Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG04G001680 Citrullus lanatus HOM05D005147 ORTHO05D006132 3.0e-93 345.1 168 100.0
MELO3C008955.2 Cucumis melo HOM05D005147 ORTHO05D006132 3.8e-80 301.6 157 92.4
CsaV3_4G030880 Cucumis sativus L. HOM05D005147 ORTHO05D006132 4.3e-76 288.1 157 87.9
Sed0015307 Sechium edule HOM05D005147 ORTHO05D006132 1.0e-61 240.4 158 75.3
Haze_04614 Corylus avellana HOM05D005147 ORTHO05D006132 2.4e-50 202.6 157 66.2
Cfa006223 Carpinus fangiana HOM05D005147 ORTHO05D006132 3.4e-49 198.7 156 66.0
Rhsim05G0163700 Rhododendron simsii HOM05D005147 ORTHO05D006132 3.2e-47 192.2 155 63.2
QL10p016598 Quercus lobata HOM05D005147 ORTHO05D006132 1.2e-46 190.3 156 63.5
CiPaw.08G111700 Carya illinoinensis HOM05D005147 ORTHO05D006132 6.1e-46 188.0 150 63.3
TAR362G0740 Trochodendron aralioides HOM05D005147 ORTHO05D006132 1.8e-45 186.4 163 61.3
GSVIVG01007182001 Vitis vinifera HOM05D005147 ORTHO05D006132 3.9e-45 185.3 145 65.5
Sc16g0010670 Simmondsia chinensis HOM05D005147 ORTHO05D006132 5.1e-45 184.9 162 59.3
DCAR_023252 Daucus carota HOM05D005147 ORTHO05D006132 8.8e-45 184.1 156 60.3
Gohir.D03G072200 Gossypium hirsutum HOM05D005147 ORTHO05D006132 5.7e-44 181.4 166 59.0
Gorai.003G087900 Gossypium raimondii HOM05D005147 ORTHO05D006132 5.7e-44 181.4 166 59.0
Actinidia19646 Actinidia chinensis HOM05D005147 ORTHO05D006132 1.3e-43 180.3 150 62.0
CANSAT64G0126 Cannabis sativa HOM05D005147 ORTHO05D006132 1.3e-43 180.3 153 59.5
Gohir.A02G107106 Gossypium hirsutum HOM05D005147 ORTHO05D006132 1.3e-43 180.3 169 58.0
Hund07384 Selenicereus undatus HOM05D005147 ORTHO05D006132 1.7e-43 179.9 156 57.1
Glyma.10G171500 Glycine max HOM05D005147 ORTHO05D006132 4.8e-43 178.3 152 61.2
CSS0016526 Camellia sinensis var. sinensis HOM05D005147 ORTHO05D006132 8.2e-43 177.6 155 58.1
Ah.06g195220 Amaranthus hybridus HOM05D005147 ORTHO05D006132 1.1e-42 177.2 145 62.8
Prupe.6G365400 Prunus persica HOM05D005147 ORTHO05D006132 3.1e-42 175.6 153 58.2
vmacro07057 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 4.1e-42 175.3 169 56.2
VMungo0720G1244 Vigna mungo HOM05D005147 ORTHO05D006132 9.1e-42 174.1 151 59.6
Phvul.007G117900 Phaseolus vulgaris HOM05D005147 ORTHO05D006132 1.2e-41 173.7 151 60.3
ECA232G4784 Erigeron canadensis HOM05D005147 ORTHO05D006132 1.6e-41 173.3 147 57.1
Psat6g051880 Pisum sativum HOM05D005147 ORTHO05D006132 2.6e-41 172.6 151 58.9
Lj8A197T41 Lonicera japonica HOM05D005147 ORTHO05D006132 4.5e-41 171.8 164 53.7
Lalb_Chr06g0168531 Lupinus albus HOM05D005147 ORTHO05D006132 4.5e-41 171.8 166 54.8
MD00G1017100 Malus domestica HOM05D005147 ORTHO05D006132 4.5e-41 171.8 159 56.0
Duzib128G1295 Durio zibethinus HOM05D005147 ORTHO05D006132 5.9e-41 171.4 169 58.0
Lj5g0011670 Lotus japonicus HOM05D005147 ORTHO05D006132 1.3e-40 170.2 148 58.1
Sabra10G0137300 Salix brachista HOM05D005147 ORTHO05D006132 1.3e-40 170.2 201 49.3
MD12G1261400 Malus domestica HOM05D005147 ORTHO05D006132 1.7e-40 169.9 159 54.7
RcHm_v2.0_Chr3g0447391 Rosa chinensis HOM05D005147 ORTHO05D006132 1.7e-40 169.9 149 57.7
arahy.Tifrunner.gnm1.ann1.IZJM3F Arachis hypogaea HOM05D005147 ORTHO05D006132 2.2e-40 169.5 143 58.7
Os04g0496400 Oryza sativa ssp. japonica HOM05D005147 ORTHO05D006132 2.2e-40 169.5 153 56.9
THA.LOC104820936 Tarenaya hassleriana HOM05D005147 ORTHO05D006132 2.2e-40 169.5 167 54.5
Aa31LG11G13360 Aethionema arabicum HOM05D005147 ORTHO05D006132 2.9e-40 169.1 148 58.1
MBI07_g33483_MAGBIO Magnolia biondii HOM05D005147 ORTHO05D006132 2.9e-40 169.1 175 55.4
HanXRQChr16g0511771 Helianthus annuus HOM05D005147 ORTHO05D006132 3.8e-40 168.7 153 55.6
FvH4_6g00060 Fragaria vesca HOM05D005147 ORTHO05D006132 5.0e-40 168.3 143 58.7
FAN09G3357 Fragaria x ananassa HOM05D005147 ORTHO05D006132 5.0e-40 168.3 143 58.7
TWI36G1457 Tripterygium wilfordii HOM05D005147 ORTHO05D006132 6.5e-40 167.9 185 49.7
PSO017G2923 Papaver somniferum HOM05D005147 ORTHO05D006132 8.5e-40 167.5 170 53.5
arahy.Tifrunner.gnm1.ann1.9U7TDI Arachis hypogaea HOM05D005147 ORTHO05D006132 1.1e-39 167.2 143 58.0
FAN02G4331 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.1e-39 167.2 143 58.0
Potri.010G179000 Populus trichocarpa HOM05D005147 ORTHO05D006132 1.9e-39 166.4 199 48.7
MSTRG.27416 Avicennia marina HOM05D005147 ORTHO05D006132 2.5e-39 166.0 148 55.4
Ciclev10000750m.g Citrus clementina HOM05D005147 ORTHO05D006132 2.5e-39 166.0 186 51.1
Nitab4.5_0001003g0200 Nicotiana tabacum HOM05D005147 ORTHO05D006132 4.2e-39 165.2 150 54.7
EL10Ac4g10030 Beta vulgaris HOM05D005147 ORTHO05D006132 7.2e-39 164.5 166 54.2
Lalb_Chr02g0149501 Lupinus albus HOM05D005147 ORTHO05D006132 6.1e-38 161.4 151 55.6
Solyc11g008700.2 Solanum lycopersicum HOM05D005147 ORTHO05D006132 6.1e-38 161.4 150 56.0
Cc09_g04140 Coffea canephora HOM05D005147 ORTHO05D006132 8.0e-38 161.0 156 49.4
Atru.chr2.212 Acer truncatum HOM05D005147 ORTHO05D006132 1.4e-37 160.2 190 49.5
Nitab4.5_0003928g0030 Nicotiana tabacum HOM05D005147 ORTHO05D006132 1.4e-37 160.2 144 54.9
AT5G16260 Arabidopsis thaliana HOM05D005147 ORTHO05D006132 1.8e-37 159.8 173 47.4
AUR62000267 Chenopodium quinoa HOM05D005147 ORTHO05D006132 1.8e-37 159.8 170 51.8
PSO675G5070 Papaver somniferum HOM05D005147 ORTHO05D006132 3.0e-37 159.1 171 50.9
Peaxi162Scf00254g00618 Petunia axillaris HOM05D005147 ORTHO05D006132 3.0e-37 159.1 154 52.6
Ca_09963_v3 Cicer arietinum L. HOM05D005147 ORTHO05D006132 4.0e-37 158.7 160 55.0
FAN06G0198 Fragaria x ananassa HOM05D005147 ORTHO05D006132 4.0e-37 158.7 141 57.4
Sp6g27900 Schrenkiella parvula HOM05D005147 ORTHO05D006132 4.0e-37 158.7 179 49.7
CDE09G1177 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 5.2e-37 158.3 158 51.9
FAN06G0735 Fragaria x ananassa HOM05D005147 ORTHO05D006132 6.7e-37 157.9 141 57.4
FAN10G0474 Fragaria x ananassa HOM05D005147 ORTHO05D001533 1.1e-36 157.1 141 56.7
Eucgr.B01442 Eucalyptus grandis HOM05D005147 ORTHO05D006132 1.5e-36 156.8 147 55.1
ATR0743G159 Amborella trichopoda HOM05D005147 ORTHO05D006132 2.6e-36 156.0 169 50.3
BcaB08g36860 Brassica carinata HOM05D005147 ORTHO05D006132 2.6e-36 156.0 172 49.4
Carub.0006s1445 Capsella rubella HOM05D005147 ORTHO05D006132 2.6e-36 156.0 170 48.2
SGA_v2.0_scaffold62G21485 Striga asiatica HOM05D005147 ORTHO05D006132 2.6e-36 156.0 153 51.6
Aqoxy3G00601 Aquilegia oxysepala HOM05D005147 ORTHO05D006132 4.4e-36 155.2 166 53.0
AL6G27150 Arabidopsis lyrata HOM05D005147 ORTHO05D006132 4.4e-36 155.2 173 46.8
Sabra08G0058100 Salix brachista HOM05D005147 ORTHO05D006132 4.4e-36 155.2 234 42.3
unitig_747.g21462 Utricularia gibba HOM05D005147 ORTHO05D006132 1.7e-35 153.3 147 54.4
Zm00001eb196230 Zea mays HOM05D005147 ORTHO05D006132 2.8e-35 152.5 145 53.8
Zm00001eb093390 Zea mays HOM05D005147 ORTHO05D006132 8.2e-35 151.0 156 53.2
Actinidia40010 Actinidia chinensis HOM05D005147 ORTHO05D006132 1.8e-34 149.8 125 64.0
A10p22800 Brassica napus HOM05D001331 ORTHO05D006132 1.8e-34 149.8 167 47.3
BraA10t44347Z Brassica rapa HOM05D005147 ORTHO05D006132 1.8e-34 149.8 167 47.3
Migut.F02088 Erythranthe guttata HOM05D005147 ORTHO05D006132 2.4e-34 149.4 144 52.8
Sopen11g004480 Solanum pennellii HOM05D005147 ORTHO05D006132 2.4e-34 149.4 150 53.3
BolC9t58914H Brassica oleracea HOM05D005147 ORTHO05D006132 3.1e-34 149.1 162 48.8
BcaC04g18905 Brassica carinata HOM05D005147 ORTHO05D006132 7.0e-34 147.9 160 48.8
PGR119G0204 Punica granatum HOM05D005147 ORTHO05D006132 7.0e-34 147.9 155 47.1
Lsat_1_v5_gn_1_127920 Lactuca sativa HOM05D005147 ORTHO05D006132 9.1e-34 147.5 155 51.6
Manes.13G000300 Manihot esculenta HOM05D005147 ORTHO05D006132 1.2e-33 147.1 189 45.5
Medtr1g078210 Medicago truncatula HOM05D005147 ORTHO05D006132 7.2e-31 137.9 146 52.7
Dinv17137 Davidia involucrata HOM05D005147 ORTHO05D006132 4.7e-30 135.2 121 59.5
Nn3g19309 Nelumbo nucifera HOM05D005147 ORTHO05D006132 1.0e-29 134.0 164 48.2
Mapoly0021s0138 Marchantia polymorpha HOM05D005147 ORTHO05D006132 1.8e-29 133.3 185 40.0
AUR62006615 Chenopodium quinoa HOM05D005147 ORTHO05D006132 5.0e-24 115.2 143 44.1
Thecc.07G106800 Theobroma cacao HOM05D005147 ORTHO05D006132 2.2e-19 99.8 132 48.5
SMO364G0719 Selaginella moellendorffii HOM05D005147 ORTHO05D006132 2.8e-19 99.4 159 35.2
Thhalv10013396m.g Eutrema salsugineum HOM05D005147 ORTHO05D006132 1.6e-17 93.6 114 43.9
SHI13697 Sapria himalayana HOM05D005147 ORTHO05D000014 1.0e-16 90.9 67 56.7
HPP92_011450 Vanilla planifolia HOM05D005147 ORTHO05D006132 1.0e-16 90.9 98 45.9
AagrBONN_evm.TU.Sc2ySwM_368.1306 Anthoceros agrestis HOM05D005147 ORTHO05D006132 5.0e-16 88.6 157 35.0
Hma1.2p1_1029F.1_g249580 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 1.9e-15 86.7 97 47.4
Hma1.2p1_3112F.1_g332769 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 1.9e-15 86.7 97 47.4
Cpa.g.sc88.4 Carica papaya HOM05D005147 ORTHO05D006132 2.5e-15 86.3 158 38.0
FvH4_7g28070 Fragaria vesca HOM05D005147 ORTHO05D001533 2.2e-11 73.2 76 51.3
SHI13696 Sapria himalayana HOM05D005147 ORTHO05D006132 3.7e-11 72.4 73 47.9
CBR_g19604 Chara braunii HOM05D005147 ORTHO05D006132 7.0e-10 68.2 247 24.7
CBR_g50472 Chara braunii HOM05D005147 ORTHO05D006132 3.5e-09 65.9 68 44.1
Cre17.g707050 Chlamydomonas reinhardtii HOM05D005147 ORTHO05D006132 8.6e-08 61.2 147 31.3


User provided reference genes

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