Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 4.2e-201 704.5 365 100.0
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 1.0e-151 540.4 400 73.5
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 2.5e-145 519.2 409 68.5
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 2.8e-144 515.8 409 68.0
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 3.5e-139 498.8 416 65.1
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.3e-138 496.9 408 68.4
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 3.9e-138 495.4 417 65.0
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 1.2e-134 483.8 414 65.9
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 1.7e-130 469.9 418 65.8
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 8.9e-127 457.6 409 64.3
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 5.8e-126 454.9 353 69.7
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 2.9e-125 452.6 398 63.8
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 4.6e-123 445.3 423 59.8
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 1.0e-122 444.1 406 63.1
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 8.7e-122 441.0 427 61.6
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 1.5e-121 440.3 401 63.1
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 1.9e-121 439.9 406 63.3
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 3.3e-121 439.1 412 59.2
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 5.6e-121 438.3 404 61.1
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 2.8e-120 436.0 406 63.1
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 3.6e-120 435.6 399 60.4
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 1.1e-119 434.1 409 60.1
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 1.1e-119 434.1 324 75.3
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 5.3e-119 431.8 401 61.3
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 5.3e-119 431.8 405 61.0
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 9.0e-119 431.0 396 60.6
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 2.0e-118 429.9 410 59.8
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 5.8e-118 428.3 397 60.5
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 2.9e-117 426.0 396 59.6
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 3.8e-117 425.6 396 61.1
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 2.4e-116 422.9 390 62.1
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 2.4e-116 422.9 408 59.3
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 5.4e-116 421.8 396 60.6
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 1.2e-115 420.6 364 61.3
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 1.6e-115 420.2 380 62.1
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 2.7e-115 419.5 396 60.1
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 2.7e-115 419.5 417 59.5
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 3.5e-115 419.1 378 61.9
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 7.9e-115 417.9 396 59.8
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 7.9e-115 417.9 417 59.0
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 7.9e-115 417.9 417 59.0
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 1.3e-114 417.2 406 59.1
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 1.7e-114 416.8 328 67.4
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 3.9e-114 415.6 400 59.5
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 5.1e-114 415.2 384 61.2
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 4.3e-113 412.1 403 59.1
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 5.6e-113 411.8 386 60.4
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 5.6e-113 411.8 390 59.5
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 7.3e-113 411.4 311 70.7
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 9.6e-113 411.0 406 59.6
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 2.1e-112 409.8 421 57.7
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 2.4e-111 406.4 299 69.6
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 9.0e-111 404.4 408 58.3
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 1.2e-110 404.1 366 65.0
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 2.6e-110 402.9 331 65.3
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 2.6e-110 402.9 385 58.7
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 5.8e-110 401.7 419 55.8
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 5.8e-110 401.7 345 64.9
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 2.2e-109 399.8 331 64.7
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 2.9e-109 399.4 386 58.5
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 3.8e-109 399.1 298 71.5
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 1.4e-108 397.1 415 57.1
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 2.4e-108 396.4 307 67.8
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 3.2e-108 396.0 358 60.9
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 3.5e-107 392.5 327 64.5
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 7.9e-107 391.3 408 56.4
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.0e-106 391.0 401 56.9
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 6.7e-106 388.3 402 56.0
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 1.1e-105 387.5 408 56.4
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 3.3e-105 386.0 363 63.1
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 1.3e-104 384.0 391 56.3
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 4.0e-103 379.0 389 55.0
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 9.0e-103 377.9 333 61.3
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 1.2e-102 377.5 334 61.1
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 1.2e-102 377.5 334 61.1
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 5.8e-102 375.2 400 54.0
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 1.7e-101 373.6 403 54.1
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 2.2e-101 373.2 393 55.2
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 2.9e-101 372.9 416 51.9
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 6.5e-101 371.7 400 54.0
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 1.4e-100 370.5 307 63.8
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 1.2e-99 367.5 306 64.1
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 3.5e-99 365.9 401 54.1
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 7.9e-99 364.8 339 59.6
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 1.3e-98 364.0 352 57.1
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 3.0e-98 362.8 399 53.1
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 3.9e-98 362.5 350 58.0
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 1.6e-96 357.1 403 51.9
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 2.4e-95 353.2 264 68.9
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 5.3e-95 352.1 405 50.9
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 7.6e-94 348.2 401 51.1
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 2.9e-93 346.3 378 53.4
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 1.1e-92 344.4 285 66.0
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 4.2e-92 342.4 477 45.3
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 2.3e-90 336.7 418 48.8
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 1.6e-88 330.5 329 54.1
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 3.7e-88 329.3 248 66.9
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 4.1e-87 325.9 293 60.8
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 2.8e-80 303.1 344 52.9
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 2.0e-78 297.0 207 75.4
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 7.2e-76 288.5 320 50.3
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 1.6e-75 287.3 353 50.7
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 8.2e-72 275.0 261 60.9
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 2.7e-67 260.0 267 50.6
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 5.2e-66 255.8 218 61.0
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.8e-64 250.0 172 74.4
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 3.2e-60 236.5 315 44.1
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 5.5e-60 235.7 252 50.0
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 2.0e-49 200.7 185 57.3
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 2.8e-43 180.3 145 60.0
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 9.8e-41 171.8 217 48.8
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 1.2e-35 154.8 258 38.8
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 2.9e-32 143.7 83 79.5
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 2.8e-27 127.1 247 34.8
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 1.3e-24 118.2 325 30.5
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 3.6e-19 100.1 81 63.0
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 1.5e-12 78.2 245 27.3
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 6.2e-11 72.8 38 84.2
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 2.4e-10 70.9 47 63.8
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 2.0e-09 67.8 73 50.7
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 4.4e-09 66.6 57 59.6
Lalb_Chr21g0313531 Lupinus albus HOM05D006329 ORTHO05D008357 9.9e-09 65.5 104 44.2
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 1.9e-07 61.2 47 63.8


User provided reference genes

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