Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 6.4e-258 893.6 482 100.0
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 3.3e-238 828.2 482 93.8
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 4.5e-195 684.9 470 78.3
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 7.8e-187 657.5 512 73.6
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 1.4e-183 646.7 477 75.7
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 4.0e-175 618.6 439 76.5
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 9.2e-172 607.4 486 71.0
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 4.6e-171 605.1 443 74.3
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 2.4e-167 592.8 453 72.4
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 1.2e-166 590.5 445 73.5
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 1.3e-165 587.0 447 74.5
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.7e-165 586.6 488 69.1
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 7.1e-164 581.3 441 73.7
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 9.2e-164 580.9 488 68.4
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 6.0e-163 578.2 488 68.2
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.7e-162 576.6 444 71.4
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.9e-161 573.2 444 70.3
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 3.3e-161 572.4 444 71.8
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 1.6e-160 570.1 639 56.8
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 6.2e-160 568.2 447 71.1
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 1.4e-159 567.0 451 71.2
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 1.4e-159 567.0 441 71.7
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 6.9e-159 564.7 438 71.9
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 9.0e-159 564.3 449 71.0
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 3.4e-158 562.4 487 67.1
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 4.4e-158 562.0 444 71.4
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 5.8e-158 561.6 443 71.8
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 7.6e-158 561.2 488 66.4
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 1.7e-157 560.1 449 70.6
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 1.1e-156 557.4 453 70.2
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 1.4e-156 557.0 445 69.7
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 7.1e-156 554.7 442 71.5
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 9.3e-156 554.3 445 70.1
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 3.5e-155 552.4 469 64.6
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 3.5e-155 552.4 444 70.3
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 3.9e-154 548.9 443 69.3
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 5.1e-154 548.5 445 68.8
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 5.1e-154 548.5 441 67.6
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 2.8e-152 542.7 474 65.4
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 8.1e-152 541.2 437 69.3
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 1.8e-151 540.0 447 67.8
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 6.9e-151 538.1 437 68.0
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 2.0e-150 536.6 483 64.4
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 4.5e-150 535.4 445 67.6
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 5.4e-148 528.5 445 67.6
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 7.1e-148 528.1 423 71.9
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 9.3e-148 527.7 481 63.4
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 2.1e-147 526.6 446 65.5
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 3.5e-147 525.8 446 66.4
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 1.3e-146 523.9 446 66.6
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 1.3e-146 523.9 446 65.9
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 2.3e-146 523.1 349 81.7
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 1.9e-145 520.0 437 65.4
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 7.4e-145 518.1 437 65.7
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 1.1e-143 514.2 477 62.7
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 2.4e-143 513.1 442 67.9
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 2.4e-143 513.1 442 66.1
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 3.4e-142 509.2 447 64.2
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 7.6e-142 508.1 446 64.8
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 4.2e-140 502.3 437 62.5
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 7.9e-139 498.0 489 58.1
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 5.1e-138 495.4 444 61.5
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 1.5e-137 493.8 442 62.4
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 2.5e-137 493.0 440 64.5
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 5.6e-137 491.9 445 62.7
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 7.4e-137 491.5 445 65.6
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 2.1e-136 490.0 486 61.5
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 1.1e-135 487.6 445 62.9
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 1.4e-135 487.3 445 62.0
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 2.4e-135 486.5 445 63.8
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 3.1e-135 486.1 449 64.6
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 5.3e-135 485.3 437 65.9
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 1.5e-134 483.8 439 63.6
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 2.6e-134 483.0 449 59.7
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 2.2e-133 479.9 442 59.5
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 2.9e-133 479.6 440 59.3
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 7.1e-132 474.9 449 58.6
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 9.3e-132 474.6 446 59.4
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 1.2e-131 474.2 438 58.2
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 1.5e-129 467.2 442 58.1
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 2.8e-128 463.0 382 69.6
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 2.4e-127 459.9 439 57.6
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 5.3e-127 458.8 438 57.1
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 3.4e-126 456.1 448 56.7
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 2.9e-125 453.0 444 60.4
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 2.9e-125 453.0 382 68.6
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 5.7e-121 438.7 469 55.4
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 2.2e-117 426.8 338 68.6
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 3.0e-114 416.4 348 68.1
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 1.1e-113 414.5 324 68.8
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 8.2e-112 408.3 383 63.7
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 2.4e-111 406.8 444 54.5
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 4.1e-111 406.0 403 57.3
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 6.7e-106 388.7 320 67.5
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 2.6e-105 386.7 402 58.5
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 2.6e-102 376.7 319 69.0
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 6.3e-96 355.5 260 74.6
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 7.7e-86 322.0 404 47.0
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 2.9e-85 320.1 404 51.7
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 1.9e-84 317.4 280 64.6
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.1e-79 301.6 330 52.1
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 3.4e-73 280.0 336 55.1
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 7.5e-73 278.9 276 56.2
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 6.4e-72 275.8 426 43.2
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 9.5e-60 235.3 281 52.0
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 9.5e-60 235.3 354 46.0
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 1.4e-55 221.5 176 64.2
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 3.9e-53 213.4 603 31.2
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 2.3e-45 187.6 141 72.3
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 9.6e-44 182.2 257 45.9
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 1.4e-42 178.3 164 65.9
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 1.1e-39 168.7 103 79.6
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 6.0e-38 162.9 103 80.6
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 5.1e-37 159.8 92 83.7
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 5.6e-36 156.4 182 54.4
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 5.6e-36 156.4 188 59.0
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 7.4e-28 129.4 165 53.3
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 1.2e-25 122.1 103 64.1
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.9e-23 114.8 347 31.4
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 6.0e-22 109.8 92 60.9
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 9.6e-20 102.4 114 50.0
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 3.1e-18 97.4 57 80.7
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 3.4e-17 94.0 122 50.0
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 1.4e-15 88.6 46 84.8
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 2.5e-15 87.8 95 45.3
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 1.1e-12 79.0 44 81.8
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 1.1e-12 79.0 44 81.8
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 4.3e-12 77.0 83 45.8
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 3.7e-11 73.9 52 67.3
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 8.2e-11 72.8 41 85.4
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 1.4e-10 72.0 56 64.3
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 5.9e-09 66.6 42 66.7
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 3.8e-08 63.9 83 44.6
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 5.0e-08 63.5 33 87.9
Ah.14g086750 Amaranthus hybridus HOM05D005431 ORTHO05D006762 1.4e-07 62.0 34 88.2
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 9.4e-07 59.3 100 40.0
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 2.7e-06 57.8 59 50.8
RcHm_v2.0_Chr5g0076741 Rosa chinensis HOM05D005431 ORTHO05D006762 2.7e-06 57.8 63 55.6


User provided reference genes

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