Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.2823 Acer truncatum HOM05D006129 ORTHO05D007446 2.5e-245 851.7 433 100.0
Atru.chr5.2887 Acer truncatum HOM05D006129 ORTHO05D007446 1.6e-170 603.2 496 68.5
Atru.BG.82.p Acer truncatum HOM05D006129 ORTHO05D007446 2.1e-135 486.5 492 56.5
Atru.chr5.2826 Acer truncatum HOM05D006129 ORTHO05D007446 5.1e-129 465.3 265 88.7
Ciclev10027854m.g Citrus clementina HOM05D006129 ORTHO05D007446 9.0e-126 454.5 497 52.3
Thecc.02G095400 Theobroma cacao HOM05D006129 ORTHO05D007446 1.9e-120 436.8 494 50.0
CiPaw.05G055300 Carya illinoinensis HOM05D006129 ORTHO05D007446 5.6e-120 435.3 489 50.3
Duzib248G0151 Durio zibethinus HOM05D006129 ORTHO05D007446 6.2e-119 431.8 494 49.8
TWI31G0609 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 3.1e-118 429.5 496 49.0
COL.COLO4_11724 Corchorus olitorius HOM05D006129 ORTHO05D007446 6.9e-118 428.3 495 48.9
Aqoxy3G03484 Aquilegia oxysepala HOM05D006129 ORTHO05D007446 3.4e-117 426.0 497 48.5
CANSAT25G2181 Cannabis sativa HOM05D006129 ORTHO05D007446 4.5e-117 425.6 491 48.7
Cpa.g.sc62.53 Carica papaya HOM05D006129 ORTHO05D007446 1.3e-116 424.1 494 49.2
GSVIVG01031785001 Vitis vinifera HOM05D006129 ORTHO05D007446 6.5e-116 421.8 490 48.8
Sed0004701 Sechium edule HOM05D006129 ORTHO05D007446 8.4e-116 421.4 493 48.1
MD10G1089000 Malus domestica HOM05D006129 ORTHO05D007446 1.1e-115 421.0 494 50.8
QL11p038411 Quercus lobata HOM05D006129 ORTHO05D007446 4.2e-115 419.1 491 48.9
Dinv42121 Davidia involucrata HOM05D006129 ORTHO05D007446 7.1e-115 418.3 492 48.6
Cfa005424 Carpinus fangiana HOM05D006129 ORTHO05D007446 1.2e-114 417.5 489 48.3
Lalb_Chr10g0095451 Lupinus albus HOM05D006129 ORTHO05D007446 1.2e-114 417.5 490 48.0
Nn4g23272 Nelumbo nucifera HOM05D006129 ORTHO05D007446 6.0e-114 415.2 492 47.2
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 7.9e-114 414.8 495 47.7
RcHm_v2.0_Chr6g0259211 Rosa chinensis HOM05D006129 ORTHO05D007446 7.9e-114 414.8 494 48.0
TWI79G0519 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 1.3e-113 414.1 496 47.8
Potri.009G106800 Populus trichocarpa HOM05D006129 ORTHO05D007446 1.8e-113 413.7 492 48.2
Haze_01881 Corylus avellana HOM05D006129 ORTHO05D007446 5.1e-113 412.1 491 47.5
TAR371G0476 Trochodendron aralioides HOM05D006129 ORTHO05D007446 5.1e-113 412.1 490 48.4
Sabra09G0081600 Salix brachista HOM05D006129 ORTHO05D007446 8.7e-113 411.4 489 48.7
MELO3C026699.2 Cucumis melo HOM05D006129 ORTHO05D007446 1.3e-111 407.5 495 46.5
FvH4_2g06900 Fragaria vesca HOM05D006129 ORTHO05D007446 1.3e-111 407.5 493 47.5
Lj5P206T15 Lonicera japonica HOM05D006129 ORTHO05D007446 2.1e-111 406.8 494 47.4
Lj2g0010354 Lotus japonicus HOM05D006129 ORTHO05D007446 8.2e-111 404.8 473 47.8
Manes.17G094600 Manihot esculenta HOM05D006129 ORTHO05D007446 1.1e-110 404.4 491 48.9
VMungo0464G0688 Vigna mungo HOM05D006129 ORTHO05D007446 1.4e-110 404.1 493 46.0
CSS0025307 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 1.8e-110 403.7 490 48.2
CSS0048591 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 1.8e-110 403.7 490 48.2
FAN24G2628 Fragaria x ananassa HOM05D006129 ORTHO05D007446 1.8e-110 403.7 489 47.6
FAN27G0179 Fragaria x ananassa HOM05D006129 ORTHO05D007446 4.0e-110 402.5 493 47.1
FAN15G2181 Fragaria x ananassa HOM05D006129 ORTHO05D007446 5.3e-110 402.1 493 46.9
Glyma.07G178800 Glycine max HOM05D006129 ORTHO05D007446 5.3e-110 402.1 493 45.8
Phvul.002G308800 Phaseolus vulgaris HOM05D006129 ORTHO05D007446 9.0e-110 401.4 493 46.0
PGR042G1055 Punica granatum HOM05D006129 ORTHO05D007446 1.5e-109 400.6 470 47.4
vmacro02172 Vaccinium macrocarpon HOM05D006129 ORTHO05D007446 1.5e-109 400.6 485 48.2
CsaV3_3G028800 Cucumis sativus L. HOM05D006129 ORTHO05D007446 2.0e-109 400.2 495 45.3
Glyma.20G009700 Glycine max HOM05D006129 ORTHO05D007446 4.5e-109 399.1 472 46.8
Gohir.A01G005900 Gossypium hirsutum HOM05D006129 ORTHO05D007446 1.0e-108 397.9 494 47.2
Gohir.D01G006000 Gossypium hirsutum HOM05D006129 ORTHO05D007446 1.0e-108 397.9 494 47.2
Gorai.002G007000 Gossypium raimondii HOM05D006129 ORTHO05D007446 1.3e-108 397.5 494 47.0
Sp3g29130 Schrenkiella parvula HOM05D006129 ORTHO05D007446 6.5e-108 395.2 476 46.2
THA.LOC104807348 Tarenaya hassleriana HOM05D006129 ORTHO05D007446 1.9e-107 393.7 499 45.5
Ca_13480_v3 Cicer arietinum L. HOM05D006129 ORTHO05D007446 5.5e-107 392.1 494 44.9
CARHR106180 Cardamine hirsuta HOM05D006129 ORTHO05D007446 2.1e-106 390.2 476 45.6
Dinv23594 Davidia involucrata HOM05D006129 ORTHO05D007446 1.3e-105 387.5 440 49.8
Rhsim11G0169300 Rhododendron simsii HOM05D006129 ORTHO05D007446 1.3e-105 387.5 487 46.8
Thhalv10022548m.g Eutrema salsugineum HOM05D006129 ORTHO05D007446 3.0e-105 386.3 487 45.2
DCAR_003623 Daucus carota HOM05D006129 ORTHO05D007446 3.9e-105 386.0 484 47.3
Prupe.8G116000 Prunus persica HOM05D006129 ORTHO05D007446 6.7e-105 385.2 461 48.8
Medtr1g026035 Medicago truncatula HOM05D006129 ORTHO05D007446 2.5e-104 383.3 491 44.2
Carub.0003s2972 Capsella rubella HOM05D006129 ORTHO05D007446 5.7e-104 382.1 475 45.1
AL3G47590 Arabidopsis lyrata HOM05D006129 ORTHO05D007446 1.6e-103 380.6 476 45.0
A07p04960 Brassica napus HOM05D006129 ORTHO05D007446 2.8e-103 379.8 476 45.2
BraA07t28289Z Brassica rapa HOM05D006129 ORTHO05D007446 2.8e-103 379.8 474 45.4
BcaC06g36090 Brassica carinata HOM05D006129 ORTHO05D007446 3.7e-103 379.4 473 45.5
C07p07940 Brassica napus HOM05D006129 ORTHO05D007446 3.7e-103 379.4 473 45.5
BolC7t41212H Brassica oleracea HOM05D006129 ORTHO05D007446 3.7e-103 379.4 473 45.5
Aa31LG8G13380 Aethionema arabicum HOM05D006129 ORTHO05D007446 8.2e-103 378.3 476 44.5
MSTRG.20134 Avicennia marina HOM05D006129 ORTHO05D007446 1.4e-102 377.5 491 45.2
Nitab4.5_0007303g0010 Nicotiana tabacum HOM05D006129 ORTHO05D007446 1.8e-102 377.1 492 45.1
Oeu057674.1 Olea europaea HOM05D006129 ORTHO05D007446 2.4e-102 376.7 484 45.0
arahy.Tifrunner.gnm1.ann1.769PPM Arachis hypogaea HOM05D006129 ORTHO05D007446 1.2e-101 374.4 473 44.8
BcaB03g16332 Brassica carinata HOM05D006129 ORTHO05D007446 2.0e-101 373.6 469 45.6
Lsat_1_v5_gn_5_113460 Lactuca sativa HOM05D006129 ORTHO05D007446 2.6e-101 373.2 501 43.7
AT2G15820 Arabidopsis thaliana HOM05D006129 ORTHO05D007446 4.5e-101 372.5 476 44.3
Sc08g0000140 Simmondsia chinensis HOM05D006129 ORTHO05D007446 1.3e-100 370.9 499 44.7
Migut.B00306 Erythranthe guttata HOM05D006129 ORTHO05D007446 1.7e-100 370.5 440 46.1
TPR.G26422 Trifolium pratense HOM05D006129 ORTHO05D007446 1.7e-100 370.5 473 44.6
Eucgr.L00820 Eucalyptus grandis HOM05D006129 ORTHO05D007446 5.0e-100 369.0 482 45.4
CAN.G644.34 Capsicum annuum HOM05D006129 ORTHO05D007446 2.5e-99 366.7 475 45.1
Eucgr.L01320 Eucalyptus grandis HOM05D006129 ORTHO05D007446 9.4e-99 364.8 493 44.8
HanXRQChr10g0303221 Helianthus annuus HOM05D006129 ORTHO05D007446 2.7e-98 363.2 488 43.9
unitig_744.g24241 Utricularia gibba HOM05D006129 ORTHO05D007446 4.6e-98 362.5 495 43.0
Solyc11g066850.3 Solanum lycopersicum HOM05D006129 ORTHO05D007446 1.4e-97 360.9 491 43.8
Nitab4.5_0001453g0090 Nicotiana tabacum HOM05D006129 ORTHO05D007446 6.7e-97 358.6 518 42.7
EL10Ac9g21818 Beta vulgaris HOM05D006129 ORTHO05D007446 8.8e-97 358.2 483 42.9
ECA234G4125 Erigeron canadensis HOM05D006129 ORTHO05D007446 4.3e-96 355.9 498 41.4
Peaxi162Scf00789g00530 Petunia axillaris HOM05D006129 ORTHO05D007446 7.4e-96 355.1 492 43.1
AUR62016636 Chenopodium quinoa HOM05D006129 ORTHO05D007446 1.8e-94 350.5 473 43.1
AUR62011424 Chenopodium quinoa HOM05D006129 ORTHO05D007446 4.1e-94 349.4 472 43.0
SGA_v2.0_scaffold58G20604 Striga asiatica HOM05D006129 ORTHO05D007446 4.1e-94 349.4 492 41.1
CDE04G1903 Ceratophyllum demersum HOM05D006129 ORTHO05D007446 1.7e-92 344.0 429 45.5
Os02g0702000 Oryza sativa ssp. japonica HOM05D006129 ORTHO05D007446 2.9e-92 343.2 493 41.2
Atru.chr5.2881 Acer truncatum HOM05D006129 ORTHO05D007446 3.8e-92 342.8 263 66.9
Ah.01g006750 Amaranthus hybridus HOM05D006129 ORTHO05D007446 8.5e-92 341.7 483 40.0
HPP92_022045 Vanilla planifolia HOM05D006129 ORTHO05D007446 1.4e-91 340.9 493 40.2
Zm00001eb251880 Zea mays HOM05D006129 ORTHO05D007446 1.4e-89 334.3 494 40.7
PGSC0003DMG400026525 Solanum tuberosum HOM05D006129 ORTHO05D007446 2.0e-88 330.5 441 43.8
ATR0665G475 Amborella trichopoda HOM05D006129 ORTHO05D007446 2.2e-87 327.0 477 41.7
Sopen11g026560 Solanum pennellii HOM05D006129 ORTHO05D007446 2.8e-87 326.6 441 43.5
Medtr0381s0010 Medicago truncatula HOM05D006129 ORTHO05D007446 8.5e-84 315.1 369 46.3
Hund00318 Selenicereus undatus HOM05D006129 ORTHO05D007446 5.5e-83 312.4 357 47.9
FAN20G2787 Fragaria x ananassa HOM05D006129 ORTHO05D007446 8.0e-82 308.5 403 45.2
Actinidia12976 Actinidia chinensis HOM05D006129 ORTHO05D007446 1.3e-79 301.2 490 39.6
Atru.chr5.2882 Acer truncatum HOM05D006129 ORTHO05D007446 6.3e-79 298.9 180 90.0
SEGI_31419 Sequoiadendron giganteum HOM05D006129 ORTHO05D007446 4.5e-77 292.7 474 37.8
Psat6g001360 Pisum sativum HOM05D006129 ORTHO05D007446 2.5e-75 287.0 254 57.1
TAR371G0058 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.5e-64 251.1 256 53.5
TAR629G1168 Trochodendron aralioides HOM05D006129 ORTHO05D007446 4.4e-64 249.6 328 44.2
TAR371G0992 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.9e-59 234.2 428 38.1
QL11p038542 Quercus lobata HOM05D006129 ORTHO05D007446 1.5e-56 224.6 300 45.3
Eucgr.G01504 Eucalyptus grandis HOM05D006129 ORTHO05D007446 1.2e-50 204.9 438 33.1
Pp3c25_10050 Physcomitrium patens HOM05D006129 ORTHO05D007446 2.6e-32 144.1 355 28.5
Mapoly0036s0055 Marchantia polymorpha HOM05D006129 ORTHO05D007446 7.6e-32 142.5 300 30.3
TAR629G1760 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.7e-31 141.4 141 54.6
AagrBONN_evm.TU.Sc2ySwM_344.5085 Anthoceros agrestis HOM05D006129 ORTHO05D007446 4.1e-30 136.7 222 34.2
Cc02_g18440 Coffea canephora HOM05D006129 ORTHO05D007446 1.7e-28 131.3 203 37.9
Pp3c16_23700 Physcomitrium patens HOM05D006129 ORTHO05D007446 9.6e-27 125.6 230 35.2
SMO356G0628 Selaginella moellendorffii HOM05D006129 ORTHO05D007446 6.2e-26 122.9 233 28.8
Cc02_g18430 Coffea canephora HOM05D006129 ORTHO05D007446 4.4e-24 116.7 107 55.1
Atru.chr5.2820 Acer truncatum HOM05D006129 ORTHO05D007446 4.9e-23 113.2 87 67.8
arahy.Tifrunner.gnm1.ann1.SUMB0F Arachis hypogaea HOM05D006129 ORTHO05D007446 1.4e-22 111.7 93 57.0
AagrBONN_evm.TU.Sc2ySwM_344.1734 Anthoceros agrestis HOM05D006129 ORTHO05D007446 1.5e-19 101.7 347 25.1
QL11p038477 Quercus lobata HOM05D006129 ORTHO05D007446 4.8e-10 70.1 87 46.0
Aa31sc52G230 Aethionema arabicum HOM05D006596 ORTHO05D008497 4.2e-06 57.0 171 25.1
RcHm_v2.0_Chr6g0302241 Rosa chinensis HOM05D006129 ORTHO05D007446 4.2e-06 57.0 72 44.4


User provided reference genes

Program Settings