Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 2.8e-200 701.8 380 100.0
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 5.7e-185 651.0 379 93.9
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 8.3e-184 647.1 379 92.9
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 5.6e-180 634.4 380 85.8
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 4.9e-144 515.0 378 76.5
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 1.2e-142 510.4 378 70.1
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 3.3e-140 502.3 384 69.0
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 1.4e-138 496.9 384 70.3
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 9.9e-137 490.7 386 67.4
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 1.3e-136 490.3 313 78.3
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 1.7e-136 490.0 384 68.5
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 2.2e-136 489.6 388 69.3
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 1.9e-135 486.5 313 77.3
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.4e-135 486.1 384 68.2
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 3.2e-135 485.7 304 79.6
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 4.2e-135 485.3 309 78.0
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 4.2e-135 485.3 310 78.7
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 7.1e-135 484.6 386 67.1
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 7.1e-135 484.6 388 68.8
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 1.2e-134 483.8 315 76.5
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 1.6e-134 483.4 385 67.3
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 2.1e-134 483.0 309 77.7
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 2.7e-134 482.6 391 67.5
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 3.5e-134 482.3 310 77.4
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 1.1e-132 477.2 384 72.1
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 1.1e-132 477.2 312 76.3
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.9e-132 476.5 322 74.5
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 2.5e-132 476.1 362 68.8
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 3.3e-132 475.7 322 74.2
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 3.3e-132 475.7 322 74.2
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 1.6e-131 473.4 381 70.1
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 2.8e-131 472.6 385 71.7
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 2.8e-131 472.6 378 67.5
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 1.1e-130 470.7 380 65.5
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 1.4e-130 470.3 388 64.7
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 2.4e-130 469.5 311 75.9
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 5.3e-130 468.4 390 68.2
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 9.0e-130 467.6 381 65.4
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 9.0e-130 467.6 372 69.4
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 1.5e-129 466.8 386 64.8
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 2.0e-129 466.5 321 72.0
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 4.9e-128 461.8 398 67.8
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 4.9e-128 461.8 389 65.6
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 8.4e-128 461.1 306 75.8
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 1.4e-127 460.3 392 64.8
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 1.9e-127 459.9 370 65.9
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 1.9e-127 459.9 390 65.6
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 4.2e-127 458.8 314 72.6
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 4.2e-127 458.8 309 74.4
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 4.2e-127 458.8 286 79.7
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 2.7e-126 456.1 315 73.0
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 4.6e-126 455.3 389 65.8
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 6.7e-125 451.4 326 70.2
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 1.1e-124 450.7 392 67.1
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 1.5e-124 450.3 376 63.6
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 3.3e-124 449.1 380 63.9
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 3.3e-124 449.1 387 62.5
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 4.3e-124 448.7 394 60.9
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 7.4e-124 448.0 323 70.0
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 7.4e-124 448.0 326 70.2
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 9.6e-124 447.6 325 69.2
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 9.6e-124 447.6 326 70.6
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 1.3e-123 447.2 323 70.3
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 1.6e-123 446.8 390 65.9
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 4.8e-123 445.3 391 59.8
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 3.1e-122 442.6 363 67.8
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 3.1e-122 442.6 278 80.2
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 4.0e-122 442.2 312 71.5
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 4.0e-122 442.2 251 85.3
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 1.2e-121 440.7 288 77.8
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 3.4e-121 439.1 250 84.8
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 5.8e-121 438.3 305 74.1
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 1.7e-120 436.8 389 60.7
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 8.4e-120 434.5 297 74.4
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 2.7e-118 429.5 304 72.4
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 3.5e-118 429.1 292 73.6
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 6.0e-118 428.3 313 68.7
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 6.0e-118 428.3 286 75.9
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 7.9e-118 427.9 313 68.4
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 7.9e-118 427.9 338 67.2
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 1.8e-117 426.8 312 68.3
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 2.3e-117 426.4 285 74.0
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 2.3e-117 426.4 313 68.1
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 2.3e-117 426.4 313 68.1
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 6.7e-117 424.9 307 70.7
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 1.4e-114 417.2 280 73.2
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 1.2e-110 404.1 341 63.6
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 3.0e-109 399.4 230 83.5
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 7.4e-108 394.8 328 63.4
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 2.2e-107 393.3 303 69.0
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 6.3e-107 391.7 307 67.8
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 4.1e-106 389.0 301 65.4
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 1.2e-105 387.5 385 56.1
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.5e-105 387.1 303 67.7
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 1.4e-103 380.6 314 65.6
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 2.5e-103 379.8 290 68.6
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 4.2e-103 379.0 288 69.8
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 6.1e-102 375.2 387 56.6
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 3.9e-101 372.5 247 76.1
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 5.9e-97 358.6 210 81.4
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 2.5e-95 353.2 304 61.2
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 2.2e-88 330.1 257 62.3
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 4.2e-87 325.9 375 52.8
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 4.7e-86 322.4 300 66.3
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 3.0e-85 319.7 280 59.3
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 3.7e-83 312.8 251 61.4
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 2.1e-78 297.0 232 65.1
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 6.6e-72 275.4 189 75.1
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.0e-61 241.5 262 54.6
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 8.0e-54 215.3 249 48.2
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 5.8e-52 209.1 162 62.3
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 4.3e-47 193.0 311 39.9
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 3.6e-46 189.9 151 66.9
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 4.9e-43 179.5 234 43.2
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 6.0e-33 146.0 83 80.7
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 2.7e-25 120.6 63 87.3
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 2.3e-24 117.5 75 74.7
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 6.2e-22 109.4 227 29.5
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 2.8e-14 84.0 235 28.9
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 3.7e-14 83.6 227 28.2
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 6.9e-13 79.3 51 76.5
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 3.4e-12 77.0 67 56.7
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 4.5e-12 76.6 88 47.7
MCO01G641 Micromonas commoda HOM05D006329 ORTHO05D008357 1.0e-11 75.5 237 27.8
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 2.2e-11 74.3 38 86.8
Lalb_Chr21g0313531 Lupinus albus HOM05D006329 ORTHO05D008357 4.2e-10 70.1 103 43.7


User provided reference genes

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