Gene: CSS0009529
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0009529
- Transcript Identifier CSS0009529.1
- Gene Type Coding gene
- Location Contig1062 : 116734-123441 : positive
Gene Family Information
- ID HOM05D000113
- #Genes/#Species 2932/100
- Phylogenetic origin
- ID ORTHO05D001798
- #Genes/#Species 354/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CSS0009529.1
Descriptions
- Description PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc01g079250.3 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004386 | IEA | InterPro | helicase activity | |
GO:0003724 | IEA | InterPro | RNA helicase activity | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G47250 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT2G47250 |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G62310 |
GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT3G62310 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR007502 | Helicase-associated domain |
IPR044756 | DHX15, DEXH-box helicase domain |
IPR001650 | Helicase, C-terminal |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
IPR011709 | Domain of unknown function DUF1605 |
IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
IPR011545 | DEAD/DEAH box helicase domain |
Mapman id | Description |
---|---|
16.2.7.3.3 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.Intron-Lariat Spliceosome (ILS) complex.helicase component Prp43 |