus HOM05D000113 ORTHO05D001798 2.9e-12 75.5 47 70.2
BraA09t40843Z Brassica rapa HOM05D000113 ORTHO05D001798 2.9e-12 75.5 47 70.2
HanXRQChr15g0465091 Helianthus annuus HOM05D000113 ORTHO05D001798 2.9e-12 75.5 52 67.3
AL6G25680 Arabidopsis lyrata HOM05D000113 ORTHO05D001798 3.8e-12 75.1 41 78.0
AT5G14900 Arabidopsis thaliana HOM05D000113 ORTHO05D001798 3.8e-12 75.1 41 78.0
BcaB02g07032 Brassica carinata HOM05D000113 ORTHO05D001798 3.8e-12 75.1 56 60.7
BcaB02g07036 Brassica carinata HOM05D000113 ORTHO05D001798 3.8e-12 75.1 56 60.7
Thhalv10016061m.g Eutrema salsugineum HOM05D000113 ORTHO05D001798 3.8e-12 75.1 41 78.0
Mapoly0001s0447 Marchantia polymorpha HOM05D000113 ORTHO05D001798 5.0e-12 74.7 88 48.9
Rhsim06G0057400 Rhododendron simsii HOM05D000113 ORTHO05D001798 6.5e-12 74.3 46 73.9
CSS0048914 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D001798 8.5e-12 73.9 41 80.5
QL04p067238 Quercus lobata HOM05D000113 ORTHO05D001798 8.5e-12 73.9 47 68.1
CARHR053460 Cardamine hirsuta HOM05D000113 ORTHO05D001798 1.1e-11 73.6 41 75.6
TPR.G27841 Trifolium pratense HOM05D000113 ORTHO05D001798 1.1e-11 73.6 53 64.2
Medtr3g052610 Medicago truncatula HOM05D000113 ORTHO05D001798 1.4e-11 73.2 54 63.0
RcHm_v2.0_Chr6g0286781 Rosa chinensis HOM05D000113 ORTHO05D001798 1.4e-11 73.2 48 70.8
Pp3c24_1890 Physcomitrium patens HOM05D000113 ORTHO05D001798 1.9e-11 72.8 47 68.1
Pp3s62_110 Physcomitrium patens HOM05D000113 ORTHO05D001798 1.9e-11 72.8 47 68.1
Pp3c23_12820 Physcomitrium patens HOM05D000113 ORTHO05D001798 3.2e-11 72.0 47 66.0
Actinidia20976 Actinidia chinensis HOM05D000113 ORTHO05D001798 5.5e-11 71.2 46 69.6
A07p28740 Brassica napus HOM05D000113 ORTHO05D001798 5.5e-11 71.2 41 75.6
BraA07t30514Z Brassica rapa HOM05D000113 ORTHO05D001798 5.5e-11 71.2 41 75.6
CDE08G1490 Ceratophyllum demersum HOM05D000113 ORTHO05D001798 7.2e-11 70.9 75 50.7
Carub.0006s1305 Capsella rubella HOM05D000113 ORTHO05D001798 9.4e-11 70.5 41 75.6
Sabra14G0087400 Salix brachista HOM05D000113 ORTHO05D001798 9.4e-11 70.5 52 61.5
CARHR198440 Cardamine hirsuta HOM05D000113 ORTHO05D001798 1.6e-10 69.7 41 73.2
Lsat_1_v5_gn_1_105061 Lactuca sativa HOM05D000113 ORTHO05D001798 1.6e-10 69.7 45 71.1
CSS0031384 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D001798 2.1e-10 69.3 40 80.0
CBR_g10914 Chara braunii HOM05D000113 ORTHO05D001798 2.1e-10 69.3 41 70.7
CSS0008932 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D001798 2.7e-10 68.9 63 58.7
FvH4_2g20600 Fragaria vesca HOM05D000113 ORTHO05D001798 2.7e-10 68.9 48 66.7
CARHR069030 Cardamine hirsuta HOM05D000113 ORTHO05D001798 4.6e-10 68.2 41 75.6
ECA248G0894 Erigeron canadensis HOM05D000113 ORTHO05D001798 4.6e-10 68.2 46 71.7
Medtr4g485610 Medicago truncatula HOM05D000113 ORTHO05D001798 6.1e-10 67.8 52 59.6
Hma1.2p1_0408F.1_g146490 Hydrangea macrophylla HOM05D000113 ORTHO05D001798 1.0e-09 67.0 39 76.9
Hma1.2p1_3252F.1_g334520 Hydrangea macrophylla HOM05D000113 ORTHO05D001798 1.0e-09 67.0 39 76.9
Thhalv10015658m.g Eutrema salsugineum HOM05D000113 ORTHO05D001798 2.3e-09 65.9 40 72.5
PRCOL_00002899 Prasinoderma coloniale HOM05D000113 ORTHO05D001798 5.1e-09 64.7 39 69.2
CSS0003583 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D001798 3.3e-08 62.0 46 63.0
vmacro02383 Vaccinium macrocarpon HOM05D000113 ORTHO05D001798 4.3e-08 61.6 36 80.6
MCO01G005 Micromonas commoda HOM05D000113 ORTHO05D001798 2.2e-07 59.3 47 51.1
Cre03.g182950 Chlamydomonas reinhardtii HOM05D000113 ORTHO05D001798 6.9e-06 54.3 33 66.7
TPR.G21051 Trifolium pratense HOM05D000113 ORTHO05D001798 9.1e-06 53.9 30 80.0


User provided reference genes

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