Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 1.8e-182 642.5 342 100.0
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 6.2e-138 494.6 291 92.8
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 1.3e-116 423.7 295 77.3
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.8e-92 343.6 272 71.7
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 6.3e-90 335.1 291 66.7
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 1.1e-89 334.3 277 67.9
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 1.4e-89 334.0 273 68.9
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 4.5e-88 328.9 289 65.1
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 5.0e-87 325.5 296 61.5
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 1.1e-86 324.3 264 70.8
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 1.4e-86 323.9 261 70.1
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 2.5e-86 323.2 261 68.2
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 3.2e-86 322.8 280 64.6
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 4.2e-86 322.4 291 64.9
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 5.5e-86 322.0 292 64.4
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 4.7e-85 318.9 278 66.9
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 6.1e-85 318.5 274 67.5
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 7.9e-85 318.2 265 67.2
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 7.9e-85 318.2 265 67.5
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 7.9e-85 318.2 293 65.5
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 1.8e-84 317.0 298 65.1
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 1.8e-84 317.0 271 66.1
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 1.8e-84 317.0 293 63.8
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 3.9e-84 315.8 282 64.9
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 8.8e-84 314.7 275 66.5
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 8.8e-84 314.7 301 61.8
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 2.6e-83 313.2 300 61.3
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 4.4e-83 312.4 261 70.1
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.3e-82 310.8 275 66.9
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 1.7e-82 310.5 275 66.9
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 1.7e-82 310.5 277 65.7
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 2.2e-82 310.1 269 66.2
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 2.2e-82 310.1 280 66.1
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 3.7e-82 309.3 280 64.3
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 6.3e-82 308.5 285 62.1
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 6.3e-82 308.5 296 60.5
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 1.1e-81 307.8 299 59.5
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 4.1e-81 305.8 296 63.5
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 1.2e-80 304.3 298 59.7
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 4.5e-80 302.4 323 56.7
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 1.0e-79 301.2 281 63.0
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 1.0e-79 301.2 269 63.2
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 2.2e-79 300.1 292 59.6
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 2.2e-79 300.1 299 59.9
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 2.2e-79 300.1 301 60.1
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 5.0e-79 298.9 296 61.8
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 8.5e-79 298.1 265 66.8
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 3.2e-78 296.2 280 64.6
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 3.2e-78 296.2 265 65.7
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 4.2e-78 295.8 294 58.2
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 9.4e-78 294.7 290 60.3
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 2.1e-77 293.5 267 64.4
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 2.7e-77 293.1 268 61.9
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 2.7e-77 293.1 294 59.5
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 4.7e-77 292.4 261 64.4
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 6.1e-77 292.0 277 64.3
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 1.0e-76 291.2 261 68.2
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 3.0e-76 289.7 261 63.6
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 3.9e-76 289.3 280 58.6
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 6.7e-76 288.5 266 57.9
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 6.7e-76 288.5 307 54.1
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 8.8e-76 288.1 266 58.3
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 1.5e-75 287.3 295 58.0
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 2.6e-75 286.6 285 55.8
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 6.3e-74 282.0 264 60.2
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 8.2e-74 281.6 268 61.2
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 2.4e-73 280.0 311 54.0
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 3.1e-73 279.6 270 61.5
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 9.1e-73 278.1 268 64.9
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 1.6e-72 277.3 261 58.6
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 1.6e-72 277.3 263 57.8
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 3.5e-72 276.2 178 89.3
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 5.9e-72 275.4 261 57.9
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 1.0e-71 274.6 264 56.1
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 1.0e-71 274.6 264 56.1
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 1.0e-71 274.6 299 53.2
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 1.1e-70 271.2 263 55.9
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 1.1e-70 271.2 285 51.9
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 1.1e-70 271.2 275 58.2
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 3.2e-70 269.6 262 61.5
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 4.2e-70 269.2 273 59.3
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 8.0e-69 265.0 244 64.8
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 1.0e-68 264.6 297 52.9
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 1.8e-68 263.8 264 54.2
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 1.8e-68 263.8 351 48.4
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 3.0e-68 263.1 261 55.9
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 9.7e-67 258.1 313 53.7
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 6.3e-66 255.4 232 65.9
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 1.1e-65 254.6 286 57.7
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 1.1e-65 254.6 272 52.2
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 1.6e-64 250.8 277 51.3
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 2.7e-64 250.0 298 50.7
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 3.5e-64 249.6 306 52.6
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 2.7e-61 240.0 289 49.8
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 1.0e-60 238.0 243 62.1
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 6.3e-58 228.8 214 64.5
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 1.4e-57 227.6 214 63.6
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 3.1e-57 226.5 262 50.4
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 1.6e-56 224.2 272 51.1
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 1.1e-54 218.0 272 49.6
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.5e-54 217.6 201 65.7
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 3.3e-54 216.5 277 46.9
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 4.7e-53 212.6 292 43.8
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 7.3e-46 188.7 217 50.7
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 1.4e-44 184.5 282 46.8
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 1.2e-37 161.4 300 38.0
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 3.7e-34 149.8 144 62.5
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 1.4e-33 147.9 238 42.4
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 3.6e-29 133.3 220 44.5
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 8.1e-29 132.1 184 56.5
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 5.4e-25 119.4 112 58.9
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 2.5e-22 110.5 138 52.2
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 1.1e-20 105.1 60 75.0
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.6e-16 91.3 47 91.5
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.7e-15 87.8 95 55.8
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 1.5e-14 84.7 122 44.3
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 3.5e-08 63.5 33 87.9
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 3.0e-07 60.5 40 70.0


User provided reference genes

Program Settings