Gene: Nitab4.5_0000222g0100

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0000222g0100
  • Transcript Identifier Nitab4.5_0000222g0100.1
  • Gene Type Coding gene
  • Location Nitab4.5_0000222 : 393651-399224 : positive

Gene Family Information

  • ID HOM05D000113
  • #Genes/#Species 2932/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0000222g0100.1
  • SR1-identifier Nta02g11050.1

Descriptions

  • Description Helicase-associated domain, Helicase, C-terminal, Helicase, superfamily 1/2, ATP-binding domain, Domain of unknown function DUF1605, P-loop containing nucleoside triphosphate hydrolase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc01g079250.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003724
IEA
InterProRNA helicase activity
GO:0005524
IEA
InterProATP binding
GO:0004386
IEA
InterProhelicase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G47250

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT2G47250
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G62310
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G62310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044756 DHX15, DEXH-box helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR003593 AAA+ ATPase domain
IPR011709 Domain of unknown function DUF1605
IPR001650 Helicase, C-terminal
IPR007502 Helicase-associated domain
Mapman id Description
16.2.7.3.3 RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.Intron-Lariat Spliceosome (ILS) complex.helicase component Prp43