Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 1.9e-102 375.9 198 100.0
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 2.1e-82 309.3 203 78.8
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 1.1e-78 297.0 207 76.8
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 3.2e-78 295.4 207 76.3
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 5.3e-73 278.1 207 74.9
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 1.8e-68 263.1 209 70.3
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.8e-68 263.1 208 69.7
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.8e-68 263.1 207 68.1
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 2.3e-68 262.7 203 70.9
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 5.1e-68 261.5 203 70.9
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 6.7e-68 261.2 209 68.4
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 8.7e-68 260.8 207 71.0
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 1.9e-67 259.6 203 70.9
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 7.4e-67 257.7 201 75.1
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 7.4e-67 257.7 198 69.7
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 9.6e-67 257.3 210 70.5
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 1.6e-66 256.5 209 70.8
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 6.2e-66 254.6 210 69.5
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 1.5e-64 250.0 208 66.8
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 5.8e-64 248.1 207 66.7
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 5.8e-64 248.1 203 68.5
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 2.2e-63 246.1 209 64.6
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.2e-63 246.1 204 69.6
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 1.1e-62 243.8 210 67.6
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 4.2e-62 241.9 209 68.9
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 9.3e-62 240.7 206 65.5
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 2.1e-61 239.6 204 67.2
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 2.1e-61 239.6 204 67.2
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 2.1e-61 239.6 202 70.3
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 3.5e-61 238.8 214 64.0
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 4.6e-61 238.4 194 68.6
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 1.3e-60 236.9 201 70.6
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 5.1e-60 235.0 210 64.8
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 6.7e-60 234.6 207 66.7
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 2.5e-59 232.6 208 67.8
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 5.7e-59 231.5 208 66.3
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 7.4e-59 231.1 210 63.3
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 1.3e-58 230.3 209 65.6
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 3.7e-58 228.8 200 64.0
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 3.1e-57 225.7 186 68.8
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 9.0e-57 224.2 203 62.1
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 1.2e-56 223.8 206 66.0
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 1.2e-56 223.8 212 65.1
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 2.0e-56 223.0 202 67.8
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 3.4e-56 222.2 206 65.5
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 4.5e-56 221.9 206 61.7
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 7.6e-56 221.1 203 66.0
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 2.9e-55 219.2 203 64.0
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 3.8e-55 218.8 204 64.2
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.8e-55 218.8 206 62.1
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.8e-55 218.8 206 62.1
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 3.2e-54 215.7 209 64.1
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 4.2e-54 215.3 202 66.3
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 5.5e-54 214.9 225 58.2
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 9.3e-54 214.2 209 62.7
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.6e-53 213.4 209 61.2
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 4.6e-53 211.8 206 61.2
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 1.0e-52 210.7 179 65.9
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 1.0e-52 210.7 184 64.7
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 3.0e-52 209.1 119 84.9
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 8.7e-52 207.6 203 60.6
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 1.1e-51 207.2 231 58.4
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 1.5e-51 206.8 217 59.0
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 1.9e-51 206.5 210 62.9
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 4.3e-51 205.3 208 61.1
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 8.2e-50 201.1 208 59.1
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 1.1e-49 200.7 215 59.5
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 1.1e-49 200.7 202 65.3
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 1.4e-49 200.3 195 61.5
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 4.1e-49 198.7 224 55.4
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 5.3e-49 198.4 207 58.0
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 6.9e-49 198.0 159 71.1
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 2.0e-48 196.4 208 55.3
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 4.5e-48 195.3 226 53.1
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 4.5e-48 195.3 201 60.2
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 8.5e-47 191.0 190 63.2
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 1.1e-46 190.7 271 46.1
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 1.1e-46 190.7 186 59.7
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 4.2e-46 188.7 224 52.7
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 4.2e-46 188.7 208 56.2
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 7.2e-46 188.0 206 54.9
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 2.7e-45 186.0 183 64.5
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 3.6e-45 185.7 240 54.2
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.3e-44 183.0 188 59.0
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 3.9e-44 182.2 145 71.7
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 6.7e-44 181.4 209 54.5
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 1.1e-43 180.6 209 54.1
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 2.0e-43 179.9 207 54.1
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 2.5e-43 179.5 207 54.1
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 4.3e-43 178.7 188 56.9
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 5.7e-43 178.3 139 69.8
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 5.7e-43 178.3 189 58.7
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 1.7e-42 176.8 208 53.8
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 2.2e-42 176.4 200 55.0
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 4.8e-42 175.3 197 54.3
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 4.8e-42 175.3 117 75.2
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 4.8e-42 175.3 117 75.2
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 8.2e-42 174.5 149 65.8
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 8.2e-42 174.5 149 65.8
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 8.2e-42 174.5 183 59.6
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 1.4e-41 173.7 186 57.5
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 2.4e-41 172.9 133 77.4
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 4.1e-41 172.2 199 53.3
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.2e-40 170.6 140 70.0
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 2.6e-40 169.5 258 46.1
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 5.9e-40 168.3 118 73.7
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 5.9e-40 168.3 118 73.7
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 2.9e-39 166.0 205 56.1
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 1.4e-38 163.7 120 71.7
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 1.4e-38 163.7 120 71.7
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 1.9e-38 163.3 89 86.5
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 1.9e-38 163.3 89 86.5
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 1.9e-38 163.3 203 52.7
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 7.2e-38 161.4 210 50.0
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 1.6e-37 160.2 185 56.8
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 2.7e-37 159.5 186 54.3
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 2.7e-37 159.5 204 52.9
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 6.1e-37 158.3 201 52.2
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 6.1e-37 158.3 187 56.1
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 7.9e-37 157.9 117 70.9
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 1.0e-36 157.5 204 53.9
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.4e-36 157.1 186 54.8
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 1.4e-36 157.1 201 49.3
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 1.8e-36 156.8 136 63.2
QL07p015856 Quercus lobata HOM05D003686 ORTHO05D004322 1.8e-36 156.8 195 53.8
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 2.3e-36 156.4 120 69.2
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 3.0e-36 156.0 186 54.8
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 3.0e-36 156.0 186 54.8
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 3.9e-36 155.6 108 68.5
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 5.1e-36 155.2 171 59.1
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 5.1e-36 155.2 186 55.4
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 8.8e-36 154.5 202 52.5
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 8.8e-36 154.5 215 50.2
QL93p0358_0018 Quercus lobata HOM05D003686 ORTHO05D004322 8.8e-36 154.5 195 53.3
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 2.0e-35 153.3 165 56.4
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 3.3e-35 152.5 192 55.2
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 7.4e-35 151.4 202 52.5
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 7.4e-35 151.4 202 52.5
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 2.2e-34 149.8 205 51.2
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 2.2e-34 149.8 110 71.8
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 3.7e-34 149.1 209 49.8
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 4.8e-34 148.7 189 55.0
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 4.8e-34 148.7 200 53.0
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 6.3e-34 148.3 216 49.5
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 2.4e-33 146.4 169 58.0
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 7.0e-33 144.8 145 60.0
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 1.2e-32 144.1 166 57.2
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 1.6e-32 143.7 180 52.2
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 5.9e-32 141.7 182 51.6
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 2.9e-31 139.4 173 53.2
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.9e-31 139.4 212 45.8
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.5e-30 137.1 106 69.8
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.5e-30 137.1 106 69.8
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 1.5e-30 137.1 167 53.9
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 2.5e-30 136.3 122 66.4
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.2e-29 134.0 123 61.0
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 6.1e-29 131.7 95 71.6
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 6.1e-29 131.7 95 71.6
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 6.1e-29 131.7 124 61.3
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 8.0e-29 131.3 80 78.8
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 3.0e-28 129.4 117 64.1
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 3.0e-28 129.4 117 64.1
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 1.1e-27 127.5 193 47.7
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 3.3e-27 125.9 161 49.7
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 4.4e-27 125.6 186 48.9
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 5.7e-27 125.2 231 44.6
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 5.3e-25 118.6 187 48.7
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 1.2e-24 117.5 62 85.5
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 5.9e-24 115.2 80 75.0
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 7.7e-24 114.8 62 87.1
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 7.7e-24 114.8 140 53.6
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 1.3e-23 114.0 115 57.4
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 2.2e-23 113.2 56 94.6
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 3.8e-23 112.5 190 49.5
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 5.5e-22 108.6 170 45.9
Cre09.g401300 Chlamydomonas reinhardtii HOM05D003686 ORTHO05D004322 5.5e-14 82.0 41 82.9
Lj5g0006065 Lotus japonicus HOM05D003686 ORTHO05D004322 7.2e-14 81.6 74 63.5
Lj5g0025755 Lotus japonicus HOM05D003686 ORTHO05D009933 3.0e-12 76.3 66 63.6
PSO384G1591 Papaver somniferum HOM05D000185 ORTHO05D000105 2.4e-09 66.6 182 39.6
PSO384G1636 Papaver somniferum HOM05D000185 ORTHO05D000105 2.4e-09 66.6 182 39.6
PSO384G1681 Papaver somniferum HOM05D003686 ORTHO05D004322 1.6e-08 63.9 80 53.8
PRCOL_00005459 Prasinoderma coloniale HOM05D003686 ORTHO05D004322 5.9e-08 62.0 41 65.9
PSO384G1563 Papaver somniferum HOM05D003686 ORTHO05D004322 1.9e-06 57.0 153 40.5


User provided reference genes

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