Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 2.4e-139 498.8 255 100.0
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 9.5e-51 204.5 141 76.6
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 2.8e-50 203.0 139 74.1
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 3.1e-49 199.5 141 73.8
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 3.1e-49 199.5 129 78.3
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.3e-47 194.1 141 73.8
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 8.3e-47 191.4 131 76.3
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.1e-46 191.0 138 76.1
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 1.1e-46 191.0 138 73.9
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 2.4e-46 189.9 142 72.5
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 2.4e-46 189.9 134 77.6
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 9.2e-46 188.0 129 76.7
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.6e-45 187.2 129 76.0
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 2.1e-45 186.8 192 58.9
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 2.1e-45 186.8 127 77.2
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 3.5e-45 186.0 135 72.6
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 6.0e-45 185.3 140 72.1
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 2.3e-44 183.3 129 75.2
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 3.9e-44 182.6 133 74.4
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 3.9e-44 182.6 141 68.8
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 8.6e-44 181.4 130 74.6
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 8.6e-44 181.4 130 74.6
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 8.6e-44 181.4 127 74.0
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 1.9e-43 180.3 115 80.0
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 1.9e-43 180.3 132 73.5
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 1.9e-43 180.3 127 74.8
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 3.3e-43 179.5 128 75.8
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 7.3e-43 178.3 140 66.4
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 1.2e-42 177.6 127 74.0
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 1.6e-42 177.2 138 64.5
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.6e-42 177.2 139 71.2
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 2.1e-42 176.8 139 69.8
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 2.1e-42 176.8 115 80.9
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 2.8e-42 176.4 141 68.1
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 2.8e-42 176.4 144 68.1
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 6.2e-42 175.3 132 69.7
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 1.1e-41 174.5 140 69.3
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 1.4e-41 174.1 127 72.4
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 1.4e-41 174.1 152 63.8
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 1.8e-41 173.7 132 71.2
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 2.4e-41 173.3 145 66.2
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 3.1e-41 172.9 97 88.7
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 4.0e-41 172.6 96 89.6
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 8.9e-41 171.4 130 71.5
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 8.9e-41 171.4 140 67.9
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 1.5e-40 170.6 128 71.9
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 2.0e-40 170.2 130 70.0
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 2.0e-40 170.2 142 63.4
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 2.6e-40 169.9 128 71.1
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 3.4e-40 169.5 126 70.6
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 4.4e-40 169.1 127 71.7
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 4.4e-40 169.1 156 60.3
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 5.8e-40 168.7 128 66.4
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 5.8e-40 168.7 139 66.9
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 9.9e-40 167.9 139 63.3
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 2.2e-39 166.8 130 70.0
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 2.2e-39 166.8 130 64.6
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 2.9e-39 166.4 128 70.3
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 2.9e-39 166.4 128 70.3
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 2.9e-39 166.4 138 65.2
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 2.9e-39 166.4 138 65.2
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 6.4e-39 165.2 135 69.6
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 6.4e-39 165.2 97 84.5
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 8.4e-39 164.9 131 68.7
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 1.4e-38 164.1 124 71.8
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 1.9e-38 163.7 127 70.1
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 2.4e-38 163.3 133 69.2
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 3.2e-38 162.9 101 79.2
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 3.2e-38 162.9 139 65.5
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 2.1e-37 160.2 132 65.2
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 2.1e-37 160.2 141 63.1
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 2.1e-37 160.2 114 72.8
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.1e-37 160.2 138 62.3
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 3.5e-37 159.5 137 67.9
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 4.6e-37 159.1 131 65.6
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 4.6e-37 159.1 113 68.1
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 6.0e-37 158.7 96 77.1
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 6.0e-37 158.7 157 59.2
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 7.8e-37 158.3 128 67.2
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 7.8e-37 158.3 116 69.8
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 7.8e-37 158.3 141 62.4
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 1.0e-36 157.9 99 78.8
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 1.0e-36 157.9 139 63.3
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 1.0e-36 157.9 115 70.4
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 1.3e-36 157.5 96 77.1
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 1.7e-36 157.1 96 77.1
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 1.7e-36 157.1 140 62.9
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.3e-36 156.8 150 59.3
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 2.3e-36 156.8 126 69.8
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 3.0e-36 156.4 139 61.9
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.0e-36 156.4 123 69.1
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.0e-36 156.4 123 69.1
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 3.0e-36 156.4 97 72.2
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.9e-36 156.0 133 63.2
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 8.7e-36 154.8 129 65.9
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 8.7e-36 154.8 122 71.3
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 1.1e-35 154.5 99 76.8
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 1.5e-35 154.1 174 54.0
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 1.9e-35 153.7 94 76.6
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 2.5e-35 153.3 94 76.6
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 2.5e-35 153.3 94 76.6
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 3.3e-35 152.9 147 60.5
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 5.6e-35 152.1 153 58.2
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 5.6e-35 152.1 113 70.8
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 5.6e-35 152.1 113 70.8
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 5.6e-35 152.1 132 62.9
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 1.3e-34 151.0 119 68.9
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 1.6e-34 150.6 152 57.9
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 2.1e-34 150.2 141 61.0
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 4.8e-34 149.1 133 61.7
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 4.8e-34 149.1 124 66.9
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 8.1e-34 148.3 169 51.5
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 1.1e-33 147.9 145 59.3
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 2.4e-33 146.7 130 65.4
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 2.4e-33 146.7 159 54.7
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 2.4e-33 146.7 137 62.8
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 3.1e-33 146.4 130 66.9
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 3.1e-33 146.4 129 62.8
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 6.9e-33 145.2 175 52.6
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 2.0e-32 143.7 167 55.7
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 2.0e-32 143.7 140 60.0
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 3.4e-32 142.9 130 62.3
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 3.4e-32 142.9 140 60.0
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 5.8e-32 142.1 146 54.8
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 5.8e-32 142.1 138 58.7
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 5.8e-32 142.1 138 58.7
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 9.9e-32 141.4 139 62.6
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 2.9e-31 139.8 127 63.0
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 1.1e-30 137.9 156 56.4
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 2.4e-30 136.7 170 49.4
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 4.2e-30 136.0 103 71.8
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 5.4e-30 135.6 137 56.2
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 5.4e-30 135.6 139 55.4
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 7.1e-30 135.2 136 56.6
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 9.3e-30 134.8 82 79.3
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.6e-29 134.0 145 57.2
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.6e-29 134.0 145 57.2
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.6e-29 134.0 136 56.6
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 1.6e-29 134.0 144 59.0
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 2.1e-29 133.7 167 52.1
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 7.9e-29 131.7 71 87.3
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 7.9e-29 131.7 140 60.0
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 1.3e-28 131.0 149 55.0
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 1.3e-28 131.0 125 60.0
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 6.6e-28 128.6 144 55.6
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 7.3e-27 125.2 99 66.7
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 7.3e-27 125.2 99 66.7
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 3.6e-26 122.9 168 47.6
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 4.8e-26 122.5 116 63.8
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 8.1e-26 121.7 184 45.7
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 1.8e-25 120.6 126 55.6
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 1.8e-25 120.6 126 55.6
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 4.0e-25 119.4 95 64.2
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 9.0e-25 118.2 79 72.2
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 1.2e-24 117.9 132 54.5
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 1.5e-24 117.5 62 85.5
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 2.6e-24 116.7 127 54.3
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 2.6e-24 116.7 127 54.3
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 2.6e-24 116.7 140 53.6
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 2.6e-24 116.7 140 53.6
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 5.8e-24 115.5 116 57.8
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 9.9e-24 114.8 147 49.7
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 9.9e-24 114.8 62 87.1
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 2.2e-23 113.6 123 54.5
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 4.9e-23 112.5 94 59.6
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 4.2e-22 109.4 137 48.9
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.1e-21 107.1 123 53.7
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 6.0e-21 105.5 107 54.2
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 5.1e-20 102.4 127 54.3
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 1.9e-19 100.5 86 69.8
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 9.6e-19 98.2 109 55.0
Cre09.g401300 Chlamydomonas reinhardtii HOM05D003686 ORTHO05D004322 7.1e-14 82.0 41 82.9
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.6e-13 80.9 138 47.1
Lj5g0025755 Lotus japonicus HOM05D003686 ORTHO05D009933 4.6e-13 79.3 70 64.3
QL07p015856 Quercus lobata HOM05D003686 ORTHO05D004322 7.4e-11 72.0 72 59.7
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.8e-10 70.1 117 48.7
QL93p0358_0018 Quercus lobata HOM05D003686 ORTHO05D004322 3.7e-10 69.7 72 58.3
PSO384G1681 Papaver somniferum HOM05D003686 ORTHO05D004322 2.4e-09 67.0 91 49.5
PSO384G1563 Papaver somniferum HOM05D003686 ORTHO05D004322 7.6e-08 62.0 121 41.3
PSO384G1591 Papaver somniferum HOM05D000185 ORTHO05D000105 7.6e-08 62.0 121 41.3
PSO384G1636 Papaver somniferum HOM05D000185 ORTHO05D000105 6.5e-07 58.9 121 40.5
PRCOL_00005459 Prasinoderma coloniale HOM05D003686 ORTHO05D004322 7.2e-06 55.5 123 35.8


User provided reference genes

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