Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 4.2e-265 917.5 480 100.0
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 2.0e-195 686.0 470 78.3
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 1.1e-193 680.2 481 76.3
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 2.7e-187 659.1 487 73.5
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 4.2e-185 651.7 486 72.8
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 2.3e-183 646.0 470 75.1
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 9.8e-182 640.6 514 70.0
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 3.9e-178 628.6 464 74.4
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 6.6e-178 627.9 488 70.5
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 1.2e-176 623.6 491 69.7
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.6e-176 623.2 473 72.7
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 5.8e-174 614.8 457 74.4
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 1.7e-173 613.2 483 69.6
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 3.7e-173 612.1 488 69.5
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 2.3e-170 602.8 489 68.3
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 8.6e-170 600.9 466 72.3
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 2.5e-169 599.4 481 69.2
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 1.2e-168 597.0 483 68.5
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 2.8e-168 595.9 484 67.4
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 6.2e-168 594.7 484 68.2
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 1.4e-167 593.6 480 66.2
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 3.4e-166 589.0 446 73.5
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 5.8e-166 588.2 464 70.7
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 7.5e-166 587.8 457 71.3
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 1.3e-165 587.0 451 70.7
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 2.2e-165 586.3 454 70.3
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.6e-163 580.1 449 70.8
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 7.8e-163 577.8 452 70.4
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.7e-162 576.6 455 70.8
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 1.7e-162 576.6 472 67.2
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 2.3e-162 576.2 475 68.8
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 6.6e-162 574.7 466 68.0
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 8.6e-162 574.3 449 71.0
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 1.5e-161 573.5 464 66.8
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 1.2e-160 570.5 487 66.1
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 8.9e-159 564.3 462 68.0
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 1.2e-158 563.9 451 69.6
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 9.9e-158 560.8 472 68.0
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 1.3e-157 560.5 470 66.6
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 2.2e-157 559.7 469 67.0
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 3.7e-157 558.9 480 65.0
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 3.2e-156 555.8 431 72.9
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 4.1e-156 555.4 642 54.5
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 7.1e-156 554.7 452 68.1
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 7.1e-156 554.7 445 68.3
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 2.1e-152 543.1 471 65.4
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 2.1e-152 543.1 447 69.1
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 1.8e-151 540.0 458 64.0
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 4.0e-151 538.9 465 62.8
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 6.8e-151 538.1 469 64.6
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 5.8e-150 535.0 472 63.1
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 1.7e-149 533.5 452 65.9
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 4.9e-149 531.9 486 64.0
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 1.4e-148 530.4 451 64.1
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 3.2e-148 529.3 446 65.0
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 1.0e-146 524.2 485 62.5
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 8.7e-146 521.2 447 65.3
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 1.1e-145 520.8 469 62.9
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 4.8e-144 515.4 455 64.8
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 8.1e-144 514.6 470 62.6
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 1.4e-143 513.8 517 57.6
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 2.6e-142 509.6 348 79.3
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 8.4e-141 504.6 439 63.1
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 1.9e-140 503.4 451 60.3
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 3.2e-140 502.7 460 64.8
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 4.2e-140 502.3 454 61.2
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 5.4e-140 501.9 463 62.0
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 7.1e-140 501.5 453 61.6
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 1.6e-139 500.4 424 67.0
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 4.6e-139 498.8 451 64.3
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 1.1e-137 494.2 470 60.0
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 4.3e-137 492.3 484 56.8
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 4.3e-137 492.3 468 58.8
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 4.3e-137 492.3 480 56.7
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 1.3e-136 490.7 445 61.3
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 3.6e-136 489.2 482 56.0
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 8.1e-136 488.0 442 64.0
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 2.4e-135 486.5 423 67.4
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 4.0e-135 485.7 456 57.7
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 1.5e-134 483.8 453 58.7
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 2.0e-134 483.4 482 55.4
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 1.1e-132 477.6 386 71.0
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 1.6e-131 473.8 452 61.1
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 4.3e-129 465.7 490 53.7
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 3.7e-128 462.6 457 55.6
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 9.0e-127 458.0 453 56.3
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 1.3e-125 454.1 500 52.6
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 1.4e-119 434.1 383 66.3
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 5.3e-119 432.2 356 66.3
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 4.2e-116 422.5 326 72.4
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 4.6e-115 419.1 331 68.3
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 2.8e-112 409.8 409 56.5
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 2.8e-112 409.8 464 52.4
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 6.5e-109 398.7 353 64.9
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 1.4e-106 391.0 403 60.0
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 4.3e-105 386.0 332 66.9
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 7.4e-97 358.6 264 75.8
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 4.7e-91 339.3 403 49.1
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 2.0e-86 323.9 289 65.1
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 1.0e-85 321.6 402 51.0
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.2e-78 298.1 338 50.6
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 5.5e-76 289.3 282 57.1
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 9.2e-71 271.9 431 42.7
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 9.2e-71 271.9 348 52.9
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 2.3e-61 240.7 381 45.9
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 3.3e-60 236.9 292 49.3
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 1.7e-53 214.5 182 59.9
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 5.6e-52 209.5 602 30.7
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 7.1e-47 192.6 171 62.0
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 5.1e-45 186.4 256 48.0
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 1.5e-44 184.9 163 69.9
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 1.3e-40 171.8 94 86.2
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 2.9e-40 170.6 102 81.4
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 6.0e-38 162.9 179 56.4
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 1.0e-37 162.2 92 80.4
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 7.3e-36 156.0 186 60.2
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 1.6e-30 138.3 144 61.1
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 4.0e-26 123.6 362 32.3
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 5.3e-26 123.2 112 60.7
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 2.4e-23 114.4 100 58.0
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 6.2e-19 99.8 122 50.8
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 9.0e-18 95.9 165 38.2
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 2.0e-17 94.7 57 75.4
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 8.4e-16 89.4 49 81.6
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 2.4e-15 87.8 150 38.7
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 1.3e-13 82.0 50 78.0
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 1.3e-13 82.0 50 78.0
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 9.6e-12 75.9 52 69.2
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 9.6e-12 75.9 83 45.8
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 1.4e-10 72.0 50 64.0
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 9.0e-10 69.3 56 58.9
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 2.0e-09 68.2 41 80.5
Ah.14g086750 Amaranthus hybridus HOM05D005431 ORTHO05D006762 5.8e-09 66.6 51 58.8
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 7.6e-09 66.2 59 61.0
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 3.8e-08 63.9 83 45.8
RcHm_v2.0_Chr5g0076741 Rosa chinensis HOM05D005431 ORTHO05D006762 6.5e-08 63.2 64 59.4
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 1.9e-07 61.6 33 84.8
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 2.5e-07 61.2 40 75.0


User provided reference genes

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