Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01492 Brassica carinata HOM05D002849 ORTHO05D027174 9.8e-68 260.0 131 100.0
Mapoly0148s0040 Marchantia polymorpha HOM05D002849 ORTHO05D007186 1.9e-10 69.7 44 72.7
BcaC08g47111 Brassica carinata HOM05D002849 ORTHO05D007186 4.2e-10 68.6 44 75.0
BcaC08g47284 Brassica carinata HOM05D002849 ORTHO05D007186 4.2e-10 68.6 44 75.0
BcaNung06602 Brassica carinata HOM05D002849 ORTHO05D007186 4.2e-10 68.6 44 75.0
A05p04470 Brassica napus HOM05D002849 ORTHO05D007186 4.2e-10 68.6 44 75.0
C04p05180 Brassica napus HOM05D002849 ORTHO05D007186 4.2e-10 68.6 44 75.0
C06p50120 Brassica napus HOM05D002849 ORTHO05D007186 4.2e-10 68.6 44 75.0
BolC4t22158H Brassica oleracea HOM05D002849 ORTHO05D007186 4.2e-10 68.6 44 75.0
BolC6t40052H Brassica oleracea HOM05D002849 ORTHO05D007186 4.2e-10 68.6 44 75.0
BraA05t19423Z Brassica rapa HOM05D002849 ORTHO05D007186 4.2e-10 68.6 44 75.0
CARHR069720 Cardamine hirsuta HOM05D002849 ORTHO05D007186 4.2e-10 68.6 44 75.0
Pp3c27_3320 Physcomitrium patens HOM05D002849 ORTHO05D007186 4.2e-10 68.6 44 72.7
Sp4g26340 Schrenkiella parvula HOM05D002849 ORTHO05D007186 4.2e-10 68.6 44 75.0
MBI08_g35553_MAGBIO Magnolia biondii HOM05D002849 ORTHO05D007186 5.5e-10 68.2 44 72.7
HPP92_024207 Vanilla planifolia HOM05D002849 ORTHO05D007186 5.5e-10 68.2 44 72.7
Aa31LG1G25890 Aethionema arabicum HOM05D002849 ORTHO05D007186 9.3e-10 67.4 44 72.7
ATR0661G072 Amborella trichopoda HOM05D002849 ORTHO05D007186 9.3e-10 67.4 44 72.7
AL4G43230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 9.3e-10 67.4 44 72.7
AT2G44270 Arabidopsis thaliana HOM05D002849 ORTHO05D007186 9.3e-10 67.4 44 72.7
A07p41740 Brassica napus HOM05D002849 ORTHO05D007186 9.3e-10 67.4 44 72.7
Carub.0002s2306 Capsella rubella HOM05D002849 ORTHO05D007186 9.3e-10 67.4 44 72.7
Carub.0004s2686 Capsella rubella HOM05D002849 ORTHO05D007186 9.3e-10 67.4 44 72.7
Cfa014032 Carpinus fangiana HOM05D002849 ORTHO05D007186 9.3e-10 67.4 44 70.5
Cfa017767 Carpinus fangiana HOM05D002849 ORTHO05D007186 9.3e-10 67.4 44 70.5
AUR62013834 Chenopodium quinoa HOM05D002849 ORTHO05D007186 9.3e-10 67.4 44 72.7
AUR62036771 Chenopodium quinoa HOM05D002849 ORTHO05D007186 9.3e-10 67.4 44 72.7
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 9.3e-10 67.4 44 70.5
Eucgr.F03540 Eucalyptus grandis HOM05D002849 ORTHO05D007186 9.3e-10 67.4 44 70.5
PSO541G1452 Papaver somniferum HOM05D002849 ORTHO05D007186 9.3e-10 67.4 44 72.7
PSO675G6932 Papaver somniferum HOM05D002849 ORTHO05D007186 9.3e-10 67.4 44 72.7
Sp5g31310 Schrenkiella parvula HOM05D002849 ORTHO05D007186 9.3e-10 67.4 43 76.7
Atru.chr13.175_Atru.chr13.176 Acer truncatum HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
Aqoxy6G01855 Aquilegia oxysepala HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
AL2G36230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
EL10Ac2g04301 Beta vulgaris HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
CiPaw.08G071100 Carya illinoinensis HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
ClCG08G013910 Citrullus lanatus HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
Cc10_g00890 Coffea canephora HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
COL.COLO4_21615 Corchorus olitorius HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
Dinv39573 Davidia involucrata HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
Duzib093G2127 Durio zibethinus HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
Gohir.A05G181300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
Gohir.D05G184300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
Gorai.009G189800 Gossypium raimondii HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
MD08G1004800 Malus domestica HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
Oeu046334.1 Olea europaea HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
Potri.005G083500 Populus trichocarpa HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
Prupe.1G356900 Prunus persica HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
QL02p013578 Quercus lobata HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
SpUn0523_0010 Schrenkiella parvula HOM05D002849 ORTHO05D007186 1.2e-09 67.0 42 78.6
Sed0011348 Sechium edule HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
Hund05132 Selenicereus undatus HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
Sc02g0008960 Simmondsia chinensis HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
SGA_v2.0_scaffold19G08599 Striga asiatica HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 72.7
Thecc.08G055100 Theobroma cacao HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
unitig_744.g24607 Utricularia gibba HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
GSVIVG01008705001 Vitis vinifera HOM05D002849 ORTHO05D007186 1.2e-09 67.0 44 70.5
Ah.01g004180 Amaranthus hybridus HOM05D002849 ORTHO05D007186 1.6e-09 66.6 44 70.5
Migut.N03194 Erythranthe guttata HOM05D002849 ORTHO05D007186 1.6e-09 66.6 44 70.5
Nn6g31840 Nelumbo nucifera HOM05D002849 ORTHO05D007186 1.6e-09 66.6 44 70.5
BcaB02g08806 Brassica carinata HOM05D002849 ORTHO05D007186 2.1e-09 66.2 44 72.7
BraA07t31703Z Brassica rapa HOM05D002849 ORTHO05D007186 2.1e-09 66.2 44 72.7
Thhalv10018770m.g Eutrema salsugineum HOM05D002849 ORTHO05D007186 2.1e-09 66.2 71 53.5
HanXRQChr17g0533361 Helianthus annuus HOM05D002849 ORTHO05D007186 2.1e-09 66.2 44 68.2
Hma1.2p1_1100F.1_g257100 Hydrangea macrophylla HOM05D002849 ORTHO05D007186 2.1e-09 66.2 44 68.2
Lsat_1_v5_gn_3_7661 Lactuca sativa HOM05D002849 ORTHO05D007186 2.1e-09 66.2 44 68.2
Solyc08g074590.2 Solanum lycopersicum HOM05D002849 ORTHO05D007186 2.1e-09 66.2 44 68.2
Sopen08g023190 Solanum pennellii HOM05D002849 ORTHO05D007186 2.1e-09 66.2 44 68.2
THA.LOC104811452 Tarenaya hassleriana HOM05D002849 ORTHO05D007186 2.1e-09 66.2 44 68.2
TWI56G0831 Tripterygium wilfordii HOM05D002849 ORTHO05D007186 2.1e-09 66.2 44 70.5
CSS0035799 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D007186 2.7e-09 65.9 44 68.2
CBR_g55299 Chara braunii HOM05D002849 ORTHO05D007186 2.7e-09 65.9 44 68.2
DCAR_016752 Daucus carota HOM05D002022 ORTHO05D002056 2.7e-09 65.9 44 68.2
FvH4_2g37771 Fragaria vesca HOM05D002849 ORTHO05D007186 2.7e-09 65.9 44 68.2
FAN20G1564 Fragaria x ananassa HOM05D002849 ORTHO05D007186 2.7e-09 65.9 44 68.2
FAN27G2060 Fragaria x ananassa HOM05D002849 ORTHO05D007186 2.7e-09 65.9 44 68.2
PGR083G0750 Punica granatum HOM05D002849 ORTHO05D007186 2.7e-09 65.9 44 68.2
Rhsim06G0009600 Rhododendron simsii HOM05D002849 ORTHO05D007186 2.7e-09 65.9 43 69.8
RcHm_v2.0_Chr6g0303961 Rosa chinensis HOM05D002849 ORTHO05D007186 2.7e-09 65.9 44 68.2
AagrBONN_evm.TU.Sc2ySwM_344.4630 Anthoceros agrestis HOM05D002849 ORTHO05D007186 3.5e-09 65.5 45 68.9
CARHR139450 Cardamine hirsuta HOM05D002849 ORTHO05D007186 3.5e-09 65.5 44 72.7
MELO3C011328.2 Cucumis melo HOM05D002849 ORTHO05D007186 3.5e-09 65.5 44 68.2
CsaV3_2G024550 Cucumis sativus L. HOM05D000201 ORTHO05D000490 3.5e-09 65.5 44 68.2
Zm00001eb255730 Zea mays HOM05D002849 ORTHO05D007186 3.5e-09 65.5 44 68.2
Manes.08G142100 Manihot esculenta HOM05D002849 ORTHO05D007186 4.6e-09 65.1 44 68.2
TAR376G0763 Trochodendron aralioides HOM05D002849 ORTHO05D007186 4.6e-09 65.1 44 68.2
vmacro21838 Vaccinium macrocarpon HOM05D002849 ORTHO05D007186 4.6e-09 65.1 44 65.9
Ciclev10001644m.g Citrus clementina HOM05D002849 ORTHO05D007186 6.1e-09 64.7 44 68.2
MD15G1004300 Malus domestica HOM05D002849 ORTHO05D007186 6.1e-09 64.7 43 69.8
SHI05854 Sapria himalayana HOM05D002849 ORTHO05D007186 6.1e-09 64.7 44 68.2
CANSAT11G2551 Cannabis sativa HOM05D002849 ORTHO05D007186 7.9e-09 64.3 44 65.9
Lj4A14T52 Lonicera japonica HOM05D002849 ORTHO05D007186 7.9e-09 64.3 44 65.9
PRCOL_00001104 Prasinoderma coloniale HOM05D002849 ORTHO05D007186 1.0e-08 63.9 44 63.6
Prupe.3G237200 Prunus persica HOM05D002849 ORTHO05D007186 1.0e-08 63.9 37 78.4
ECA246G5259 Erigeron canadensis HOM05D002849 ORTHO05D007186 1.3e-08 63.5 44 63.6
Nitab4.5_0001131g0060 Nicotiana tabacum HOM05D002849 ORTHO05D007186 1.3e-08 63.5 42 69.0
Peaxi162Scf00166g00641 Petunia axillaris HOM05D002849 ORTHO05D007186 1.3e-08 63.5 42 69.0
SMO118G0346 Selaginella moellendorffii HOM05D002849 ORTHO05D007186 1.3e-08 63.5 44 68.2
C04p16270 Brassica napus HOM05D039331 ORTHO05D027174 3.9e-08 62.0 47 72.3
Nitab4.5_0000907g0040 Nicotiana tabacum HOM05D002849 ORTHO05D007186 5.1e-08 61.6 43 65.1
Cfa027047 Carpinus fangiana HOM05D002849 ORTHO05D007186 6.7e-08 61.2 44 65.9
Cre16.g666100 Chlamydomonas reinhardtii HOM05D002849 ORTHO05D007186 6.7e-08 61.2 71 50.7
Ca_15284_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 6.7e-08 61.2 43 67.4
Ca_15420_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 6.7e-08 61.2 43 67.4
Os01g0598900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 6.7e-08 61.2 44 65.9
Glyma.04G002200 Glycine max HOM05D002849 ORTHO05D007186 8.7e-08 60.8 43 67.4
Medtr3g118250 Medicago truncatula HOM05D002849 ORTHO05D007186 1.5e-07 60.1 43 67.4
Os02g0762300 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 1.5e-07 60.1 71 50.7
TPR.G36468 Trifolium pratense HOM05D002849 ORTHO05D007186 1.5e-07 60.1 43 67.4
Phvul.009G117600 Phaseolus vulgaris HOM05D002849 ORTHO05D007186 1.9e-07 59.7 43 65.1
TAR628G0269 Trochodendron aralioides HOM05D002849 ORTHO05D007186 1.9e-07 59.7 32 81.2
VMungo1309G1771 Vigna mungo HOM05D002849 ORTHO05D007186 1.9e-07 59.7 43 65.1
arahy.Tifrunner.gnm1.ann1.D80FKX Arachis hypogaea HOM05D002849 ORTHO05D007186 3.3e-07 58.9 43 65.1
arahy.Tifrunner.gnm1.ann1.ID8SUW Arachis hypogaea HOM05D002849 ORTHO05D007186 3.3e-07 58.9 43 65.1
Lj1g0000302 Lotus japonicus HOM05D002849 ORTHO05D007186 3.3e-07 58.9 43 65.1
Lalb_Chr23g0264921 Lupinus albus HOM05D002849 ORTHO05D007186 7.4e-07 57.8 43 65.1
Haze_27194 Corylus avellana HOM05D002849 ORTHO05D007186 9.7e-07 57.4 43 65.1
Sp5g27500 Schrenkiella parvula HOM05D039331 ORTHO05D027174 2.2e-06 56.2 52 53.8
VMungo1309G1925 Vigna mungo HOM05D002849 ORTHO05D007186 2.2e-06 56.2 42 61.9
HPP92_024246 Vanilla planifolia HOM05D002849 ORTHO05D007186 3.7e-06 55.5 28 85.7
FAN08G3136 Fragaria x ananassa HOM05D002849 ORTHO05D007186 8.2e-06 54.3 45 60.0


User provided reference genes

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