Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 1.5e-196 689.5 379 100.0
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 1.7e-128 463.4 385 71.4
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 1.9e-124 449.9 383 69.7
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 3.1e-122 442.6 385 67.8
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.5e-121 440.3 385 68.8
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 2.0e-121 439.9 391 66.8
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 2.9e-120 436.0 383 66.3
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 1.4e-119 433.7 384 64.3
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 2.4e-119 433.0 371 69.0
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 2.4e-119 433.0 379 65.2
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 7.9e-118 427.9 387 67.4
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 3.0e-117 426.0 381 67.5
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.6e-115 420.2 356 69.7
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 2.4e-114 416.4 383 65.8
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 1.7e-112 410.2 383 63.7
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 1.1e-111 407.5 382 65.7
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 7.1e-111 404.8 373 65.1
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 1.2e-110 404.1 346 69.7
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 3.5e-110 402.5 371 65.0
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 1.0e-109 401.0 370 66.8
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 3.0e-109 399.4 378 64.6
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 5.1e-109 398.7 352 69.3
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 1.5e-108 397.1 371 65.2
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 2.2e-107 393.3 351 67.8
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 2.8e-107 392.9 365 63.3
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 3.7e-107 392.5 363 66.4
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 1.8e-106 390.2 365 61.1
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 3.1e-106 389.4 382 62.0
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 6.9e-106 388.3 370 64.6
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 1.2e-105 387.5 366 64.2
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 2.6e-105 386.3 359 63.5
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 3.4e-105 386.0 371 64.2
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 3.4e-105 386.0 392 61.5
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 5.9e-105 385.2 383 62.1
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 2.9e-104 382.9 368 63.0
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 3.8e-104 382.5 350 64.9
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 5.0e-104 382.1 374 62.6
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 5.0e-104 382.1 375 62.1
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 6.5e-104 381.7 353 64.3
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 1.9e-103 380.2 361 64.8
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 2.5e-103 379.8 363 62.3
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 4.2e-103 379.0 357 61.6
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 5.5e-103 378.6 368 62.5
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 9.3e-103 377.9 364 64.6
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 9.3e-103 377.9 348 65.5
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.2e-102 377.5 355 61.4
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 1.6e-102 377.1 415 57.6
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 2.7e-102 376.3 357 65.8
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 6.1e-102 375.2 356 61.5
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 1.4e-101 374.0 366 63.4
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 1.4e-101 374.0 365 62.5
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 8.8e-101 371.3 355 62.3
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 3.3e-100 369.4 366 62.0
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 8.2e-99 364.8 346 64.5
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 8.2e-99 364.8 347 64.0
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 5.3e-98 362.1 350 60.6
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 9.1e-98 361.3 357 61.1
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 1.2e-97 360.9 367 61.0
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 3.4e-97 359.4 346 63.6
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 3.8e-96 355.9 350 61.7
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 5.0e-96 355.5 344 61.6
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 5.0e-96 355.5 348 62.4
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 8.5e-96 354.8 351 61.8
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 2.5e-95 353.2 366 57.7
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 2.1e-94 350.1 348 56.6
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 3.6e-94 349.4 333 64.0
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 1.8e-93 347.1 374 54.0
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 6.7e-93 345.1 368 59.8
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 1.5e-92 344.0 367 59.1
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 4.4e-92 342.4 343 58.9
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 7.4e-92 341.7 349 59.0
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 2.8e-91 339.7 345 59.7
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 1.4e-90 337.4 349 56.2
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 2.4e-90 336.7 342 57.3
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 1.3e-88 330.9 344 55.5
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 2.2e-88 330.1 348 56.6
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 6.5e-88 328.6 339 55.5
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 6.5e-88 328.6 339 55.5
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 1.1e-87 327.8 336 54.5
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 2.5e-87 326.6 339 54.9
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 5.5e-87 325.5 369 56.6
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 7.2e-87 325.1 336 54.2
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 2.3e-85 320.1 349 59.9
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 1.4e-82 310.8 384 55.2
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 1.2e-81 307.8 374 50.5
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 1.3e-80 304.3 355 53.5
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 2.2e-80 303.5 401 47.1
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 9.4e-79 298.1 544 43.9
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 7.0e-74 282.0 353 50.1
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 2.9e-72 276.6 249 67.9
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 3.1e-66 256.5 243 64.2
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 7.0e-66 255.4 232 65.9
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 5.9e-65 252.3 233 66.1
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 1.7e-64 250.8 295 58.0
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 1.4e-61 241.1 223 61.9
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 2.6e-60 236.9 231 65.4
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 4.9e-59 232.6 377 45.9
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 1.3e-56 224.6 177 63.8
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 1.7e-56 224.2 305 47.5
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 1.8e-53 214.2 302 45.4
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 3.7e-51 206.5 298 48.7
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 9.2e-50 201.8 172 63.4
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 8.0e-46 188.7 244 51.6
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 8.3e-43 178.7 152 63.8
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 5.6e-39 166.0 166 67.5
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 4.0e-37 159.8 302 42.4
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 9.9e-36 155.2 161 62.1
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 4.6e-33 146.4 181 53.0
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 1.6e-30 137.9 176 48.3
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.6e-30 137.9 177 58.2
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 9.9e-28 128.6 519 27.0
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 5.4e-26 122.9 116 60.3
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 2.5e-23 114.0 139 51.8
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 6.2e-22 109.4 184 42.9
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.8e-21 107.8 346 29.8
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 9.9e-20 102.1 192 46.9
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 6.4e-19 99.4 127 51.2
Ah.14g086750 Amaranthus hybridus HOM05D005431 ORTHO05D006762 3.5e-09 67.0 42 73.8
RcHm_v2.0_Chr5g0076741 Rosa chinensis HOM05D005431 ORTHO05D006762 6.0e-09 66.2 51 64.7
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 3.9e-08 63.5 33 87.9


User provided reference genes

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