Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01855 Aquilegia oxysepala HOM05D002849 ORTHO05D007186 7.0e-209 730.3 356 100.0
Prupe.1G356900 Prunus persica HOM05D002849 ORTHO05D007186 2.8e-189 665.2 356 89.6
Nn6g31840 Nelumbo nucifera HOM05D002849 ORTHO05D007186 2.6e-187 658.7 356 88.5
FvH4_2g37771 Fragaria vesca HOM05D002849 ORTHO05D007186 4.4e-187 657.9 357 88.2
CiPaw.08G071100 Carya illinoinensis HOM05D002849 ORTHO05D007186 6.3e-186 654.1 355 88.5
Duzib093G2127 Durio zibethinus HOM05D002849 ORTHO05D007186 1.1e-185 653.3 355 89.0
Potri.005G083500 Populus trichocarpa HOM05D002849 ORTHO05D007186 1.4e-185 652.9 349 89.4
Atru.chr13.175_Atru.chr13.176 Acer truncatum HOM05D002849 ORTHO05D007186 4.1e-185 651.4 361 88.1
Thecc.08G055100 Theobroma cacao HOM05D002849 ORTHO05D007186 5.4e-185 651.0 355 88.5
Dinv39573 Davidia involucrata HOM05D002849 ORTHO05D007186 1.2e-184 649.8 359 88.0
Gohir.D05G184300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 1.2e-184 649.8 355 88.7
Gorai.009G189800 Gossypium raimondii HOM05D002849 ORTHO05D007186 1.2e-184 649.8 355 88.7
TWI56G0831 Tripterygium wilfordii HOM05D002849 ORTHO05D007186 1.6e-184 649.4 357 86.8
Gohir.A05G181300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 2.7e-184 648.7 355 88.5
Ciclev10001644m.g Citrus clementina HOM05D002849 ORTHO05D007186 3.5e-184 648.3 357 87.4
Manes.08G142100 Manihot esculenta HOM05D002849 ORTHO05D007186 3.5e-184 648.3 356 87.9
THA.LOC104811452 Tarenaya hassleriana HOM05D002849 ORTHO05D007186 1.0e-183 646.7 357 86.6
TAR376G0763 Trochodendron aralioides HOM05D002849 ORTHO05D007186 1.3e-183 646.4 358 88.0
PGR083G0750 Punica granatum HOM05D002849 ORTHO05D007186 5.0e-183 644.4 359 86.9
AL2G36230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 1.5e-182 642.9 357 87.1
Carub.0004s2686 Capsella rubella HOM05D002849 ORTHO05D007186 2.5e-182 642.1 355 87.3
CSS0035799 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D007186 3.3e-182 641.7 348 88.8
Carub.0002s2306 Capsella rubella HOM05D002849 ORTHO05D007186 7.3e-182 640.6 358 86.3
Thhalv10018770m.g Eutrema salsugineum HOM05D002849 ORTHO05D007186 7.3e-182 640.6 358 86.9
PSO541G1452 Papaver somniferum HOM05D002849 ORTHO05D007186 7.3e-182 640.6 355 85.9
CARHR069720 Cardamine hirsuta HOM05D002849 ORTHO05D007186 9.5e-182 640.2 359 86.6
Cc10_g00890 Coffea canephora HOM05D002849 ORTHO05D007186 9.5e-182 640.2 357 86.6
GSVIVG01008705001 Vitis vinifera HOM05D002849 ORTHO05D007186 1.6e-181 639.4 371 84.4
PSO675G6932 Papaver somniferum HOM05D002849 ORTHO05D007186 2.1e-181 639.0 357 85.7
Sp4g26340 Schrenkiella parvula HOM05D002849 ORTHO05D007186 2.1e-181 639.0 357 85.2
Hund05132 Selenicereus undatus HOM05D002849 ORTHO05D007186 2.1e-181 639.0 352 86.9
AT2G44270 Arabidopsis thaliana HOM05D002849 ORTHO05D007186 3.6e-181 638.3 355 87.0
CANSAT11G2551 Cannabis sativa HOM05D002849 ORTHO05D007186 3.6e-181 638.3 353 87.0
AL4G43230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 6.1e-181 637.5 355 87.0
MELO3C011328.2 Cucumis melo HOM05D002849 ORTHO05D007186 6.1e-181 637.5 361 85.6
Migut.N03194 Erythranthe guttata HOM05D002849 ORTHO05D007186 8.0e-181 637.1 349 87.1
MD08G1004800 Malus domestica HOM05D002849 ORTHO05D007186 1.4e-180 636.3 353 87.3
Eucgr.F03540 Eucalyptus grandis HOM05D002849 ORTHO05D007186 1.2e-179 633.3 350 87.7
Sc02g0008960 Simmondsia chinensis HOM05D002849 ORTHO05D007186 1.5e-179 632.9 352 85.8
ClCG08G013910 Citrullus lanatus HOM05D002849 ORTHO05D007186 2.2e-178 629.0 363 85.7
Sed0011348 Sechium edule HOM05D002849 ORTHO05D007186 4.9e-178 627.9 360 85.6
Aa31LG1G25890 Aethionema arabicum HOM05D002849 ORTHO05D007186 3.2e-177 625.2 357 84.9
A05p04470 Brassica napus HOM05D002849 ORTHO05D007186 9.2e-177 623.6 372 82.0
BraA05t19423Z Brassica rapa HOM05D002849 ORTHO05D007186 1.3e-175 619.8 382 79.8
FAN20G1564 Fragaria x ananassa HOM05D002849 ORTHO05D007186 8.6e-175 617.1 357 83.8
Glyma.04G002200 Glycine max HOM05D002849 ORTHO05D007186 8.6e-175 617.1 356 83.4
FAN27G2060 Fragaria x ananassa HOM05D002849 ORTHO05D007186 1.9e-174 615.9 357 84.0
Rhsim06G0009600 Rhododendron simsii HOM05D002849 ORTHO05D007186 3.3e-174 615.1 398 77.4
ECA246G5259 Erigeron canadensis HOM05D002849 ORTHO05D007186 5.6e-174 614.4 322 91.3
Lsat_1_v5_gn_3_7661 Lactuca sativa HOM05D002849 ORTHO05D007186 5.6e-174 614.4 348 85.9
Cfa017767 Carpinus fangiana HOM05D002849 ORTHO05D007186 7.3e-174 614.0 331 89.7
QL02p013578 Quercus lobata HOM05D002849 ORTHO05D007186 7.3e-174 614.0 381 80.3
vmacro21838 Vaccinium macrocarpon HOM05D002849 ORTHO05D007186 1.1e-172 610.1 405 75.3
Medtr3g118250 Medicago truncatula HOM05D002849 ORTHO05D007186 1.8e-172 609.4 343 84.8
C04p05180 Brassica napus HOM05D002849 ORTHO05D007186 2.3e-172 609.0 365 80.8
Lj1g0000302 Lotus japonicus HOM05D002849 ORTHO05D007186 5.2e-172 607.8 352 82.4
HPP92_024207 Vanilla planifolia HOM05D002849 ORTHO05D007186 1.2e-171 606.7 359 82.7
BolC4t22158H Brassica oleracea HOM05D002849 ORTHO05D007186 2.6e-171 605.5 394 76.6
MBI08_g35553_MAGBIO Magnolia biondii HOM05D002849 ORTHO05D007186 5.8e-171 604.4 364 82.4
Ca_15284_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 1.3e-170 603.2 352 83.0
Ca_15420_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 1.3e-170 603.2 352 83.0
BraA07t31703Z Brassica rapa HOM05D002849 ORTHO05D007186 2.2e-170 602.4 378 79.1
Os02g0762300 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 1.1e-169 600.1 352 83.0
Phvul.009G117600 Phaseolus vulgaris HOM05D002849 ORTHO05D007186 3.2e-169 598.6 359 79.7
Zm00001eb255730 Zea mays HOM05D002849 ORTHO05D007186 3.2e-169 598.6 361 81.2
Oeu046334.1 Olea europaea HOM05D002849 ORTHO05D007186 1.0e-167 593.6 335 86.0
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 3.9e-167 591.7 371 79.8
BcaNung06602 Brassica carinata HOM05D002849 ORTHO05D007186 5.1e-167 591.3 360 80.8
BcaB02g08806 Brassica carinata HOM05D002849 ORTHO05D007186 1.9e-166 589.3 360 80.0
Hma1.2p1_1100F.1_g257100 Hydrangea macrophylla HOM05D002849 ORTHO05D007186 2.1e-165 585.9 356 81.2
Nitab4.5_0001131g0060 Nicotiana tabacum HOM05D002849 ORTHO05D007186 6.2e-165 584.3 366 79.5
arahy.Tifrunner.gnm1.ann1.ID8SUW Arachis hypogaea HOM05D002849 ORTHO05D007186 8.1e-165 583.9 350 80.3
CsaV3_2G024550 Cucumis sativus L. HOM05D000201 ORTHO05D000490 4.0e-164 581.6 369 78.3
A07p41740 Brassica napus HOM05D002849 ORTHO05D007186 4.6e-160 568.2 312 86.9
unitig_744.g24607 Utricularia gibba HOM05D002849 ORTHO05D007186 6.0e-160 567.8 343 81.3
Lj4A14T52 Lonicera japonica HOM05D002849 ORTHO05D007186 1.3e-159 566.6 397 72.8
C06p50120 Brassica napus HOM05D002849 ORTHO05D007186 1.7e-159 566.2 356 78.7
SGA_v2.0_scaffold19G08599 Striga asiatica HOM05D002849 ORTHO05D007186 3.3e-158 562.0 436 67.2
Os01g0598900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 3.6e-157 558.5 327 82.6
BcaC08g47111 Brassica carinata HOM05D002849 ORTHO05D007186 1.4e-156 556.6 370 75.7
DCAR_016752 Daucus carota HOM05D002022 ORTHO05D002056 2.0e-155 552.7 319 84.6
SMO118G0346 Selaginella moellendorffii HOM05D002849 ORTHO05D007186 1.3e-154 550.1 335 76.4
Mapoly0148s0040 Marchantia polymorpha HOM05D002849 ORTHO05D007186 2.9e-154 548.9 318 80.2
Cfa014032 Carpinus fangiana HOM05D002849 ORTHO05D007186 1.1e-153 547.0 330 81.8
Pp3c27_3320 Physcomitrium patens HOM05D002849 ORTHO05D007186 3.2e-153 545.4 335 76.4
Sp5g31310 Schrenkiella parvula HOM05D002849 ORTHO05D007186 1.6e-152 543.1 359 77.2
COL.COLO4_21615 Corchorus olitorius HOM05D002849 ORTHO05D007186 1.3e-146 523.5 351 76.4
Lalb_Chr23g0264921 Lupinus albus HOM05D002849 ORTHO05D007186 1.3e-146 523.5 376 72.3
VMungo1309G1771 Vigna mungo HOM05D002849 ORTHO05D007186 1.9e-145 519.6 360 71.9
EL10Ac2g04301 Beta vulgaris HOM05D002849 ORTHO05D007186 7.1e-145 517.7 357 74.2
MD15G1004300 Malus domestica HOM05D002849 ORTHO05D007186 9.3e-145 517.3 366 72.4
arahy.Tifrunner.gnm1.ann1.D80FKX Arachis hypogaea HOM05D002849 ORTHO05D007186 8.7e-143 510.8 354 71.8
BolC6t40052H Brassica oleracea HOM05D002849 ORTHO05D007186 5.6e-142 508.1 360 72.2
CBR_g55299 Chara braunii HOM05D002849 ORTHO05D007186 3.6e-141 505.4 316 74.1
BcaC08g47284 Brassica carinata HOM05D002849 ORTHO05D007186 4.5e-139 498.4 361 71.2
Cre16.g666100 Chlamydomonas reinhardtii HOM05D002849 ORTHO05D007186 4.5e-139 498.4 318 73.3
TPR.G36468 Trifolium pratense HOM05D002849 ORTHO05D007186 1.9e-129 466.5 293 77.5
AagrBONN_evm.TU.Sc2ySwM_344.4630 Anthoceros agrestis HOM05D002849 ORTHO05D007186 9.3e-129 464.2 263 84.4
AUR62013834 Chenopodium quinoa HOM05D002849 ORTHO05D007186 3.7e-125 452.2 352 66.5
SHI05854 Sapria himalayana HOM05D002849 ORTHO05D007186 2.6e-123 446.0 327 68.2
Haze_27194 Corylus avellana HOM05D002849 ORTHO05D007186 1.1e-121 440.7 324 63.0
AT1G76170 Arabidopsis thaliana HOM05D002849 ORTHO05D007186 1.9e-121 439.9 238 87.4
RcHm_v2.0_Chr6g0303961 Rosa chinensis HOM05D002849 ORTHO05D007186 7.4e-118 427.9 225 90.2
PRCOL_00001104 Prasinoderma coloniale HOM05D002849 ORTHO05D007186 9.7e-118 427.6 345 60.9
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 1.4e-116 423.7 349 64.2
HanXRQChr17g0533361 Helianthus annuus HOM05D002849 ORTHO05D007186 2.4e-116 422.9 222 91.4
Solyc08g074590.2 Solanum lycopersicum HOM05D002849 ORTHO05D007186 1.5e-115 420.2 226 88.1
Sopen08g023190 Solanum pennellii HOM05D002849 ORTHO05D007186 1.5e-115 420.2 226 88.1
HPP92_024246 Vanilla planifolia HOM05D002849 ORTHO05D007186 1.3e-114 417.2 239 84.9
AUR62036771 Chenopodium quinoa HOM05D002849 ORTHO05D007186 9.4e-113 411.0 321 67.0
Nitab4.5_0000907g0040 Nicotiana tabacum HOM05D002849 ORTHO05D007186 2.7e-112 409.5 351 63.2
ATR0661G072 Amborella trichopoda HOM05D002849 ORTHO05D007186 1.8e-111 406.8 230 84.3
CARHR139450 Cardamine hirsuta HOM05D002849 ORTHO05D007186 4.3e-110 402.1 213 89.2
Peaxi162Scf00166g00641 Petunia axillaris HOM05D002849 ORTHO05D007186 1.4e-108 397.1 229 84.3
TAR628G0269 Trochodendron aralioides HOM05D002849 ORTHO05D007186 1.7e-106 390.2 231 84.8
Cfa027047 Carpinus fangiana HOM05D002849 ORTHO05D007186 9.7e-102 374.4 443 47.0
Ah.01g004180 Amaranthus hybridus HOM05D002849 ORTHO05D007186 1.5e-81 307.4 234 67.1
Psat5g001160 Pisum sativum HOM05D002849 ORTHO05D007186 3.0e-71 273.1 216 66.7
Lj9A176T24 Lonicera japonica HOM05D002849 ORTHO05D007186 5.2e-63 245.7 210 61.9
Peaxi162Scf00445g00105 Petunia axillaris HOM05D002849 ORTHO05D007186 6.4e-61 238.8 357 42.6
VMungo1309G1925 Vigna mungo HOM05D002849 ORTHO05D007186 2.3e-58 230.3 269 50.9
CARHR139440 Cardamine hirsuta HOM05D002849 ORTHO05D007186 1.9e-57 227.3 129 85.3
Peaxi162Scf00166g00633 Petunia axillaris HOM05D002849 ORTHO05D007186 6.6e-50 202.2 114 84.2
HanXRQChr17g0533371 Helianthus annuus HOM05D002849 ORTHO05D007186 1.6e-48 197.6 116 79.3
ATR0661G077 Amborella trichopoda HOM05D002849 ORTHO05D007186 2.2e-45 187.2 122 74.6
RcHm_v2.0_Chr6g0303951 Rosa chinensis HOM05D002849 ORTHO05D007186 2.2e-37 160.6 94 78.7
Prupe.3G237200 Prunus persica HOM05D002849 ORTHO05D007186 4.9e-37 159.5 83 89.2
SalBow6G3808 Salvia bowleyana HOM05D002849 ORTHO05D007186 6.4e-37 159.1 101 76.2
SpUn0523_0010 Schrenkiella parvula HOM05D002849 ORTHO05D007186 2.3e-34 150.6 121 67.8
FAN08G3136 Fragaria x ananassa HOM05D002849 ORTHO05D007186 8.4e-29 132.1 77 87.0
MELO3C004787.2 Cucumis melo HOM05D002849 ORTHO05D007186 2.3e-26 124.0 95 66.3
MELO3C012882.2 Cucumis melo HOM05D002849 ORTHO05D007186 1.8e-23 114.4 77 71.4
Gorai.007G371200 Gossypium raimondii HOM05D002849 ORTHO05D047384 4.9e-21 106.3 70 70.0
Gohir.D11G341150 Gossypium hirsutum HOM05D002849 ORTHO05D047384 7.1e-20 102.4 75 66.7
MELO3C034170.2 Cucumis melo HOM05D002849 ORTHO05D007186 6.7e-18 95.9 57 75.4
MELO3C003855.2 Cucumis melo HOM05D002849 ORTHO05D007186 2.8e-16 90.5 60 71.7
BolC5t33314H Brassica oleracea HOM05D002849 ORTHO05D024297 1.3e-13 81.6 77 57.1
TAR276G0001 Trochodendron aralioides HOM05D002849 ORTHO05D051491 5.5e-12 76.3 54 70.4
C05p45940 Brassica napus HOM05D002849 ORTHO05D024297 2.7e-11 73.9 93 49.5
Actinidia17029 Actinidia chinensis HOM05D000148 ORTHO05D000081 1.9e-09 67.8 31 93.5
AL7G13010 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 1.9e-09 67.8 34 79.4
BcaB01g01492 Brassica carinata HOM05D002849 ORTHO05D027174 9.6e-09 65.5 44 70.5
A05p30360 Brassica napus HOM05D002849 ORTHO05D024297 2.8e-08 63.9 38 78.9
BraA05t21874Z Brassica rapa HOM05D002849 ORTHO05D024297 2.8e-08 63.9 38 78.9


User provided reference genes

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