Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 4.4e-258 894.4 556 100.0
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 8.4e-193 677.6 564 77.5
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 4.8e-188 661.8 565 72.7
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 3.4e-186 655.6 565 76.5
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 1.9e-176 623.2 564 78.0
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 1.8e-174 616.7 564 76.1
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 3.9e-174 615.5 565 73.5
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 3.3e-173 612.5 565 73.8
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 4.9e-169 598.6 580 71.6
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 4.6e-167 592.0 582 70.8
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 4.6e-167 592.0 582 70.8
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 8.7e-166 587.8 580 70.7
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 3.3e-165 585.9 582 69.4
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 5.7e-165 585.1 568 67.8
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 1.4e-163 580.5 565 67.3
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 5.9e-162 575.1 566 68.6
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 3.6e-159 565.8 569 66.1
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 1.8e-158 563.5 585 64.6
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 2.5e-157 559.7 562 63.2
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 9.7e-157 557.8 566 64.3
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 1.3e-156 557.4 565 63.7
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 1.6e-156 557.0 563 67.1
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 4.8e-156 555.4 564 62.6
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 6.3e-156 555.1 562 64.2
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 6.3e-156 555.1 567 64.7
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 1.1e-155 554.3 583 63.1
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 1.5e-154 550.4 564 62.6
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 1.5e-154 550.4 564 62.8
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.3e-153 547.4 565 64.1
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 7.2e-152 541.6 560 68.6
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 9.4e-152 541.2 565 66.5
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 2.1e-151 540.0 566 64.5
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 2.7e-151 539.7 559 60.6
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 1.4e-150 537.3 563 61.1
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 1.8e-150 537.0 563 60.0
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.3e-150 536.6 551 63.5
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 3.0e-150 536.2 564 65.2
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 3.9e-150 535.8 559 65.5
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 3.9e-150 535.8 576 62.7
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 6.7e-150 535.0 565 63.5
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 2.0e-149 533.5 552 71.0
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 2.6e-149 533.1 564 66.0
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 2.6e-149 533.1 569 63.1
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 3.3e-149 532.7 571 66.0
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 5.7e-149 531.9 568 66.5
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 7.4e-149 531.6 555 65.2
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 9.7e-149 531.2 571 65.8
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.7e-148 530.4 583 59.0
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 8.2e-148 528.1 563 62.3
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 8.2e-148 528.1 606 60.9
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 8.2e-148 528.1 606 60.9
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 1.1e-147 527.7 569 59.1
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 1.4e-147 527.3 563 62.3
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 1.8e-147 526.9 568 62.7
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 9.1e-147 524.6 567 62.3
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 4.5e-146 522.3 571 65.1
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 3.8e-145 519.2 547 65.6
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 5.0e-145 518.8 560 63.6
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 8.5e-145 518.1 597 61.8
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 8.5e-145 518.1 568 62.1
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.4e-144 517.3 564 65.6
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 2.5e-144 516.5 564 63.1
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 4.2e-144 515.8 567 59.1
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 2.7e-143 513.1 574 62.7
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 3.6e-143 512.7 576 63.7
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.1e-141 507.7 551 63.2
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 8.2e-140 501.5 565 63.0
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 1.1e-139 501.1 567 61.0
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 1.4e-139 500.7 568 62.5
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 1.4e-139 500.7 567 60.5
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 1.4e-139 500.7 569 63.8
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 7.7e-138 495.0 563 63.8
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 1.0e-137 494.6 582 61.7
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 1.0e-137 494.6 560 63.0
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 2.2e-137 493.4 588 57.8
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 6.5e-137 491.9 558 63.8
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 3.2e-136 489.6 587 58.6
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 1.0e-134 484.6 556 65.5
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 1.0e-134 484.6 556 65.5
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 2.3e-134 483.4 562 63.2
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 8.8e-134 481.5 526 60.5
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 1.1e-131 474.6 526 59.9
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 3.1e-131 473.0 557 53.1
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.3e-129 467.6 572 60.7
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 2.2e-129 466.8 375 71.5
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 5.0e-129 465.7 543 61.0
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 8.5e-129 464.9 505 63.4
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 8.5e-129 464.9 529 62.4
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 9.4e-128 461.5 579 57.5
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 2.7e-127 459.9 564 61.0
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 3.0e-126 456.4 554 57.0
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 4.0e-126 456.1 602 51.8
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 4.0e-126 456.1 564 63.5
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 1.5e-125 454.1 556 61.7
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 7.5e-125 451.8 601 55.2
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 6.3e-124 448.7 561 56.0
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 1.8e-123 447.2 598 52.7
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 3.1e-123 446.4 595 52.6
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 4.1e-123 446.0 570 55.8
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 5.4e-123 445.7 515 56.1
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.2e-122 444.5 596 51.5
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 4.5e-122 442.6 544 59.2
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 1.3e-121 441.0 562 55.3
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 1.1e-120 438.0 566 49.8
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 2.8e-119 433.3 575 49.2
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 2.3e-118 430.3 551 50.3
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 8.8e-118 428.3 582 49.7
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 3.4e-117 426.4 859 43.3
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 1.3e-113 414.5 595 52.6
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 8.0e-111 405.2 572 53.3
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.2e-108 397.1 558 50.9
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 1.8e-107 394.0 578 54.8
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 2.7e-106 390.2 488 61.7
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 8.6e-105 385.2 520 58.8
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 1.9e-104 384.0 506 55.5
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 7.5e-101 372.1 612 46.4
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 1.3e-100 371.3 488 59.4
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 6.4e-100 369.0 575 54.1
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 2.4e-99 367.1 568 51.2
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 1.5e-96 357.8 564 49.5
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 2.0e-93 347.4 576 49.1
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 2.6e-93 347.1 564 42.0
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.1e-91 341.7 342 57.9
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 4.1e-91 339.7 440 61.1
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 2.7e-90 337.0 579 46.1
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 2.3e-89 334.0 542 56.8
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 2.4e-86 323.9 563 41.2
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 2.9e-84 317.0 482 55.2
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.9e-84 317.0 568 42.6
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 1.4e-83 314.7 570 42.1
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 3.2e-83 313.5 575 41.7
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 4.1e-83 313.2 575 42.4
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 9.2e-83 312.0 568 42.3
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 2.7e-82 310.5 570 40.5
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 4.3e-80 303.1 570 40.0
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 5.6e-80 302.8 371 65.8
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 2.4e-75 287.3 370 52.4
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 4.3e-72 276.6 213 65.7
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 5.3e-70 269.6 445 45.4
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 3.8e-68 263.5 358 64.0
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 5.1e-65 253.1 371 61.2
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 2.0e-61 241.1 324 52.5
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 4.8e-55 219.9 328 44.8
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 3.9e-49 200.3 389 53.5
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 9.7e-48 195.7 238 56.3
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.6e-45 187.6 533 34.9
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 2.7e-42 177.6 175 79.4
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 1.4e-41 175.3 367 44.4
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 2.2e-39 167.9 166 71.1
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.0e-29 134.8 98 63.3
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-27 129.0 257 37.4
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 6.7e-25 119.8 88 84.1
AagrBONN_evm.TU.Sc2ySwM_228.3786 Anthoceros agrestis HOM05D003850 ORTHO05D004515 8.5e-20 102.8 140 43.6
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 2.5e-19 101.3 215 54.0
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 4.2e-19 100.5 57 82.5
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.4e-17 95.5 330 27.9
Aa31LG9G10030 Aethionema arabicum HOM05D003850 ORTHO05D004515 1.2e-16 92.4 54 92.6
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 1.3e-15 89.0 217 38.7
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 1.7e-15 88.6 307 33.2
Eucgr.A01650 Eucalyptus grandis HOM05D002251 ORTHO05D004515 1.4e-14 85.5 53 66.0
VMungo0720G0179 Vigna mungo HOM05D003850 ORTHO05D004515 5.3e-14 83.6 49 75.5
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis HOM05D003850 ORTHO05D004515 7.0e-14 83.2 245 41.6
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 2.0e-13 81.6 102 53.9
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.7e-13 81.3 90 54.4
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 3.5e-13 80.9 73 61.6
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 3.5e-13 80.9 73 61.6
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 5.0e-12 77.0 171 39.2
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 8.5e-12 76.3 105 50.5
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 8.5e-12 76.3 92 50.0
Nitab4.5_0006771g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 3.2e-11 74.3 79 58.2
CARHR253550 Cardamine hirsuta HOM05D003850 ORTHO05D004515 1.6e-10 72.0 64 59.4
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 4.0e-09 67.4 207 32.9
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 6.8e-09 66.6 70 50.0
SEGI_19210 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 4.4e-08 63.9 130 29.2
arahy.Tifrunner.gnm1.ann1.GFC3N0 Arachis hypogaea HOM05D003850 ORTHO05D004515 9.8e-08 62.8 57 57.9
PSO339G0182 Papaver somniferum HOM05D009217 ORTHO05D009626 1.8e-06 58.5 91 38.5
FAN21G0780 Fragaria x ananassa HOM05D003850 ORTHO05D004515 4.1e-06 57.4 214 34.6


User provided reference genes

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