Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc29.183 Carica papaya HOM05D005550 ORTHO05D006679 8.2e-73 276.9 139 100.0
Atru.chr9.1288 Acer truncatum HOM05D005550 ORTHO05D006679 2.2e-41 172.6 99 82.8
MD04G1062200 Malus domestica HOM05D005550 ORTHO05D006679 4.1e-40 168.3 130 63.8
Ciclev10018920m.g Citrus clementina HOM05D005550 ORTHO05D006679 5.4e-40 167.9 99 79.8
Prupe.5G066100 Prunus persica HOM05D005550 ORTHO05D006679 9.2e-40 167.2 98 78.6
QL12p011636 Quercus lobata HOM05D005550 ORTHO05D006679 9.2e-40 167.2 99 79.8
BcaB04g18410 Brassica carinata HOM05D005550 ORTHO05D006679 2.7e-39 165.6 98 80.6
CiPaw.11G081300 Carya illinoinensis HOM05D005550 ORTHO05D006679 2.7e-39 165.6 99 77.8
Lj2g0021636 Lotus japonicus HOM05D005550 ORTHO05D006679 2.7e-39 165.6 98 79.6
TAR375G0818 Trochodendron aralioides HOM05D005550 ORTHO05D006679 2.7e-39 165.6 95 81.1
CANSAT21G2208 Cannabis sativa HOM05D005550 ORTHO05D006679 4.6e-39 164.9 99 76.8
TWI15G1253 Tripterygium wilfordii HOM05D005550 ORTHO05D006679 6.0e-39 164.5 98 80.6
Actinidia02146 Actinidia chinensis HOM05D005550 ORTHO05D006679 7.8e-39 164.1 91 83.5
Lj2A221T32 Lonicera japonica HOM05D005550 ORTHO05D006679 1.0e-38 163.7 99 78.8
PSO063G2362 Papaver somniferum HOM05D005550 ORTHO05D006679 1.0e-38 163.7 101 75.2
ECA248G1640 Erigeron canadensis HOM05D005550 ORTHO05D006679 1.3e-38 163.3 98 78.6
Eucgr.E00409 Eucalyptus grandis HOM05D005550 ORTHO05D006679 1.3e-38 163.3 98 77.6
BcaC07g38064 Brassica carinata HOM05D005550 ORTHO05D006679 1.7e-38 162.9 99 77.8
BolC8t48465H Brassica oleracea HOM05D005550 ORTHO05D006679 1.7e-38 162.9 99 77.8
Lsat_1_v5_gn_3_1200 Lactuca sativa HOM05D005550 ORTHO05D006679 1.7e-38 162.9 99 77.8
Nn6g33903 Nelumbo nucifera HOM05D005550 ORTHO05D006679 2.3e-38 162.5 99 76.8
Thhalv10024454m.g Eutrema salsugineum HOM05D005550 ORTHO05D006679 3.0e-38 162.2 99 76.8
arahy.Tifrunner.gnm1.ann1.XE7N8H Arachis hypogaea HOM05D005550 ORTHO05D006679 3.9e-38 161.8 104 74.0
Ca_24591_v3 Cicer arietinum L. HOM05D005550 ORTHO05D006679 5.0e-38 161.4 98 76.5
MBI04_g09523_MAGBIO Magnolia biondii HOM05D005550 ORTHO05D006679 5.0e-38 161.4 98 75.5
Psat2g176640 Pisum sativum HOM05D005550 ORTHO05D006679 6.6e-38 161.0 98 76.5
Potri.001G156200 Populus trichocarpa HOM05D005550 ORTHO05D006679 6.6e-38 161.0 99 75.8
Gorai.008G234100 Gossypium raimondii HOM05D005550 ORTHO05D006679 8.6e-38 160.6 99 74.7
arahy.Tifrunner.gnm1.ann1.7NLF36 Arachis hypogaea HOM05D005550 ORTHO05D006679 1.1e-37 160.2 98 78.6
Medtr5g012900 Medicago truncatula HOM05D005550 ORTHO05D006679 1.1e-37 160.2 90 83.3
PGR042G2104 Punica granatum HOM05D005550 ORTHO05D006679 1.1e-37 160.2 99 77.8
TPR.G18117 Trifolium pratense HOM05D005550 ORTHO05D006679 1.1e-37 160.2 98 76.5
PSO782G0795 Papaver somniferum HOM05D005550 ORTHO05D006679 1.9e-37 159.5 99 77.8
THA.LOC104812808 Tarenaya hassleriana HOM05D005550 ORTHO05D006679 1.9e-37 159.5 99 75.8
Sc22g0000960 Simmondsia chinensis HOM05D005550 ORTHO05D006679 2.5e-37 159.1 98 79.6
AUR62019968 Chenopodium quinoa HOM05D005550 ORTHO05D006679 3.3e-37 158.7 132 62.9
Phvul.002G057100 Phaseolus vulgaris HOM05D005550 ORTHO05D006679 3.3e-37 158.7 98 77.6
VMungo1215G0570 Vigna mungo HOM05D005550 ORTHO05D006679 3.3e-37 158.7 98 77.6
Aa31LG6G120 Aethionema arabicum HOM05D005550 ORTHO05D006679 4.3e-37 158.3 99 74.7
Gohir.D12G218532 Gossypium hirsutum HOM05D005550 ORTHO05D006679 5.6e-37 157.9 99 73.7
CDE04G2441 Ceratophyllum demersum HOM05D005550 ORTHO05D006679 7.3e-37 157.5 91 78.0
AUR62007105 Chenopodium quinoa HOM05D005550 ORTHO05D006679 7.3e-37 157.5 132 61.4
AT4G17380 Arabidopsis thaliana HOM05D005550 ORTHO05D006679 9.5e-37 157.1 99 73.7
CARHR223990 Cardamine hirsuta HOM05D005550 ORTHO05D006679 9.5e-37 157.1 99 73.7
MELO3C005519.2 Cucumis melo HOM05D005550 ORTHO05D006679 9.5e-37 157.1 98 75.5
CsaV3_5G004390 Cucumis sativus L. HOM05D005550 ORTHO05D006679 9.5e-37 157.1 98 75.5
RcHm_v2.0_Chr7g0203731 Rosa chinensis HOM05D005550 ORTHO05D006679 9.5e-37 157.1 98 72.4
EL10Ac5g12365 Beta vulgaris HOM05D005550 ORTHO05D006679 1.2e-36 156.8 99 75.8
A08p13130 Brassica napus HOM05D005550 ORTHO05D006679 1.2e-36 156.8 99 75.8
BraA08t33293Z Brassica rapa HOM05D005550 ORTHO05D006679 1.2e-36 156.8 99 75.8
Migut.A01122 Erythranthe guttata HOM05D005550 ORTHO05D006679 1.2e-36 156.8 98 74.5
Glyma.11G034600 Glycine max HOM05D005550 ORTHO05D006679 1.2e-36 156.8 98 76.5
Rhsim11G0009700 Rhododendron simsii HOM05D005550 ORTHO05D006679 1.2e-36 156.8 91 81.3
SHI20465 Sapria himalayana HOM05D005550 ORTHO05D006679 1.2e-36 156.8 99 74.7
AL7G37330 Arabidopsis lyrata HOM05D005550 ORTHO05D006679 1.6e-36 156.4 99 72.7
CSS0014382 Camellia sinensis var. sinensis HOM05D005550 ORTHO05D006679 1.6e-36 156.4 91 80.2
Carub.0007s2403 Capsella rubella HOM05D005550 ORTHO05D006679 1.6e-36 156.4 99 72.7
FvH4_5g19230 Fragaria vesca HOM05D005550 ORTHO05D006679 1.6e-36 156.4 98 71.4
SGA_v2.0_scaffold104G30171 Striga asiatica HOM05D005550 ORTHO05D006679 1.6e-36 156.4 129 61.2
Thecc.03G248800 Theobroma cacao HOM05D005550 ORTHO05D006679 1.6e-36 156.4 99 72.7
HanXRQChr06g0164431 Helianthus annuus HOM05D005550 ORTHO05D006679 2.1e-36 156.0 110 70.0
Hund11606 Selenicereus undatus HOM05D005550 ORTHO05D006679 2.1e-36 156.0 98 77.6
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 2.8e-36 155.6 99 75.8
vmacro00189 Vaccinium macrocarpon HOM05D005550 ORTHO05D006679 2.8e-36 155.6 100 77.0
Lalb_Chr16g0379501 Lupinus albus HOM05D005550 ORTHO05D006679 3.6e-36 155.2 101 72.3
Duzib068G0290 Durio zibethinus HOM05D005550 ORTHO05D006679 4.7e-36 154.8 99 71.7
Hma1.2p1_1136F.1_g260520 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 4.7e-36 154.8 99 75.8
DCAR_006840 Daucus carota HOM05D005550 ORTHO05D006679 6.2e-36 154.5 98 74.5
Manes.01G082400 Manihot esculenta HOM05D005550 ORTHO05D006679 6.2e-36 154.5 99 72.7
ATR0057G027 Amborella trichopoda HOM05D005550 ORTHO05D006679 1.1e-35 153.7 98 73.5
Aqoxy7G00819 Aquilegia oxysepala HOM05D005550 ORTHO05D006679 1.8e-35 152.9 99 72.7
Sed0012504 Sechium edule HOM05D005550 ORTHO05D006679 1.8e-35 152.9 98 72.4
Haze_16328 Corylus avellana HOM05D005550 ORTHO05D006679 2.3e-35 152.5 91 78.0
Cc08_g12230 Coffea canephora HOM05D005550 ORTHO05D006679 3.1e-35 152.1 98 73.5
Zm00001eb105070 Zea mays HOM05D005550 ORTHO05D006679 3.1e-35 152.1 98 71.4
PGSC0003DMG400012503 Solanum tuberosum HOM05D005550 ORTHO05D006679 4.0e-35 151.8 99 73.7
unitig_744.g24474 Utricularia gibba HOM05D005550 ORTHO05D006679 6.8e-35 151.0 98 71.4
Solyc08g007330.3 Solanum lycopersicum HOM05D005550 ORTHO05D006679 8.9e-35 150.6 99 72.7
Sopen08g003270 Solanum pennellii HOM05D005550 ORTHO05D006679 8.9e-35 150.6 99 72.7
ClCG01G004190 Citrullus lanatus HOM05D005550 ORTHO05D006679 2.0e-34 149.4 100 72.0
Hma1.2p1_1136F.1_g260510 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 3.4e-34 148.7 110 69.1
CAN.G1227.20 Capsicum annuum HOM05D005550 ORTHO05D006679 9.8e-34 147.1 91 75.8
Peaxi162Scf00102g01071 Petunia axillaris HOM05D005550 ORTHO05D006679 9.8e-34 147.1 99 71.7
Gohir.A12G215866 Gossypium hirsutum HOM05D005550 ORTHO05D006679 1.3e-33 146.7 86 79.1
Nitab4.5_0000712g0130 Nicotiana tabacum HOM05D005550 ORTHO05D006679 1.7e-33 146.4 99 70.7
HPP92_025386 Vanilla planifolia HOM05D005550 ORTHO05D006679 3.7e-33 145.2 90 73.3
SEGI_35945 Sequoiadendron giganteum HOM05D005550 ORTHO05D006679 4.6e-31 138.3 127 55.9
FAN08G0299 Fragaria x ananassa HOM05D005550 ORTHO05D006679 2.0e-26 122.9 158 44.3
Sabra01G0134700 Salix brachista HOM05D005550 ORTHO05D006679 2.0e-26 122.9 71 78.9
FAN04G3230 Fragaria x ananassa HOM05D005550 ORTHO05D006679 2.6e-26 122.5 161 42.9
AagrBONN_evm.TU.Sc2ySwM_344.184 Anthoceros agrestis HOM05D005550 ORTHO05D006679 1.4e-24 116.7 99 56.6
Mapoly0001s0167 Marchantia polymorpha HOM05D005550 ORTHO05D006679 5.4e-24 114.8 99 57.6
Pp3c2_940 Physcomitrium patens HOM05D005550 ORTHO05D006679 1.6e-23 113.2 138 49.3
SMO340G0170 Selaginella moellendorffii HOM05D005550 ORTHO05D006679 7.3e-21 104.4 99 54.5
MSTRG.12114 Avicennia marina HOM05D005550 ORTHO05D006679 6.6e-14 81.3 48 79.2
CBR_g547 Chara braunii HOM05D005550 ORTHO05D006679 7.3e-13 77.8 101 38.6
SalBow6G3355 Salvia bowleyana HOM05D005550 ORTHO05D006679 1.6e-12 76.6 51 62.7
FAN18G0162 Fragaria x ananassa HOM05D005550 ORTHO05D006679 4.8e-12 75.1 98 44.9
Nitab4.5_0002225g0010 Nicotiana tabacum HOM05D005550 ORTHO05D006679 3.1e-11 72.4 50 64.0
MCO13G611 Micromonas commoda HOM05D005550 ORTHO05D006679 2.9e-09 65.9 108 38.9
Pp3c2_9530 Physcomitrium patens HOM05D004988 ORTHO05D005845 3.2e-08 62.4 81 40.7
PRCOL_00003604 Prasinoderma coloniale HOM05D005550 ORTHO05D006679 1.0e-06 57.4 94 36.2


User provided reference genes

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