Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 2.7e-231 805.1 433 100.0
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 6.0e-154 548.1 472 64.6
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.6e-146 523.5 440 65.2
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 8.6e-145 517.7 440 63.9
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 8.1e-143 511.1 442 64.0
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 2.4e-142 509.6 463 62.0
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 2.4e-142 509.6 454 65.0
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 4.0e-142 508.8 455 63.3
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 1.2e-141 507.3 451 62.1
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 2.0e-141 506.5 469 62.5
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 1.7e-140 503.4 443 63.4
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 2.2e-140 503.1 453 62.0
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 8.4e-140 501.1 447 64.4
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 8.4e-140 501.1 450 64.2
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 1.1e-139 500.7 440 64.5
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 1.2e-138 497.3 454 62.3
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 2.7e-138 496.1 444 64.6
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 6.0e-138 495.0 429 65.7
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 7.8e-138 494.6 445 64.3
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 2.3e-137 493.0 438 62.6
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 3.0e-137 492.7 456 61.4
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 3.0e-137 492.7 452 62.2
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 3.0e-137 492.7 441 62.6
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 4.3e-136 488.8 471 59.4
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 9.6e-136 487.6 449 62.4
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 4.8e-135 485.3 466 59.0
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 6.2e-135 485.0 444 63.3
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 1.8e-134 483.4 438 63.5
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 3.1e-134 482.6 461 61.2
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 5.3e-134 481.9 442 63.1
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 9.0e-134 481.1 468 60.5
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 2.0e-133 479.9 458 61.8
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 5.8e-133 478.4 468 60.5
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 5.8e-133 478.4 444 59.2
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 9.9e-133 477.6 450 63.1
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 2.9e-132 476.1 436 61.0
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 1.1e-131 474.2 438 62.1
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 1.1e-131 474.2 453 59.6
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 3.2e-131 472.6 439 60.6
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 5.4e-131 471.9 485 58.4
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 9.3e-131 471.1 438 62.3
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 4.6e-130 468.8 446 60.8
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 4.6e-130 468.8 454 56.8
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 1.0e-129 467.6 456 61.2
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 1.7e-129 466.8 440 58.9
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 3.0e-129 466.1 451 62.3
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 8.7e-129 464.5 443 59.4
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 1.1e-128 464.2 437 63.2
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 2.5e-128 463.0 444 57.2
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 4.3e-128 462.2 451 60.5
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 5.6e-128 461.8 436 62.6
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 1.3e-127 460.7 454 58.6
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 2.1e-127 459.9 467 59.3
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 2.8e-127 459.5 438 60.5
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 8.1e-127 458.0 446 59.9
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 1.1e-126 457.6 436 61.2
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 1.2e-125 454.1 439 62.4
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 2.0e-125 453.4 446 60.1
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 2.0e-125 453.4 447 55.7
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 2.6e-125 453.0 442 57.2
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 2.6e-125 453.0 436 60.6
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 7.6e-125 451.4 438 59.4
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 9.9e-125 451.1 447 55.5
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 1.4e-123 447.2 441 60.1
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 2.4e-123 446.4 441 55.6
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 4.2e-123 445.7 438 59.4
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 1.2e-122 444.1 439 56.3
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 1.6e-122 443.7 441 58.3
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 2.1e-122 443.4 436 55.7
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 1.0e-121 441.0 441 54.6
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 3.9e-121 439.1 428 61.9
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 4.3e-120 435.6 439 54.2
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 1.3e-119 434.1 430 58.1
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 8.1e-119 431.4 489 53.8
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 4.0e-118 429.1 444 52.3
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 2.0e-117 426.8 438 57.8
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 2.9e-116 422.9 449 53.0
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 4.2e-115 419.1 433 53.1
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 2.1e-114 416.8 446 57.8
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 3.5e-114 416.0 416 58.2
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 1.8e-113 413.7 444 51.6
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 1.9e-112 410.2 614 46.1
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 1.2e-109 401.0 434 52.3
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 2.1e-106 390.2 327 65.4
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 6.7e-105 385.2 469 52.0
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 1.5e-104 384.0 326 66.3
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 2.8e-103 379.8 326 68.1
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 9.0e-102 374.8 384 59.9
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 1.3e-100 370.9 451 53.2
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 2.2e-100 370.2 376 59.8
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 1.2e-98 364.4 322 60.2
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 1.5e-93 347.4 403 50.6
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 3.0e-89 333.2 305 63.6
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 1.4e-86 324.3 349 59.9
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 6.5e-84 315.5 393 53.9
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 4.4e-80 302.8 319 60.5
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 5.7e-80 302.4 395 44.1
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 1.7e-79 300.8 402 47.8
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.1e-75 288.1 265 65.7
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 3.6e-74 283.1 332 48.5
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 2.4e-70 270.4 262 61.5
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 5.4e-70 269.2 281 53.0
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.8e-62 244.2 416 39.9
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 1.8e-57 227.6 287 48.1
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 3.4e-56 223.4 336 46.1
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 5.4e-54 216.1 599 31.4
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 8.9e-49 198.7 173 60.1
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 6.2e-42 176.0 342 40.9
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 6.4e-39 166.0 99 77.8
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 6.4e-39 166.0 106 73.6
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 3.2e-38 163.7 95 81.1
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 5.6e-35 152.9 263 41.4
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 3.4e-32 143.7 162 58.0
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 4.1e-30 136.7 141 53.9
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.3e-28 131.7 180 56.1
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 4.7e-26 123.2 180 47.8
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 8.9e-25 119.0 101 59.4
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.5e-19 101.7 355 29.9
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 3.6e-18 97.1 118 44.1
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 3.1e-17 94.0 129 46.5
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 6.9e-17 92.8 110 49.1
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 1.2e-16 92.0 54 77.8
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 5.8e-16 89.7 110 45.5
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 1.1e-14 85.5 46 82.6
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 3.0e-12 77.4 49 71.4
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 3.0e-12 77.4 49 71.4
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 1.1e-11 75.5 84 41.7
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 3.3e-11 73.9 123 46.3
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 9.6e-11 72.4 52 63.5
Ah.14g086750 Amaranthus hybridus HOM05D005431 ORTHO05D006762 6.2e-10 69.7 42 73.8
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 1.1e-09 68.9 56 55.4
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 1.1e-09 68.9 50 60.0
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 5.3e-09 66.6 41 73.2
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 4.5e-08 63.5 86 45.3
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 7.6e-08 62.8 34 82.4
RcHm_v2.0_Chr5g0076741 Rosa chinensis HOM05D005431 ORTHO05D006762 5.5e-06 56.6 49 61.2


User provided reference genes

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