Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 3.1e-54 215.7 191 100.0
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 2.2e-52 209.5 191 89.5
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 7.1e-51 204.5 192 77.1
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 2.3e-49 199.5 190 76.8
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 1.1e-48 197.2 190 80.0
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 1.1e-48 197.2 190 84.2
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 1.5e-48 196.8 97 95.9
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 1.9e-48 196.4 195 80.5
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 1.9e-48 196.4 195 80.5
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 2.1e-47 193.0 190 75.3
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 2.1e-47 193.0 190 75.3
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 2.1e-47 193.0 195 81.0
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 4.8e-47 191.8 95 95.8
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 1.4e-46 190.3 101 92.1
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 3.8e-44 182.2 102 87.3
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 6.5e-44 181.4 101 88.1
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 2.1e-42 176.4 109 80.7
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 2.1e-42 176.4 102 85.3
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.0e-41 174.1 115 76.5
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 2.3e-41 172.9 194 77.8
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.3e-41 172.9 109 80.7
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 2.3e-41 172.9 109 80.7
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 3.0e-41 172.6 100 89.0
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 3.9e-41 172.2 114 76.3
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 3.9e-41 172.2 109 78.0
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 5.1e-41 171.8 109 78.9
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 6.7e-41 171.4 115 75.7
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 8.7e-41 171.0 110 77.3
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.1e-40 170.6 115 74.8
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 1.1e-40 170.6 115 74.8
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.5e-40 170.2 115 74.8
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 1.9e-40 169.9 113 75.2
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.5e-40 169.5 109 79.8
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 2.5e-40 169.5 110 76.4
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.3e-40 169.1 110 74.5
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.3e-40 169.1 110 74.5
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 3.3e-40 169.1 108 76.9
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 4.3e-40 168.7 110 76.4
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 9.7e-40 167.5 112 77.7
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 1.6e-39 166.8 109 74.3
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 1.6e-39 166.8 108 76.9
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 2.2e-39 166.4 115 73.0
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 2.2e-39 166.4 114 74.6
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 3.7e-39 165.6 119 70.6
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 4.8e-39 165.2 100 86.0
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 6.3e-39 164.9 89 87.6
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 6.3e-39 164.9 89 87.6
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 6.3e-39 164.9 89 87.6
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 8.2e-39 164.5 99 81.8
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 8.2e-39 164.5 99 81.8
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 8.2e-39 164.5 97 82.5
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 1.1e-38 164.1 103 78.6
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 1.1e-38 164.1 120 70.0
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.4e-38 163.7 113 72.6
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 1.8e-38 163.3 89 86.5
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 1.8e-38 163.3 99 80.8
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 1.8e-38 163.3 119 69.7
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 3.1e-38 162.5 90 86.7
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 4.1e-38 162.2 110 72.7
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 6.9e-38 161.4 113 69.9
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 6.9e-38 161.4 113 72.6
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 6.9e-38 161.4 107 74.8
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 9.1e-38 161.0 115 70.4
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 9.1e-38 161.0 115 70.4
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 1.5e-37 160.2 113 69.9
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 2.0e-37 159.8 111 71.2
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 2.0e-37 159.8 104 75.0
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 2.0e-37 159.8 113 71.7
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 2.6e-37 159.5 109 69.7
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 4.5e-37 158.7 115 70.4
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 4.5e-37 158.7 117 70.9
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 5.9e-37 158.3 96 77.1
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 5.9e-37 158.3 115 70.4
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 7.7e-37 157.9 110 78.2
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 7.7e-37 157.9 115 70.4
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.0e-36 157.5 94 79.8
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 1.7e-36 156.8 87 86.2
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 2.9e-36 156.0 80 95.0
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 5.0e-36 155.2 93 82.8
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 6.5e-36 154.8 115 67.0
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 1.1e-35 154.1 114 69.3
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 1.1e-35 154.1 88 84.1
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 1.9e-35 153.3 87 85.1
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 1.9e-35 153.3 112 69.6
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 2.5e-35 152.9 87 81.6
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 2.5e-35 152.9 114 68.4
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 2.5e-35 152.9 113 69.9
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 3.2e-35 152.5 88 83.0
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 3.2e-35 152.5 113 68.1
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 4.2e-35 152.1 97 79.4
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 4.2e-35 152.1 97 79.4
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 4.2e-35 152.1 87 82.8
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 4.2e-35 152.1 100 75.0
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 5.5e-35 151.8 102 73.5
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 7.2e-35 151.4 120 66.7
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 9.4e-35 151.0 110 71.8
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 9.4e-35 151.0 99 76.8
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 9.4e-35 151.0 88 83.0
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 9.4e-35 151.0 88 83.0
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 1.2e-34 150.6 102 75.5
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 1.2e-34 150.6 99 76.8
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 2.1e-34 149.8 102 74.5
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 2.1e-34 149.8 93 79.6
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 2.7e-34 149.4 113 67.3
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 4.6e-34 148.7 100 72.0
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 4.6e-34 148.7 88 80.7
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 6.1e-34 148.3 115 68.7
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.0e-33 147.5 108 68.5
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.0e-33 147.5 108 68.5
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 1.0e-33 147.5 100 74.0
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 1.4e-33 147.1 114 69.3
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 1.8e-33 146.7 111 66.7
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 3.0e-33 146.0 96 77.1
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 5.1e-33 145.2 107 68.2
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 5.1e-33 145.2 107 68.2
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 5.1e-33 145.2 96 72.9
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 1.1e-32 144.1 97 75.3
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 1.5e-32 143.7 96 79.2
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 4.4e-32 142.1 110 70.0
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 2.8e-31 139.4 88 77.3
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 1.4e-30 137.1 96 72.9
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.4e-30 137.1 108 67.6
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 1.8e-30 136.7 113 62.8
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 4.1e-30 135.6 108 67.6
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.2e-29 134.0 96 72.9
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.2e-29 134.0 96 72.9
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 2.6e-29 132.9 96 71.9
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 3.4e-29 132.5 111 64.9
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 3.4e-29 132.5 111 64.9
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 4.5e-29 132.1 111 64.9
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 4.5e-29 132.1 111 64.9
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 7.7e-29 131.3 93 73.1
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.3e-28 130.6 96 71.9
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 1.7e-28 130.2 126 58.7
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 2.2e-28 129.8 114 62.3
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 2.9e-28 129.4 111 64.0
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 2.9e-28 129.4 103 66.0
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 2.9e-28 129.4 103 66.0
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 6.5e-28 128.3 93 69.9
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 8.5e-28 127.9 103 67.0
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 1.1e-27 127.5 71 84.5
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 3.2e-27 125.9 98 67.3
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 1.2e-26 124.0 87 70.1
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 1.2e-26 124.0 108 63.9
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 1.6e-26 123.6 88 69.3
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 3.6e-26 122.5 88 69.3
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 3.6e-26 122.5 88 69.3
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 6.1e-26 121.7 98 65.3
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 7.9e-26 121.3 93 67.7
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 7.9e-26 121.3 106 61.3
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 3.0e-25 119.4 100 64.0
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 3.0e-25 119.4 100 64.0
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 5.2e-25 118.6 90 66.7
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 5.2e-25 118.6 90 66.7
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 6.7e-25 118.2 84 72.6
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 6.7e-25 118.2 128 53.1
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 8.8e-25 117.9 79 73.4
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 1.5e-24 117.1 62 85.5
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 4.4e-24 115.5 119 52.9
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 9.7e-24 114.4 62 87.1
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 2.8e-23 112.8 56 94.6
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 3.7e-23 112.5 99 61.6
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 4.8e-23 112.1 98 62.2
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 4.8e-23 112.1 98 62.2
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.4e-22 110.5 71 78.9
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 7.0e-22 108.2 83 71.1
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 8.0e-18 94.7 93 61.3
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 2.3e-17 93.2 110 47.3
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 1.3e-15 87.4 99 55.6
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 3.7e-15 85.9 83 56.6
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 4.8e-15 85.5 67 67.2
Cre09.g401300 Chlamydomonas reinhardtii HOM05D003686 ORTHO05D004322 7.0e-14 81.6 41 82.9
Lj5g0025755 Lotus japonicus HOM05D003686 ORTHO05D009933 2.9e-12 76.3 66 62.1
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.2e-08 64.3 114 38.6
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.6e-08 63.2 64 54.7
PSO384G1563 Papaver somniferum HOM05D003686 ORTHO05D004322 1.3e-07 60.8 72 51.4
PSO384G1591 Papaver somniferum HOM05D000185 ORTHO05D000105 1.3e-07 60.8 72 51.4
PSO384G1681 Papaver somniferum HOM05D003686 ORTHO05D004322 1.3e-07 60.8 72 51.4
PRCOL_00005459 Prasinoderma coloniale HOM05D003686 ORTHO05D004322 1.7e-07 60.5 94 41.5
PSO384G1636 Papaver somniferum HOM05D000185 ORTHO05D000105 3.7e-07 59.3 73 53.4
QL07p015856 Quercus lobata HOM05D003686 ORTHO05D004322 2.4e-06 56.6 63 50.8
QL93p0358_0018 Quercus lobata HOM05D003686 ORTHO05D004322 4.1e-06 55.8 63 50.8


User provided reference genes

Program Settings