Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 3.7e-266 921.0 472 100.0
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 2.6e-251 871.7 473 96.0
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 3.3e-182 642.1 454 74.4
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 4.9e-178 628.2 459 71.0
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 1.5e-174 616.7 459 70.2
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.4e-172 610.1 462 71.6
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 3.3e-166 589.0 468 67.5
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 1.1e-164 583.9 449 70.8
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 2.0e-163 579.7 456 67.5
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 2.6e-163 579.3 459 69.5
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 3.8e-162 575.5 444 70.3
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 6.5e-162 574.7 457 68.9
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 1.1e-161 573.9 454 69.2
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 2.0e-158 563.1 452 67.0
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 9.7e-158 560.8 463 65.4
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 2.4e-156 556.2 466 65.7
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 2.0e-155 553.1 444 68.5
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 3.4e-155 552.4 453 66.9
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 3.4e-155 552.4 463 66.3
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 1.7e-154 550.1 446 67.0
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 1.7e-154 550.1 464 66.2
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 2.9e-154 549.3 475 64.0
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 3.2e-153 545.8 490 63.5
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 2.7e-152 542.7 476 63.9
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 2.7e-152 542.7 446 67.0
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 4.7e-152 542.0 466 64.2
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 1.8e-151 540.0 455 64.4
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 3.0e-151 539.3 469 64.2
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 3.9e-151 538.9 463 64.4
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 8.8e-151 537.7 445 67.2
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 1.1e-150 537.3 466 63.9
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 2.0e-150 536.6 449 64.6
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 4.4e-150 535.4 469 63.3
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 9.7e-150 534.3 459 64.1
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 2.2e-149 533.1 443 64.8
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 1.8e-148 530.0 467 62.7
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 1.6e-147 526.9 450 62.2
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 1.6e-147 526.9 452 64.4
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 1.3e-146 523.9 449 63.9
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 1.9e-145 520.0 467 62.3
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 2.5e-145 519.6 455 62.0
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 3.2e-145 519.2 453 63.1
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 4.2e-145 518.8 464 62.3
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 5.5e-145 518.5 464 61.4
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 9.4e-145 517.7 449 63.3
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 8.0e-144 514.6 473 61.5
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 1.8e-143 513.5 457 60.6
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 6.7e-143 511.5 440 63.9
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 6.7e-143 511.5 466 62.4
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 4.4e-142 508.8 451 62.1
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 3.7e-141 505.8 460 62.0
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 8.2e-141 504.6 452 60.8
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 1.1e-140 504.2 472 59.5
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 1.4e-140 503.8 453 61.4
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 3.1e-140 502.7 463 61.3
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 7.0e-140 501.5 448 60.9
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 1.6e-139 500.4 473 59.4
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 1.7e-138 496.9 433 62.6
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 2.9e-138 496.1 446 59.4
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 1.5e-137 493.8 442 58.4
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 4.2e-137 492.3 467 58.2
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 5.5e-137 491.9 462 60.8
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 9.4e-137 491.1 453 61.6
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 2.1e-136 490.0 450 58.0
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 3.0e-135 486.1 449 60.6
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 1.5e-134 483.8 459 60.1
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 2.6e-134 483.0 444 56.8
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 5.7e-134 481.9 444 56.5
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 1.3e-133 480.7 448 58.3
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 6.3e-133 478.4 463 56.4
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 4.1e-132 475.7 446 59.9
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 7.0e-132 474.9 442 56.3
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 2.0e-131 473.4 446 55.8
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 1.3e-130 470.7 464 58.8
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 5.0e-130 468.8 460 55.0
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 5.0e-130 468.8 514 52.9
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 4.2e-129 465.7 442 55.9
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 2.8e-128 463.0 449 58.8
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 4.7e-128 462.2 461 55.3
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 1.8e-127 460.3 433 59.6
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 1.2e-126 457.6 616 49.2
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 5.4e-124 448.7 449 59.7
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 9.2e-124 448.0 393 63.9
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 2.0e-123 446.8 468 52.8
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 1.0e-122 444.5 483 52.0
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 2.8e-120 436.4 350 70.6
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 6.1e-120 435.3 392 61.2
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 9.8e-118 427.9 459 55.6
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 1.3e-117 427.6 451 54.5
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 9.2e-116 421.4 333 66.7
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 1.2e-110 404.4 327 69.1
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 1.4e-108 397.5 325 65.8
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 1.2e-102 377.9 355 61.4
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 2.0e-102 377.1 414 53.1
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 1.1e-100 371.3 308 66.6
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 4.1e-100 369.4 405 56.5
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 1.2e-94 351.3 320 63.4
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 1.3e-90 337.8 406 48.0
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 2.1e-88 330.5 268 69.0
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 6.9e-87 325.5 400 49.8
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 2.2e-85 320.5 332 52.7
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 1.2e-83 314.7 265 67.2
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 3.2e-76 290.0 280 55.7
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 5.8e-62 242.7 378 44.4
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 3.5e-59 233.4 285 49.5
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 1.3e-58 231.5 606 32.2
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 2.3e-58 230.7 344 45.9
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 6.7e-58 229.2 359 42.9
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 1.4e-52 211.5 183 59.6
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 2.5e-44 184.1 257 44.0
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 9.7e-41 172.2 187 59.4
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 6.3e-40 169.5 103 81.6
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.4e-39 168.3 153 60.1
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 1.8e-39 167.9 181 58.6
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 1.0e-37 162.2 102 77.5
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 1.3e-37 161.8 183 57.9
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 1.4e-36 158.3 93 78.5
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 2.8e-24 117.5 174 48.3
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 3.7e-24 117.1 100 62.0
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 1.4e-23 115.2 105 60.0
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 2.3e-18 97.8 112 49.1
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 1.3e-16 92.0 54 75.9
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 3.7e-16 90.5 127 47.2
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 8.3e-16 89.4 119 42.9
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 8.3e-16 89.4 49 81.6
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 1.4e-15 88.6 51 80.4
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 1.4e-15 88.6 51 80.4
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 6.1e-11 73.2 81 44.4
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 4.0e-10 70.5 52 63.5
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 5.2e-10 70.1 73 50.7
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 1.2e-09 68.9 50 62.0
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 9.8e-09 65.9 41 73.2
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 1.3e-08 65.5 56 51.8
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 6.3e-08 63.2 33 87.9
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 1.4e-07 62.0 83 44.6
Ah.14g086750 Amaranthus hybridus HOM05D005431 ORTHO05D006762 1.8e-07 61.6 52 53.8
RcHm_v2.0_Chr5g0076741 Rosa chinensis HOM05D005431 ORTHO05D006762 1.6e-06 58.5 41 73.2
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 7.8e-06 56.2 63 52.4


User provided reference genes

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