Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 9.9e-152 540.4 346 100.0
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 8.5e-119 431.0 324 84.0
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 1.1e-113 414.1 323 80.2
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 1.6e-112 410.2 324 81.2
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 8.8e-108 394.4 324 82.7
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 8.2e-106 387.9 325 81.2
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 1.4e-105 387.1 323 81.1
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 2.2e-103 379.8 324 82.4
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 5.0e-103 378.6 322 72.0
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 1.5e-102 377.1 326 80.4
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 2.1e-101 373.2 323 71.5
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 8.8e-100 367.9 324 79.0
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 9.8e-99 364.4 327 77.7
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 8.3e-98 361.3 324 71.9
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 3.1e-97 359.4 325 68.6
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 7.0e-97 358.2 324 74.7
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 9.1e-97 357.8 324 68.8
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 2.9e-95 352.8 325 72.9
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 5.0e-95 352.1 322 68.6
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 1.1e-94 350.9 321 78.5
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 1.9e-94 350.1 324 79.0
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 3.6e-93 345.9 321 72.9
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 6.1e-93 345.1 325 78.5
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 4.0e-92 342.4 324 76.9
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 1.2e-91 340.9 321 75.1
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 1.2e-91 340.9 289 79.2
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 4.4e-91 339.0 362 72.7
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 4.4e-91 339.0 362 72.7
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 6.3e-90 335.1 326 75.5
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 1.8e-89 333.6 323 67.2
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 4.1e-89 332.4 321 70.4
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 1.7e-87 327.0 326 76.7
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 3.8e-87 325.9 318 78.6
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 8.6e-87 324.7 322 67.1
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 8.6e-87 324.7 326 75.5
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 3.3e-86 322.8 319 67.1
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 4.3e-86 322.4 324 68.5
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 9.5e-86 321.2 362 69.1
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 1.2e-85 320.9 319 67.1
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 8.0e-85 318.2 326 64.4
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 2.3e-84 316.6 319 66.1
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 3.0e-84 316.2 326 73.9
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.3e-82 310.8 324 73.8
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 2.2e-82 310.1 324 77.5
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 6.4e-82 308.5 325 64.6
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 1.4e-81 307.4 323 74.0
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 1.4e-81 307.4 321 66.4
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 9.2e-81 304.7 289 65.4
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 9.2e-81 304.7 327 70.6
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 9.2e-81 304.7 323 71.8
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 2.0e-80 303.5 307 72.3
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 2.0e-80 303.5 324 65.4
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 2.0e-80 303.5 308 74.4
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 2.0e-80 303.5 293 75.8
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 4.6e-80 302.4 320 75.3
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 7.8e-80 301.6 324 73.5
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 1.7e-79 300.4 310 68.7
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 3.9e-79 299.3 351 63.2
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 8.6e-79 298.1 322 73.9
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 1.5e-78 297.4 323 69.3
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 1.9e-78 297.0 325 63.1
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 3.3e-78 296.2 325 67.7
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 5.6e-78 295.4 223 82.1
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 5.6e-78 295.4 314 72.9
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 9.5e-78 294.7 313 70.6
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 1.2e-77 294.3 319 65.5
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 3.1e-76 289.7 319 64.9
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 3.1e-76 289.7 322 73.9
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 4.0e-76 289.3 329 66.6
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 4.0e-76 289.3 268 79.1
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 2.6e-75 286.6 320 65.3
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 4.4e-75 285.8 326 72.1
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 3.7e-74 282.7 322 57.8
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 4.9e-74 282.3 259 68.3
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 8.3e-74 281.6 321 65.1
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 8.3e-74 281.6 324 68.2
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 1.4e-73 280.8 324 69.8
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 1.4e-73 280.8 324 70.4
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 3.2e-73 279.6 257 75.5
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 4.1e-73 279.3 331 64.7
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 4.6e-72 275.8 324 69.4
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 1.7e-71 273.9 339 56.0
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 1.5e-70 270.8 333 69.4
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 1.9e-70 270.4 326 70.9
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 3.3e-70 269.6 324 67.9
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 5.6e-70 268.9 332 69.6
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 7.3e-70 268.5 331 61.3
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.1e-69 266.9 350 54.9
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 1.4e-68 264.2 358 64.0
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 2.3e-68 263.5 313 70.0
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 9.9e-67 258.1 320 57.8
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 5.4e-65 252.3 314 70.4
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 5.4e-65 252.3 314 70.4
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 5.4e-65 252.3 314 70.4
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 1.6e-64 250.8 308 56.2
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 3.5e-64 249.6 271 73.1
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 7.8e-64 248.4 325 55.1
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 1.3e-63 247.7 314 69.7
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 1.7e-63 247.3 314 69.7
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 2.5e-62 243.4 321 57.3
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 2.5e-62 243.4 325 64.3
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 5.6e-62 242.3 325 58.5
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 3.1e-60 236.5 312 51.6
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 1.5e-59 234.2 293 67.6
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 2.0e-59 233.8 308 64.6
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.0e-59 233.8 340 54.1
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.0e-59 233.8 340 54.1
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 4.4e-59 232.6 285 68.8
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 9.9e-59 231.5 325 64.0
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 4.9e-58 229.2 327 66.4
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 4.9e-58 229.2 314 50.3
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.1e-57 228.0 244 60.7
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 4.2e-57 226.1 303 67.0
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 4.2e-57 226.1 185 77.3
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.1e-56 223.8 343 51.0
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 4.6e-56 222.6 325 55.4
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 1.5e-54 217.6 321 47.4
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 2.5e-54 216.9 323 53.6
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 3.3e-54 216.5 223 71.7
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 1.2e-53 214.5 223 70.9
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 2.8e-53 213.4 334 60.5
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 3.6e-53 213.0 330 45.2
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 6.9e-52 208.8 290 67.6
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 1.7e-50 204.1 301 57.8
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 6.4e-50 202.2 223 75.3
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 6.4e-50 202.2 223 75.3
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 1.4e-49 201.1 208 62.0
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 9.3e-49 198.4 332 52.7
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 3.0e-47 193.4 242 58.3
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 3.1e-44 183.3 349 48.4
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 4.5e-43 179.5 330 45.8
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 4.5e-43 179.5 330 45.8
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 4.9e-42 176.0 184 77.2
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 6.4e-42 175.6 332 45.2
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.4e-41 174.5 335 44.2
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.4e-41 174.5 327 45.0
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 9.3e-41 171.8 175 59.4
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 2.3e-39 167.2 171 74.9
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 6.7e-39 165.6 190 56.8
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 2.5e-38 163.7 327 49.2
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 4.3e-38 162.9 309 43.4
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 4.8e-37 159.5 325 55.1
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 2.9e-34 150.2 213 51.2
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 3.8e-34 149.8 309 42.4
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 3.5e-32 143.3 333 52.0
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 1.9e-30 137.5 285 56.5
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 6.5e-26 122.5 105 74.3
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.3e-23 114.8 194 51.5
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 1.6e-21 107.8 232 38.4
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 3.4e-19 100.1 51 90.2
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 4.5e-19 99.8 65 80.0
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 2.2e-18 97.4 56 83.9
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 3.8e-18 96.7 137 50.4
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 2.7e-16 90.5 169 40.8
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis HOM05D003850 ORTHO05D004515 3.9e-15 86.7 126 49.2
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-10 70.5 157 36.9
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 1.0e-07 62.0 91 48.4
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 8.8e-07 58.9 145 36.6
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 2.6e-06 57.4 78 55.1


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