Gene: FvH4_2g20600
General Information
Structural Information
- Species Fragaria vesca
- Gene Identifier FvH4_2g20600
- Transcript Identifier FvH4_2g20600.t1
- Gene Type Coding gene
- Location Fvb2 : 17260547-17262655 : positive
Gene Family Information
- ID HOM05D000113
- #Genes/#Species 2932/100
- Phylogenetic origin
- ID ORTHO05D001798
- #Genes/#Species 354/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id FvH4_2g20600.v4.0.a2
- pacid 50654647
Descriptions
- Description K12820 - pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 (DHX15, PRP43)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004386 | IEA | InterPro | helicase activity | |
| GO:0003724 | IEA | InterPro | RNA helicase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR011709 | Domain of unknown function DUF1605 |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR007502 | Helicase-associated domain |
| IPR044756 | DHX15, DEXH-box helicase domain |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR001650 | Helicase, C-terminal |
| Mapman id | Description |
|---|---|
| 16.2.7.3.3 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.Intron-Lariat Spliceosome (ILS) complex.helicase component Prp43 |