Gene: Lsat_1_v5_gn_1_105061

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_1_105061
  • Transcript Identifier Lsat_1_v5_gn_1_105061.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_1 : 142731617-142737205 : positive

Gene Family Information

  • ID HOM05D000113
  • #Genes/#Species 2932/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_1_105061.v5
  • pacid 38945403

Descriptions

  • Description PF04408//PF07717 - Helicase associated domain (HA2) (HA2) // Oligonucleotide/oligosaccharide-binding (OB)-fold (OB_NTP_bind)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004386
IEA
InterProhelicase activity
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D000113

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007502 Helicase-associated domain
IPR001650 Helicase, C-terminal
IPR011709 Domain of unknown function DUF1605
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
16.2.7.3.3 RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.Intron-Lariat Spliceosome (ILS) complex.helicase component Prp43