Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.3e-105 386.3 188 100.0
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.3e-105 386.3 188 100.0
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 3.5e-42 175.6 102 83.3
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 9.5e-40 167.5 102 80.4
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 4.7e-39 165.2 106 76.4
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 1.2e-37 160.6 90 85.6
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 1.2e-37 160.6 123 69.1
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.2e-37 160.6 106 76.4
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 4.4e-37 158.7 106 74.5
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 9.9e-37 157.5 111 71.2
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 3.7e-36 155.6 101 77.2
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 3.7e-36 155.6 101 77.2
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.9e-35 153.3 111 72.1
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.4e-35 152.9 95 81.1
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 3.2e-35 152.5 106 69.8
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 4.1e-35 152.1 122 63.1
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 7.1e-35 151.4 104 74.0
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 7.1e-35 151.4 122 64.8
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 9.2e-35 151.0 106 69.8
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 1.6e-34 150.2 101 74.3
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.6e-34 150.2 122 63.1
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 2.1e-34 149.8 102 73.5
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 2.1e-34 149.8 101 73.3
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.7e-34 149.4 105 69.5
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 3.5e-34 149.1 106 70.8
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 7.8e-34 147.9 88 83.0
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 7.8e-34 147.9 106 70.8
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 1.0e-33 147.5 106 71.7
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 3.0e-33 146.0 106 71.7
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 3.0e-33 146.0 96 71.9
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 3.9e-33 145.6 106 71.7
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.5e-32 143.7 106 72.6
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 1.5e-32 143.7 113 67.3
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 3.3e-32 142.5 97 71.1
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 3.3e-32 142.5 94 74.5
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 4.3e-32 142.1 117 64.1
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 4.3e-32 142.1 104 68.3
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 5.6e-32 141.7 123 61.0
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 7.3e-32 141.4 103 70.9
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 7.3e-32 141.4 100 71.0
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 9.5e-32 141.0 106 70.8
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.2e-31 140.6 98 70.4
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 1.2e-31 140.6 106 69.8
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 1.6e-31 140.2 94 72.3
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 2.8e-31 139.4 106 69.8
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.8e-31 139.4 106 67.9
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 2.8e-31 139.4 106 67.9
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 4.7e-31 138.7 117 63.2
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 8.1e-31 137.9 100 70.0
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 1.1e-30 137.5 108 64.8
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 1.4e-30 137.1 117 62.4
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 1.8e-30 136.7 103 68.9
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 1.8e-30 136.7 110 64.5
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 3.1e-30 136.0 106 67.0
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 3.1e-30 136.0 106 70.8
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 5.2e-30 135.2 106 67.9
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 5.2e-30 135.2 106 67.9
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 5.2e-30 135.2 98 68.4
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 1.5e-29 133.7 108 69.4
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 1.5e-29 133.7 98 68.4
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 1.5e-29 133.7 98 68.4
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 2.0e-29 133.3 102 65.7
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 2.0e-29 133.3 98 67.3
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 4.4e-29 132.1 98 71.4
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 9.9e-29 131.0 102 67.6
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.9e-28 129.4 109 67.9
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 4.9e-28 128.6 85 74.1
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 4.9e-28 128.6 100 71.0
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 4.9e-28 128.6 100 71.0
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 4.9e-28 128.6 107 63.6
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 4.9e-28 128.6 105 65.7
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 4.9e-28 128.6 92 70.7
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 8.4e-28 127.9 101 65.3
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 1.1e-27 127.5 105 64.8
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 1.1e-27 127.5 106 64.2
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.4e-27 127.1 97 70.1
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.4e-27 127.1 97 70.1
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 2.4e-27 126.3 105 66.7
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 3.2e-27 125.9 127 54.3
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 3.2e-27 125.9 128 56.2
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 4.1e-27 125.6 109 67.0
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 7.1e-27 124.8 106 61.3
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 7.1e-27 124.8 109 58.7
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 7.1e-27 124.8 100 70.0
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 9.2e-27 124.4 104 65.4
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 1.6e-26 123.6 108 58.3
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.1e-26 123.2 103 68.9
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 2.7e-26 122.9 100 66.0
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 4.6e-26 122.1 87 73.6
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 1.3e-25 120.6 101 62.4
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 1.7e-25 120.2 114 57.9
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 2.3e-25 119.8 117 58.1
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 3.0e-25 119.4 83 72.3
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 8.6e-25 117.9 109 56.9
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 8.6e-25 117.9 100 64.0
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 8.6e-25 117.9 101 64.4
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 1.1e-24 117.5 87 69.0
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 1.1e-24 117.5 101 64.4
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 1.5e-24 117.1 86 69.8
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 1.5e-24 117.1 75 76.0
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 1.9e-24 116.7 101 63.4
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 1.9e-24 116.7 102 63.7
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.9e-24 116.7 113 56.6
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 2.5e-24 116.3 100 62.0
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 2.5e-24 116.3 100 62.0
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 2.5e-24 116.3 100 63.0
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 2.5e-24 116.3 102 62.7
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 3.3e-24 115.9 119 53.8
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 5.6e-24 115.2 100 61.0
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 7.3e-24 114.8 103 61.2
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 7.3e-24 114.8 113 55.8
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 9.6e-24 114.4 98 62.2
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 9.6e-24 114.4 99 61.6
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 9.6e-24 114.4 98 62.2
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 9.6e-24 114.4 91 67.0
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 9.6e-24 114.4 92 64.1
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 9.6e-24 114.4 102 62.7
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 1.2e-23 114.0 101 64.4
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 1.2e-23 114.0 97 62.9
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 2.1e-23 113.2 98 62.2
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 2.1e-23 113.2 99 65.7
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 2.8e-23 112.8 111 57.7
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 3.6e-23 112.5 101 61.4
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 3.6e-23 112.5 101 61.4
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 3.6e-23 112.5 98 60.2
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 3.6e-23 112.5 98 60.2
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 4.7e-23 112.1 98 61.2
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 6.2e-23 111.7 102 58.8
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 8.1e-23 111.3 97 64.9
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 8.1e-23 111.3 104 57.7
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 1.4e-22 110.5 111 60.4
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 3.1e-22 109.4 82 68.3
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 6.9e-22 108.2 84 70.2
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 4.4e-21 105.5 97 58.8
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 9.9e-21 104.4 113 53.1
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 9.9e-21 104.4 113 53.1
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 9.9e-21 104.4 104 56.7
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 1.3e-20 104.0 102 58.8
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 1.3e-20 104.0 102 58.8
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 2.2e-20 103.2 91 60.4
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 3.8e-20 102.4 115 54.8
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 6.4e-20 101.7 81 64.2
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 6.4e-20 101.7 103 58.3
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 6.4e-20 101.7 81 60.5
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 8.4e-20 101.3 69 72.5
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 1.1e-19 100.9 74 71.6
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 1.1e-19 100.9 74 71.6
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 1.4e-19 100.5 96 60.4
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 1.4e-19 100.5 96 60.4
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.9e-19 100.1 98 61.2
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.9e-19 100.1 98 61.2
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 3.2e-19 99.4 89 66.3
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 5.4e-19 98.6 101 57.4
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 5.4e-19 98.6 102 56.9
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 5.4e-19 98.6 71 70.4
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 7.1e-19 98.2 103 59.2
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 9.3e-19 97.8 103 55.3
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 1.2e-18 97.4 93 64.5
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 3.5e-18 95.9 110 53.6
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 7.8e-18 94.7 86 65.1
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.7e-17 93.6 99 58.6
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 2.3e-17 93.2 99 57.6
QL07p015856 Quercus lobata HOM05D003686 ORTHO05D004322 3.0e-17 92.8 65 70.8
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 3.0e-17 92.8 69 69.6
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 3.0e-17 92.8 69 69.6
QL93p0358_0018 Quercus lobata HOM05D003686 ORTHO05D004322 1.5e-16 90.5 65 69.2
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 2.5e-16 89.7 86 59.3
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 2.5e-16 89.7 95 52.6
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 1.3e-15 87.4 47 87.2
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.1e-14 84.3 89 53.9
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 2.6e-13 79.7 71 57.7
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 2.4e-11 73.2 45 73.3
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 2.4e-11 73.2 42 83.3
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 3.2e-11 72.8 45 75.6
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 9.3e-11 71.2 88 48.9


User provided reference genes

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