Gene: SGA_v2.0_scaffold376G50300

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold376G50300
  • Transcript Identifier SGA_v2.0_scaffold376T50300
  • Gene Type Coding gene
  • Location scaffold376 : 224181-232053 : positive

Gene Family Information

  • ID HOM05D003220
  • #Genes/#Species 212/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product ATP-dependent RNA helicase, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006526
IEA
InterProarginine biosynthetic process
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc01g079250.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004055
IEA
InterProargininosuccinate synthase activity
GO:0005524
IEA
InterProATP binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003724
IEA
InterProRNA helicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G47250

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G24830
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G24830
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT2G47250
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G62310
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G62310
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT4G24830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023434 Argininosuccinate synthase, type 1 subfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001518 Argininosuccinate synthase
IPR011545 DEAD/DEAH box helicase domain
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR001650 Helicase, C-terminal
IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body
IPR044756 DHX15, DEXH-box helicase domain
IPR011709 Domain of unknown function DUF1605
IPR007502 Helicase-associated domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
16.2.7.3.3 RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.Intron-Lariat Spliceosome (ILS) complex.helicase component Prp43
4.1.1.1.2.3 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.argininosuccinate synthetase