Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 2.8e-245 851.7 482 100.0
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 2.1e-240 835.5 482 93.8
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 4.3e-185 651.7 470 75.1
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 9.2e-180 634.0 511 70.8
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 5.6e-177 624.8 477 73.2
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 3.2e-172 609.0 439 76.8
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 8.9e-167 590.9 486 70.0
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 3.8e-165 585.5 443 71.6
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 1.0e-162 577.4 453 73.1
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 5.1e-162 575.1 445 72.4
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.1e-161 573.9 488 67.8
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 3.3e-161 572.4 488 67.8
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 2.1e-160 569.7 488 67.6
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 2.8e-160 569.3 447 72.9
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 6.2e-160 568.2 440 70.9
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.4e-156 557.0 444 68.5
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 3.2e-156 555.8 444 68.7
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 9.3e-156 554.3 449 70.4
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 9.3e-156 554.3 447 68.9
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 1.2e-155 553.9 444 69.6
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 2.1e-155 553.1 441 70.5
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 3.5e-155 552.4 444 69.8
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 7.8e-155 551.2 483 66.5
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 5.1e-154 548.5 453 70.2
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 8.7e-154 547.7 488 66.8
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 1.1e-153 547.4 451 69.4
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 5.6e-153 545.0 449 69.3
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 1.6e-152 543.5 445 68.8
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 2.1e-152 543.1 444 68.7
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 2.1e-152 543.1 639 54.6
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 3.6e-152 542.3 444 68.9
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 4.8e-152 542.0 443 70.2
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 1.4e-151 540.4 439 70.2
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 2.4e-151 539.7 443 68.8
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 3.1e-151 539.3 438 68.7
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 9.0e-151 537.7 441 66.4
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 1.2e-150 537.3 469 62.7
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 2.6e-150 536.2 444 66.7
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 9.9e-150 534.3 474 65.0
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 1.1e-148 530.8 444 66.4
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 1.6e-147 526.9 437 68.0
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 2.1e-147 526.6 482 62.4
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 7.9e-147 524.6 444 65.3
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 2.5e-145 519.6 437 65.9
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 5.6e-145 518.5 446 66.4
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 2.8e-144 516.2 446 65.2
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 1.8e-143 513.5 481 62.6
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 5.3e-143 511.9 446 64.1
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 9.0e-143 511.1 447 64.0
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 1.5e-142 510.4 437 65.7
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 3.4e-142 509.2 423 70.4
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 4.5e-142 508.8 444 64.9
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 4.9e-141 505.4 437 63.6
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 1.1e-140 504.2 477 62.5
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 9.3e-140 501.1 446 63.7
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 3.5e-139 499.2 441 64.4
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 7.9e-139 498.0 349 79.1
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 7.9e-139 498.0 446 63.2
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 1.9e-137 493.4 444 62.4
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 2.5e-137 493.0 442 66.3
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 1.8e-135 486.9 489 57.3
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 5.3e-135 485.3 449 63.5
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 9.0e-135 484.6 445 61.1
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 1.2e-134 484.2 450 63.3
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 3.4e-134 482.6 438 63.5
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 1.4e-132 477.2 442 63.3
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 1.4e-132 477.2 443 58.9
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 2.5e-132 476.5 442 60.4
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 4.2e-132 475.7 486 60.5
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 9.3e-132 474.6 444 59.9
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 1.6e-131 473.8 439 62.9
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 2.1e-131 473.4 444 61.3
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 3.9e-130 469.2 449 62.6
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 6.7e-130 468.4 448 58.3
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 4.3e-129 465.7 449 57.7
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 7.4e-129 464.9 442 57.7
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 2.8e-128 463.0 439 57.6
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 5.3e-127 458.8 445 57.3
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 5.3e-127 458.8 438 56.6
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 1.7e-125 453.8 438 58.0
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 5.0e-125 452.2 441 56.2
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 1.9e-124 450.3 438 57.3
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 7.9e-123 444.9 382 68.6
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 3.3e-121 439.5 447 55.0
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 4.3e-121 439.1 444 59.7
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 1.1e-119 434.5 382 67.3
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 3.1e-119 433.0 468 54.3
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 2.2e-112 410.2 338 66.0
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 7.0e-111 405.2 351 67.0
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 2.2e-109 400.2 444 52.9
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 6.5e-109 398.7 329 66.0
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 9.4e-108 394.8 402 56.0
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 1.4e-106 391.0 383 62.1
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 1.4e-103 380.9 320 67.2
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 5.3e-103 379.0 402 57.7
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 5.5e-100 369.0 295 71.9
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 6.5e-93 345.5 260 74.6
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 2.1e-83 313.9 404 46.0
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 4.7e-83 312.8 404 50.0
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 1.8e-82 310.8 280 64.3
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 7.8e-78 295.4 326 53.1
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 1.4e-71 274.6 335 53.7
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 1.3e-69 268.1 276 54.7
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 3.3e-68 263.5 426 41.8
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 2.3e-58 230.7 281 50.2
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 8.9e-58 228.8 349 46.7
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 6.0e-54 216.1 176 63.1
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 1.3e-53 214.9 611 30.6
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 3.5e-46 190.3 141 73.0
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.9e-44 184.5 257 47.1
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 3.8e-40 170.2 163 60.7
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 1.1e-39 168.7 103 79.6
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 6.0e-38 162.9 103 80.6
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 5.1e-37 159.8 92 83.7
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 8.1e-35 152.5 179 53.1
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.1e-31 142.1 188 56.4
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 1.0e-24 119.0 165 51.5
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 1.2e-22 112.1 103 59.2
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 6.0e-22 109.8 92 60.9
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 7.4e-20 102.8 114 50.0
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.8e-18 98.2 347 28.8
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 3.1e-18 97.4 57 80.7
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 1.4e-15 88.6 46 84.8
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 1.9e-15 88.2 122 47.5
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 2.5e-15 87.8 95 45.3
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 1.1e-12 79.0 44 81.8
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 1.1e-12 79.0 44 81.8
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 4.3e-12 77.0 83 45.8
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 3.7e-11 73.9 52 67.3
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 8.2e-11 72.8 41 85.4
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 1.4e-10 72.0 56 64.3
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 5.9e-09 66.6 42 66.7
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 3.8e-08 63.9 83 44.6
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 8.5e-08 62.8 66 50.0
Ah.14g086750 Amaranthus hybridus HOM05D005431 ORTHO05D006762 1.4e-07 62.0 34 88.2
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 4.2e-07 60.5 33 84.8
RcHm_v2.0_Chr5g0076741 Rosa chinensis HOM05D005431 ORTHO05D006762 1.6e-06 58.5 63 55.6


User provided reference genes

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