Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.5e-124 449.5 231 100.0
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.1e-58 230.7 359 42.9
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.2e-55 220.7 360 41.9
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 2.1e-44 183.3 255 47.5
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 6.9e-40 168.3 298 40.3
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 6.9e-40 168.3 350 37.1
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 8.4e-38 161.4 351 35.6
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 1.9e-37 160.2 352 34.1
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 1.2e-36 157.5 361 33.5
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 7.6e-31 138.3 352 33.2
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 7.6e-31 138.3 347 33.4
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 1.7e-30 137.1 361 31.9
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 6.4e-30 135.2 359 32.9
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 2.4e-29 133.3 358 33.5
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 4.2e-29 132.5 349 31.5
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 4.2e-29 132.5 329 34.0
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 9.3e-29 131.3 348 31.9
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 2.7e-28 129.8 362 32.3
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 3.5e-28 129.4 349 31.8
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 3.5e-28 129.4 353 31.2
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 2.3e-27 126.7 363 32.0
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 3.9e-27 125.9 342 31.0
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 3.9e-27 125.9 343 32.1
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 6.7e-27 125.2 368 31.8
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 8.7e-27 124.8 355 31.3
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 2.5e-26 123.2 347 30.3
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 3.3e-26 122.9 355 32.4
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 5.6e-26 122.1 347 31.4
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 1.3e-25 120.9 335 30.1
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 1.3e-25 120.9 323 31.6
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 1.6e-25 120.6 349 30.4
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 3.7e-25 119.4 345 30.4
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 1.4e-24 117.5 362 30.7
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.4e-24 117.5 347 29.4
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 6.9e-24 115.2 337 30.9
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 9.0e-24 114.8 356 29.5
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 9.0e-24 114.8 347 29.4
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 1.5e-23 114.0 346 29.8
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 1.5e-23 114.0 337 31.2
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 2.0e-23 113.6 341 28.4
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 2.0e-23 113.6 340 31.5
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 2.0e-23 113.6 346 30.9
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 9.9e-23 111.3 379 28.8
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 1.3e-22 110.9 324 30.2
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 1.3e-22 110.9 241 37.3
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 1.7e-22 110.5 339 29.2
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 2.9e-22 109.8 348 30.7
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 2.9e-22 109.8 339 31.0
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 3.8e-22 109.4 340 28.8
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 4.9e-22 109.0 338 31.1
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 1.9e-21 107.1 342 28.4
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 2.5e-21 106.7 322 28.3
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 9.3e-21 104.8 343 29.7
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 2.7e-20 103.2 348 29.6
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 3.5e-20 102.8 336 28.9
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 3.5e-20 102.8 343 30.0
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 1.0e-19 101.3 339 26.8
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 1.8e-19 100.5 347 28.8
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 1.8e-19 100.5 322 28.6
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 1.8e-19 100.5 355 29.9
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 2.3e-19 100.1 339 29.8
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 2.3e-19 100.1 343 28.0
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 3.0e-19 99.8 361 28.3
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 3.0e-19 99.8 339 29.8
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 3.0e-19 99.8 336 27.1
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 3.9e-19 99.4 324 28.1
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 5.1e-19 99.0 337 28.5
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 6.7e-19 98.6 336 29.5
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 8.7e-19 98.2 323 28.5
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 8.7e-19 98.2 323 28.5
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 1.1e-18 97.8 336 29.2
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 1.1e-18 97.8 340 26.8
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 1.1e-18 97.8 340 27.4
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 1.1e-18 97.8 338 27.5
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 1.5e-18 97.4 343 27.4
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 3.3e-18 96.3 318 27.7
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 3.3e-18 96.3 340 29.1
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 4.3e-18 95.9 323 28.2
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 4.3e-18 95.9 94 59.6
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 5.6e-18 95.5 357 28.0
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 5.6e-18 95.5 96 57.3
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 5.6e-18 95.5 332 28.6
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 2.1e-17 93.6 97 57.7
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 2.8e-17 93.2 336 27.4
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 3.7e-17 92.8 343 28.3
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 3.7e-17 92.8 337 30.9
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 4.8e-17 92.4 95 57.9
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 1.1e-16 91.3 336 27.1
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 1.1e-16 91.3 336 25.6
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 1.1e-16 91.3 97 54.6
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 1.8e-16 90.5 95 55.8
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 1.8e-16 90.5 339 26.0
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 2.4e-16 90.1 96 57.3
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 1.2e-15 87.8 95 55.8
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 1.2e-15 87.8 95 53.7
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 2.6e-15 86.7 96 52.1
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 4.5e-15 85.9 319 27.3
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 4.5e-15 85.9 336 25.6
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 5.8e-15 85.5 220 33.6
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 2.9e-14 83.2 362 25.7
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 2.5e-13 80.1 136 41.9
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 2.5e-13 80.1 154 38.3
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 5.5e-13 79.0 95 52.6
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 3.5e-12 76.3 320 25.9
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 1.0e-11 74.7 338 25.7
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 2.3e-11 73.6 95 44.2
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 3.0e-11 73.2 149 36.9
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 1.1e-10 71.2 90 46.7
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 4.3e-10 69.3 95 44.2
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 3.7e-09 66.2 95 48.4
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.5e-07 60.8 90 41.1
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.0e-06 58.2 90 37.8


User provided reference genes

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