Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1227.20 Capsicum annuum HOM05D005550 ORTHO05D006679 8.6e-182 640.2 322 100.0
Sopen08g003270 Solanum pennellii HOM05D005550 ORTHO05D006679 8.3e-177 623.6 321 96.9
Solyc08g007330.3 Solanum lycopersicum HOM05D005550 ORTHO05D006679 7.8e-175 617.1 321 96.0
Nitab4.5_0000712g0130 Nicotiana tabacum HOM05D005550 ORTHO05D006679 1.1e-163 580.1 346 84.7
Hma1.2p1_1136F.1_g260520 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 6.6e-158 560.8 321 86.6
CiPaw.11G081300 Carya illinoinensis HOM05D005550 ORTHO05D006679 2.5e-157 558.9 321 83.8
Actinidia02146 Actinidia chinensis HOM05D005550 ORTHO05D006679 3.3e-157 558.5 321 85.0
Cc08_g12230 Coffea canephora HOM05D005550 ORTHO05D006679 1.6e-156 556.2 322 85.7
Lj2A221T32 Lonicera japonica HOM05D005550 ORTHO05D006679 2.1e-156 555.8 321 85.7
Potri.001G156200 Populus trichocarpa HOM05D005550 ORTHO05D006679 3.6e-156 555.1 321 82.9
Hma1.2p1_1136F.1_g260510 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 8.9e-155 550.4 332 83.4
Peaxi162Scf00102g01071 Petunia axillaris HOM05D005550 ORTHO05D006679 2.0e-154 549.3 321 86.3
HanXRQChr06g0164431 Helianthus annuus HOM05D005550 ORTHO05D006679 2.6e-154 548.9 332 80.7
Manes.01G082400 Manihot esculenta HOM05D005550 ORTHO05D006679 7.6e-154 547.4 321 81.9
Duzib068G0290 Durio zibethinus HOM05D005550 ORTHO05D006679 1.7e-153 546.2 321 83.2
Thecc.03G248800 Theobroma cacao HOM05D005550 ORTHO05D006679 1.7e-153 546.2 321 82.9
Atru.chr9.1288 Acer truncatum HOM05D005550 ORTHO05D006679 2.9e-153 545.4 321 81.9
CSS0014382 Camellia sinensis var. sinensis HOM05D005550 ORTHO05D006679 2.9e-153 545.4 321 83.2
Gorai.008G234100 Gossypium raimondii HOM05D005550 ORTHO05D006679 4.9e-153 544.7 321 81.3
ECA248G1640 Erigeron canadensis HOM05D005550 ORTHO05D006679 1.4e-152 543.1 321 81.6
Gohir.D12G218532 Gossypium hirsutum HOM05D005550 ORTHO05D006679 1.9e-152 542.7 321 81.3
TAR375G0818 Trochodendron aralioides HOM05D005550 ORTHO05D006679 1.9e-152 542.7 321 81.3
QL12p011636 Quercus lobata HOM05D005550 ORTHO05D006679 2.4e-152 542.3 344 79.4
Ciclev10018920m.g Citrus clementina HOM05D005550 ORTHO05D006679 9.3e-152 540.4 321 81.3
CANSAT21G2208 Cannabis sativa HOM05D005550 ORTHO05D006679 2.7e-151 538.9 324 81.5
Rhsim11G0009700 Rhododendron simsii HOM05D005550 ORTHO05D006679 4.6e-151 538.1 321 82.6
PGR042G2104 Punica granatum HOM05D005550 ORTHO05D006679 7.8e-151 537.3 321 81.3
Prupe.5G066100 Prunus persica HOM05D005550 ORTHO05D006679 3.9e-150 535.0 321 78.8
Eucgr.E00409 Eucalyptus grandis HOM05D005550 ORTHO05D006679 8.7e-150 533.9 321 80.4
Sc22g0000960 Simmondsia chinensis HOM05D005550 ORTHO05D006679 8.7e-150 533.9 321 80.7
TWI15G1253 Tripterygium wilfordii HOM05D005550 ORTHO05D006679 8.7e-150 533.9 321 80.7
FvH4_5g19230 Fragaria vesca HOM05D005550 ORTHO05D006679 1.9e-149 532.7 321 78.2
MELO3C005519.2 Cucumis melo HOM05D005550 ORTHO05D006679 2.5e-149 532.3 321 80.1
Migut.A01122 Erythranthe guttata HOM05D005550 ORTHO05D006679 4.3e-149 531.6 320 80.9
RcHm_v2.0_Chr7g0203731 Rosa chinensis HOM05D005550 ORTHO05D006679 4.3e-149 531.6 321 78.5
THA.LOC104812808 Tarenaya hassleriana HOM05D005550 ORTHO05D006679 7.3e-149 530.8 321 80.1
Thhalv10024454m.g Eutrema salsugineum HOM05D005550 ORTHO05D006679 1.3e-148 530.0 321 80.1
Sed0012504 Sechium edule HOM05D005550 ORTHO05D006679 1.6e-148 529.6 321 79.4
Carub.0007s2403 Capsella rubella HOM05D005550 ORTHO05D006679 2.8e-148 528.9 321 79.1
SGA_v2.0_scaffold104G30171 Striga asiatica HOM05D005550 ORTHO05D006679 1.1e-147 526.9 334 77.8
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 1.8e-147 526.2 321 80.7
ClCG01G004190 Citrullus lanatus HOM05D005550 ORTHO05D006679 1.8e-147 526.2 323 78.9
PSO782G0795 Papaver somniferum HOM05D005550 ORTHO05D006679 1.8e-147 526.2 322 79.8
Aa31LG6G120 Aethionema arabicum HOM05D005550 ORTHO05D006679 6.9e-147 524.2 321 78.8
BcaB04g18410 Brassica carinata HOM05D005550 ORTHO05D006679 2.0e-146 522.7 321 78.2
AT4G17380 Arabidopsis thaliana HOM05D005550 ORTHO05D006679 2.6e-146 522.3 321 77.9
AL7G37330 Arabidopsis lyrata HOM05D005550 ORTHO05D006679 3.4e-146 521.9 321 77.9
CsaV3_5G004390 Cucumis sativus L. HOM05D005550 ORTHO05D006679 4.4e-146 521.5 327 78.3
BcaC07g38064 Brassica carinata HOM05D005550 ORTHO05D006679 5.8e-146 521.2 321 78.2
MBI04_g09523_MAGBIO Magnolia biondii HOM05D005550 ORTHO05D006679 5.8e-146 521.2 332 76.5
CARHR223990 Cardamine hirsuta HOM05D005550 ORTHO05D006679 9.9e-146 520.4 321 77.9
vmacro00189 Vaccinium macrocarpon HOM05D005550 ORTHO05D006679 1.3e-145 520.0 387 70.5
PSO063G2362 Papaver somniferum HOM05D005550 ORTHO05D006679 2.9e-145 518.8 321 79.1
Lsat_1_v5_gn_3_1200 Lactuca sativa HOM05D005550 ORTHO05D006679 4.9e-145 518.1 324 78.1
BolC8t48465H Brassica oleracea HOM05D005550 ORTHO05D006679 6.4e-145 517.7 321 77.6
Aqoxy7G00819 Aquilegia oxysepala HOM05D005550 ORTHO05D006679 1.1e-144 516.9 343 75.2
A08p13130 Brassica napus HOM05D005550 ORTHO05D006679 1.4e-144 516.5 321 77.6
BraA08t33293Z Brassica rapa HOM05D005550 ORTHO05D006679 2.4e-144 515.8 321 77.3
Glyma.11G034600 Glycine max HOM05D005550 ORTHO05D006679 7.1e-144 514.2 321 78.2
VMungo1215G0570 Vigna mungo HOM05D005550 ORTHO05D006679 7.1e-144 514.2 321 77.9
Lj2g0021636 Lotus japonicus HOM05D005550 ORTHO05D006679 2.1e-143 512.7 321 77.3
arahy.Tifrunner.gnm1.ann1.7NLF36 Arachis hypogaea HOM05D005550 ORTHO05D006679 6.0e-143 511.1 321 76.6
Nn6g33903 Nelumbo nucifera HOM05D005550 ORTHO05D006679 6.0e-143 511.1 321 77.3
TPR.G18117 Trifolium pratense HOM05D005550 ORTHO05D006679 9.6e-141 503.8 321 75.4
Medtr5g012900 Medicago truncatula HOM05D005550 ORTHO05D006679 1.3e-140 503.4 322 75.2
Psat2g176640 Pisum sativum HOM05D005550 ORTHO05D006679 2.4e-139 499.2 321 74.8
AUR62019968 Chenopodium quinoa HOM05D005550 ORTHO05D006679 3.1e-139 498.8 321 78.5
Ca_24591_v3 Cicer arietinum L. HOM05D005550 ORTHO05D006679 3.1e-139 498.8 320 75.0
AUR62007105 Chenopodium quinoa HOM05D005550 ORTHO05D006679 5.3e-139 498.0 321 78.8
arahy.Tifrunner.gnm1.ann1.XE7N8H Arachis hypogaea HOM05D005550 ORTHO05D006679 6.9e-139 497.7 332 73.8
DCAR_006840 Daucus carota HOM05D005550 ORTHO05D006679 6.9e-139 497.7 322 77.0
Zm00001eb105070 Zea mays HOM05D005550 ORTHO05D006679 1.5e-138 496.5 321 73.5
MD04G1062200 Malus domestica HOM05D005550 ORTHO05D006679 2.9e-137 492.3 321 74.5
ATR0057G027 Amborella trichopoda HOM05D005550 ORTHO05D006679 6.0e-135 484.6 321 72.0
FAN08G0299 Fragaria x ananassa HOM05D005550 ORTHO05D006679 3.9e-134 481.9 398 62.8
Phvul.002G057100 Phaseolus vulgaris HOM05D005550 ORTHO05D006679 6.2e-132 474.6 321 73.8
Sabra01G0134700 Salix brachista HOM05D005550 ORTHO05D006679 1.1e-131 473.8 301 78.1
HPP92_025386 Vanilla planifolia HOM05D005550 ORTHO05D006679 3.4e-130 468.8 321 68.8
FAN04G3230 Fragaria x ananassa HOM05D005550 ORTHO05D006679 4.6e-127 458.4 381 61.7
EL10Ac5g12365 Beta vulgaris HOM05D005550 ORTHO05D006679 8.7e-126 454.1 321 72.0
SalBow6G3355 Salvia bowleyana HOM05D005550 ORTHO05D006679 7.4e-125 451.1 321 69.5
FAN18G0162 Fragaria x ananassa HOM05D005550 ORTHO05D006679 4.8e-124 448.4 331 68.6
MSTRG.12114 Avicennia marina HOM05D005550 ORTHO05D006679 7.2e-120 434.5 278 79.9
Nitab4.5_0002225g0010 Nicotiana tabacum HOM05D005550 ORTHO05D006679 6.1e-119 431.4 347 66.9
AagrBONN_evm.TU.Sc2ySwM_344.184 Anthoceros agrestis HOM05D005550 ORTHO05D006679 9.7e-101 370.9 322 58.1
GSVIVG01004727001 Vitis vinifera HOM05D005550 ORTHO05D006679 4.8e-100 368.6 209 84.7
PGSC0003DMG400012503 Solanum tuberosum HOM05D005550 ORTHO05D006679 8.2e-100 367.9 187 96.8
SHI20465 Sapria himalayana HOM05D005550 ORTHO05D006679 1.1e-99 367.5 331 59.2
Gohir.A12G215932 Gossypium hirsutum HOM05D005550 ORTHO05D006679 1.8e-99 366.7 212 81.1
Lalb_Chr16g0379511 Lupinus albus HOM05D005550 ORTHO05D006679 2.0e-98 363.2 237 74.3
Mapoly0001s0167 Marchantia polymorpha HOM05D005550 ORTHO05D006679 4.2e-96 355.5 322 56.5
Pp3c2_940 Physcomitrium patens HOM05D005550 ORTHO05D006679 1.3e-92 344.0 322 55.9
SMO340G0170 Selaginella moellendorffii HOM05D005550 ORTHO05D006679 1.8e-91 340.1 322 54.3
CDE04G2441 Ceratophyllum demersum HOM05D005550 ORTHO05D006679 4.7e-79 298.9 323 52.6
COL.COLO4_37144 Corchorus olitorius HOM05D005550 ORTHO05D006679 9.8e-61 238.0 139 84.9
CBR_g547 Chara braunii HOM05D005550 ORTHO05D006679 4.6e-58 229.2 332 40.4
FAN13G1102 Fragaria x ananassa HOM05D005550 ORTHO05D006679 3.0e-57 226.5 182 65.4
unitig_744.g24474 Utricularia gibba HOM05D005550 ORTHO05D006679 7.6e-45 185.3 223 48.0
Hund11606 Selenicereus undatus HOM05D005550 ORTHO05D006679 1.1e-38 164.9 120 70.8
Cpa.g.sc29.182 Carica papaya HOM05D005550 ORTHO05D006679 1.2e-37 161.4 99 79.8
Hund11605 Selenicereus undatus HOM05D005550 ORTHO05D006679 3.5e-34 149.8 99 74.7
Cpa.g.sc29.183 Carica papaya HOM05D005550 ORTHO05D006679 3.9e-33 146.4 91 75.8
Haze_16328 Corylus avellana HOM05D005550 ORTHO05D006679 3.3e-32 143.3 83 81.9
Gohir.A12G215866 Gossypium hirsutum HOM05D005550 ORTHO05D006679 2.8e-31 140.2 80 81.2
Lalb_Chr16g0379501 Lupinus albus HOM05D005550 ORTHO05D006679 3.6e-31 139.8 90 76.7
PRCOL_00003604 Prasinoderma coloniale HOM05D005550 ORTHO05D006679 1.7e-28 131.0 411 25.3
MCO13G611 Micromonas commoda HOM05D005550 ORTHO05D006679 4.6e-26 122.9 308 30.2
SEGI_35945 Sequoiadendron giganteum HOM05D005550 ORTHO05D006679 1.0e-25 121.7 116 54.3
Cfa026892 Carpinus fangiana HOM05D001061 ORTHO05D006679 6.2e-23 112.5 228 29.4
SEGI_10856 Sequoiadendron giganteum HOM05D005550 ORTHO05D006679 3.2e-19 100.1 67 67.2
SEGI_25288 Sequoiadendron giganteum HOM05D005550 ORTHO05D006679 2.1e-18 97.4 70 65.7
Nn2g12866 Nelumbo nucifera HOM05D005550 ORTHO05D006679 3.7e-15 86.7 53 73.6
Cre16.g692550 Chlamydomonas reinhardtii HOM05D005550 ORTHO05D006679 2.3e-09 67.4 264 26.9


User provided reference genes

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