Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 1.3e-120 436.4 217 100.0
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 6.0e-70 268.1 227 67.4
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 3.6e-67 258.8 235 63.8
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.8e-66 256.5 238 62.2
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 3.0e-61 239.2 202 66.8
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 1.1e-60 237.3 202 66.3
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 1.1e-60 237.3 198 67.7
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 1.5e-60 236.9 201 65.7
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 4.3e-60 235.3 198 66.2
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 1.6e-59 233.4 198 65.7
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.6e-59 233.4 197 66.5
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.6e-59 233.4 200 66.5
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 8.1e-59 231.1 215 60.5
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 1.1e-58 230.7 202 63.9
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 1.1e-58 230.7 214 61.7
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.4e-58 230.3 202 64.4
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 3.1e-58 229.2 205 63.9
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 8.9e-58 227.6 200 60.5
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 8.9e-58 227.6 201 64.2
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 1.5e-57 226.9 205 63.9
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 4.4e-57 225.3 200 64.0
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 9.9e-57 224.2 218 61.0
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 2.2e-56 223.0 207 62.8
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 4.9e-56 221.9 213 59.6
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 6.4e-56 221.5 198 63.1
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 6.4e-56 221.5 198 63.1
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 1.2e-54 217.2 195 65.1
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 1.6e-54 216.9 204 60.8
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 1.6e-54 216.9 218 58.3
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.7e-54 216.1 201 62.2
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 1.3e-53 213.8 202 60.4
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 1.7e-53 213.4 198 61.6
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 5.1e-53 211.8 229 57.6
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 5.1e-53 211.8 193 63.7
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 1.9e-52 209.9 208 58.7
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 2.5e-52 209.5 204 59.8
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 9.6e-52 207.6 202 60.4
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 1.3e-51 207.2 197 61.9
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 2.8e-51 206.1 204 60.8
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 2.8e-51 206.1 209 59.3
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 8.1e-51 204.5 198 60.1
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 1.1e-50 204.1 203 59.6
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.4e-50 203.8 196 60.2
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.4e-50 203.0 195 58.5
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 1.2e-49 200.7 224 51.8
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 1.2e-49 200.7 215 52.1
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 1.2e-49 200.7 201 60.7
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 2.0e-49 199.9 211 58.3
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 2.6e-49 199.5 206 56.8
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 3.4e-49 199.1 202 57.4
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 9.9e-49 197.6 206 56.8
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 9.9e-49 197.6 205 56.1
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 1.7e-48 196.8 196 60.2
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 1.7e-48 196.8 196 60.2
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 1.7e-48 196.8 197 59.4
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 4.9e-48 195.3 180 65.0
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 1.4e-47 193.7 192 58.3
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 4.2e-47 192.2 209 56.5
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 9.3e-47 191.0 203 55.2
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 9.3e-47 191.0 203 53.7
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 1.2e-46 190.7 209 56.0
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 1.6e-46 190.3 189 60.3
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 1.6e-46 190.3 174 60.9
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 7.9e-46 188.0 191 58.6
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 7.9e-46 188.0 216 53.2
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 1.0e-45 187.6 196 58.2
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 3.0e-45 186.0 205 54.6
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 3.0e-45 186.0 206 54.4
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 5.1e-45 185.3 197 57.9
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 2.5e-44 183.0 233 51.5
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 7.4e-44 181.4 203 55.2
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 7.4e-44 181.4 215 52.1
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 9.6e-44 181.0 181 59.7
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 1.6e-43 180.3 140 66.4
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 2.1e-43 179.9 213 55.4
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 6.2e-43 178.3 197 56.3
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 8.1e-43 177.9 121 73.6
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 1.8e-42 176.8 205 52.7
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 4.0e-42 175.6 182 59.9
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 5.3e-42 175.3 187 56.1
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 9.9e-41 171.0 185 55.1
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 9.9e-41 171.0 201 52.2
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 1.7e-40 170.2 198 56.6
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 2.9e-40 169.5 201 52.2
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.8e-40 169.1 154 61.7
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.8e-40 169.1 154 61.7
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 4.9e-40 168.7 201 52.7
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 6.4e-40 168.3 223 49.8
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 6.4e-40 168.3 221 52.0
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 6.4e-40 168.3 119 72.3
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 8.4e-40 167.9 205 52.2
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 8.4e-40 167.9 196 55.1
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 1.9e-39 166.8 143 65.7
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 3.2e-39 166.0 122 70.5
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 3.2e-39 166.0 122 70.5
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 3.2e-39 166.0 177 57.1
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 3.2e-39 166.0 204 51.5
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 3.2e-39 166.0 193 56.5
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 5.5e-39 165.2 146 63.0
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 7.1e-39 164.9 181 56.9
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 9.3e-39 164.5 216 49.1
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 9.3e-39 164.5 201 50.7
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 1.2e-38 164.1 119 70.6
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.6e-38 163.7 201 52.2
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 2.1e-38 163.3 199 53.3
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 2.1e-38 163.3 118 72.9
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 2.1e-38 163.3 118 72.9
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 3.5e-38 162.5 126 66.7
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 4.6e-38 162.2 190 54.2
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 1.3e-37 160.6 176 55.1
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 5.1e-37 158.7 210 50.5
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 5.1e-37 158.7 185 54.6
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 6.7e-37 158.3 114 73.7
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 8.7e-37 157.9 233 46.8
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 1.1e-36 157.5 111 71.2
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.9e-36 156.8 192 53.1
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 2.5e-36 156.4 111 70.3
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 2.5e-36 156.4 144 63.2
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 3.3e-36 156.0 206 51.5
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 3.3e-36 156.0 196 51.5
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 4.3e-36 155.6 118 67.8
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 4.3e-36 155.6 185 54.1
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 5.6e-36 155.2 222 48.2
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 1.3e-35 154.1 159 54.1
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 1.3e-35 154.1 108 70.4
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.6e-35 153.7 225 47.1
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.6e-35 153.7 225 47.1
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.6e-35 153.7 194 54.1
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 2.1e-35 153.3 248 44.0
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 3.7e-35 152.5 204 52.0
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 1.1e-34 151.0 204 51.0
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 1.1e-34 151.0 194 51.0
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 1.1e-34 151.0 234 46.6
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 1.8e-34 150.2 203 48.8
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 1.8e-34 150.2 203 48.8
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 2.4e-34 149.8 214 49.5
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 5.3e-34 148.7 228 46.5
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 1.5e-33 147.1 170 52.9
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 7.6e-33 144.8 147 58.5
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 1.7e-32 143.7 246 45.1
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 1.7e-32 143.7 204 45.6
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 4.9e-32 142.1 207 48.3
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 6.5e-32 141.7 192 46.4
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 1.4e-31 140.6 164 51.8
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 1.9e-31 140.2 120 64.2
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 7.1e-31 138.3 129 62.0
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.2e-30 137.5 129 62.0
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 2.1e-30 136.7 116 63.8
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 6.0e-30 135.2 119 63.0
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 6.0e-30 135.2 119 63.0
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 7.9e-30 134.8 199 46.7
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.8e-29 133.7 103 68.9
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.8e-29 133.7 103 68.9
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 5.1e-29 132.1 205 45.9
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 1.5e-28 130.6 102 67.6
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 4.3e-28 129.0 168 50.0
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 4.3e-28 129.0 147 54.4
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 4.3e-28 129.0 251 40.2
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 1.6e-27 127.1 172 48.3
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 8.2e-27 124.8 91 70.3
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 3.1e-26 122.9 145 53.8
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 5.3e-26 122.1 117 58.1
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 5.3e-26 122.1 117 58.1
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 6.9e-26 121.7 92 70.7
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 1.2e-25 120.9 172 49.4
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 3.8e-24 115.9 62 85.5
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 3.8e-24 115.9 142 50.7
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 6.5e-24 115.2 189 47.1
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 2.5e-23 113.2 62 87.1
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 4.6e-22 109.0 96 61.5
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 6.1e-22 108.6 56 89.3
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.3e-19 100.9 173 45.1
QL07p015856 Quercus lobata HOM05D003686 ORTHO05D004322 2.2e-19 100.1 201 39.8
QL93p0358_0018 Quercus lobata HOM05D003686 ORTHO05D004322 1.1e-18 97.8 201 39.3
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 1.8e-18 97.1 83 65.1
PSO384G1591 Papaver somniferum HOM05D000185 ORTHO05D000105 1.2e-14 84.3 190 39.5
Cre09.g401300 Chlamydomonas reinhardtii HOM05D003686 ORTHO05D004322 2.7e-14 83.2 41 85.4
PSO384G1636 Papaver somniferum HOM05D000185 ORTHO05D000105 4.6e-14 82.4 190 38.9
PSO384G1681 Papaver somniferum HOM05D003686 ORTHO05D004322 1.4e-10 70.9 81 55.6
Lj5g0025755 Lotus japonicus HOM05D003686 ORTHO05D009933 1.8e-10 70.5 66 57.6
PSO384G1563 Papaver somniferum HOM05D003686 ORTHO05D004322 1.5e-09 67.4 126 41.3
PRCOL_00005459 Prasinoderma coloniale HOM05D003686 ORTHO05D004322 2.9e-08 63.2 41 68.3
CSS0028767 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 2.7e-06 56.6 97 46.4
CSS0035418 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 2.7e-06 56.6 97 46.4
Lj5g0006065 Lotus japonicus HOM05D003686 ORTHO05D004322 4.7e-06 55.8 88 42.0


User provided reference genes

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