Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 1.4e-119 433.0 214 100.0
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 8.8e-58 227.6 202 62.9
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 8.0e-51 204.5 214 54.2
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 2.3e-50 203.0 200 59.0
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 5.2e-50 201.8 199 58.3
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 3.7e-48 195.7 214 52.8
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 4.9e-48 195.3 208 56.7
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 1.1e-47 194.1 210 54.3
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.8e-47 193.4 209 56.5
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 5.4e-47 191.8 208 56.2
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 2.7e-46 189.5 209 54.1
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 4.5e-46 188.7 214 51.9
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 4.5e-46 188.7 223 53.8
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 3.8e-45 185.7 217 54.4
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 6.6e-45 184.9 199 55.3
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 1.5e-44 183.7 213 53.5
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 3.3e-44 182.6 208 54.8
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 3.3e-44 182.6 208 53.8
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 3.3e-44 182.6 200 55.0
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 7.3e-44 181.4 193 55.4
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 1.2e-43 180.6 204 53.9
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 1.6e-43 180.3 210 53.3
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 1.6e-43 180.3 204 53.9
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 1.6e-43 180.3 213 51.6
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 2.1e-43 179.9 199 52.8
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 4.7e-43 178.7 224 48.7
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 1.8e-42 176.8 206 53.9
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 3.0e-42 176.0 211 53.6
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 5.2e-42 175.3 210 52.9
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 6.8e-42 174.9 189 55.0
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 1.2e-41 174.1 219 50.7
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 1.2e-41 174.1 202 53.0
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.2e-41 174.1 194 55.2
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 1.2e-41 174.1 209 54.5
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 2.0e-41 173.3 180 55.6
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 2.6e-41 172.9 218 50.9
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 2.6e-41 172.9 210 52.9
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 7.5e-41 171.4 209 50.7
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 8.3e-40 167.9 199 51.8
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 1.4e-39 167.2 142 61.3
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 2.4e-39 166.4 130 68.5
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.2e-39 166.0 207 52.2
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.2e-39 166.0 207 52.2
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 5.4e-39 165.2 199 53.3
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 7.0e-39 164.9 194 53.6
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 7.0e-39 164.9 195 53.8
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 9.2e-39 164.5 192 52.6
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 1.2e-38 164.1 206 51.0
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 1.6e-38 163.7 223 48.4
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 1.6e-38 163.7 212 50.0
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 1.6e-38 163.7 213 49.8
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 2.0e-38 163.3 193 51.3
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 2.0e-38 163.3 206 49.0
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 7.8e-38 161.4 195 50.8
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.3e-37 160.6 210 51.4
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.3e-37 160.6 199 51.3
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.7e-37 160.2 131 67.2
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 2.3e-37 159.8 125 65.6
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 2.3e-37 159.8 207 50.7
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.3e-37 159.8 199 50.8
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 3.0e-37 159.5 199 50.8
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 3.0e-37 159.5 199 50.8
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 3.9e-37 159.1 202 49.0
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 3.9e-37 159.1 193 50.8
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 5.0e-37 158.7 190 53.7
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 6.6e-37 158.3 251 41.4
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 8.6e-37 157.9 193 50.3
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 1.1e-36 157.5 207 49.8
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 1.9e-36 156.8 199 51.3
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 1.9e-36 156.8 214 47.7
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.9e-36 156.8 202 48.0
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 2.5e-36 156.4 187 52.4
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 3.3e-36 156.0 109 70.6
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 4.3e-36 155.6 209 48.8
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 5.6e-36 155.2 197 50.3
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 9.5e-36 154.5 208 46.6
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 2.1e-35 153.3 119 68.9
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 8.0e-35 151.4 213 46.9
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 1.0e-34 151.0 197 49.2
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 3.1e-34 149.4 121 66.1
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 5.2e-34 148.7 121 63.6
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 8.9e-34 147.9 237 44.7
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 2.0e-33 146.7 190 47.4
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 2.6e-33 146.4 190 47.9
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 2.6e-33 146.4 203 47.8
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 4.4e-33 145.6 191 47.6
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 5.8e-33 145.2 161 54.7
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 5.8e-33 145.2 161 54.7
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 5.8e-33 145.2 197 51.3
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 7.5e-33 144.8 111 70.3
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 7.5e-33 144.8 111 70.3
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 7.5e-33 144.8 168 50.6
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 9.8e-33 144.4 212 46.7
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 1.3e-32 144.1 129 58.9
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.3e-32 144.1 97 71.1
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.3e-32 144.1 97 71.1
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 1.3e-32 144.1 136 60.3
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 1.7e-32 143.7 175 52.0
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 1.7e-32 143.7 198 49.0
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 2.9e-32 142.9 139 56.8
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 3.7e-32 142.5 190 47.4
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 6.4e-32 141.7 159 54.7
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 6.4e-32 141.7 223 45.3
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.4e-31 140.6 126 61.1
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.4e-31 140.6 126 61.1
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 1.9e-31 140.2 113 61.9
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 1.9e-31 140.2 114 62.3
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 1.9e-31 140.2 113 61.9
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 2.4e-31 139.8 181 50.3
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 3.2e-31 139.4 113 62.8
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 3.2e-31 139.4 141 58.2
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 4.1e-31 139.0 126 64.3
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 4.1e-31 139.0 192 48.4
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 5.4e-31 138.7 194 45.9
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 5.4e-31 138.7 194 45.9
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 7.0e-31 138.3 113 61.9
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 7.0e-31 138.3 113 61.9
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 1.6e-30 137.1 130 58.5
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 2.0e-30 136.7 164 49.4
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 2.0e-30 136.7 164 49.4
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 2.0e-30 136.7 211 46.0
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 2.7e-30 136.3 215 44.2
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 2.7e-30 136.3 190 46.3
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 3.5e-30 136.0 125 60.0
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 6.0e-30 135.2 237 42.6
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 1.0e-29 134.4 193 44.6
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 1.0e-29 134.4 107 64.5
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 2.3e-29 133.3 196 43.9
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 5.0e-29 132.1 175 49.1
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 6.6e-29 131.7 211 45.5
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.5e-28 130.6 192 48.4
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 3.3e-28 129.4 95 67.4
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 3.3e-28 129.4 95 67.4
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 5.6e-28 128.6 193 48.2
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 7.3e-28 128.3 140 55.0
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 9.5e-28 127.9 117 53.8
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 1.6e-27 127.1 169 47.9
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 1.6e-27 127.1 119 59.7
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.6e-27 127.1 89 70.8
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 2.8e-27 126.3 189 43.9
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 2.8e-27 126.3 189 43.9
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 3.6e-27 125.9 122 55.7
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 6.2e-27 125.2 191 42.4
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 8.1e-27 124.8 193 45.1
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 8.1e-27 124.8 166 48.2
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 2.3e-26 123.2 188 45.7
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 2.3e-26 123.2 166 48.8
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 5.2e-26 122.1 118 60.2
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 5.2e-26 122.1 118 60.2
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 6.8e-26 121.7 140 53.6
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 1.5e-25 120.6 187 46.0
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 5.8e-25 118.6 193 45.6
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 7.5e-25 118.2 170 48.2
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 9.8e-25 117.9 202 41.1
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 4.9e-24 115.5 192 43.8
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 6.4e-24 115.2 211 39.8
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 1.1e-23 114.4 65 81.5
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 5.4e-23 112.1 194 42.8
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 5.4e-23 112.1 201 41.3
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 5.4e-23 112.1 126 54.8
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 2.1e-22 110.2 122 54.9
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 2.7e-22 109.8 201 45.3
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 1.3e-21 107.5 173 42.2
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 5.1e-21 105.5 59 76.3
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 3.3e-20 102.8 59 78.0
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 3.3e-20 102.8 74 68.9
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 4.3e-20 102.4 98 56.1
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 1.2e-19 100.9 182 38.5
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 3.6e-19 99.4 115 53.9
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 5.2e-18 95.5 184 39.7
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 1.5e-17 94.0 143 43.4
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 1.6e-14 84.0 82 57.3
QL07p015856 Quercus lobata HOM05D003686 ORTHO05D004322 1.0e-13 81.3 205 34.6
QL93p0358_0018 Quercus lobata HOM05D003686 ORTHO05D004322 5.1e-13 79.0 205 34.1
Cre09.g401300 Chlamydomonas reinhardtii HOM05D003686 ORTHO05D004322 1.1e-12 77.8 39 82.1
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 2.5e-12 76.6 117 42.7
Lj5g0025755 Lotus japonicus HOM05D003686 ORTHO05D009933 1.1e-07 61.2 63 54.0
PRCOL_00005459 Prasinoderma coloniale HOM05D003686 ORTHO05D004322 1.6e-06 57.4 39 64.1


User provided reference genes

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