Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 2.5e-184 648.7 334 100.0
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 5.1e-169 597.8 392 81.1
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 1.3e-127 460.3 393 62.3
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.1e-118 430.6 408 59.3
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 1.4e-115 420.2 328 68.9
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 1.4e-115 420.2 357 65.3
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 3.6e-114 415.6 406 56.7
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 1.0e-113 414.1 409 56.5
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 1.0e-113 414.1 408 57.6
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 2.3e-113 412.9 410 57.8
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.5e-112 410.2 409 57.9
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 2.6e-112 409.5 403 57.3
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 3.3e-112 409.1 409 57.5
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 9.7e-112 407.5 409 57.2
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 2.8e-111 406.0 413 56.4
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 4.8e-111 405.2 410 57.8
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 1.4e-110 403.7 412 55.8
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 1.8e-110 403.3 404 57.2
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 3.1e-110 402.5 382 57.3
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 4.1e-110 402.1 404 56.2
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 2.0e-109 399.8 408 56.4
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 4.5e-109 398.7 407 56.0
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 4.5e-109 398.7 405 55.6
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 1.0e-108 397.5 400 56.0
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 1.3e-108 397.1 399 55.4
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 1.3e-108 397.1 409 56.2
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 1.3e-108 397.1 403 57.1
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 2.2e-108 396.4 406 55.9
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 2.9e-108 396.0 400 56.0
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 8.5e-108 394.4 402 56.0
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 1.5e-107 393.7 394 55.8
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 7.2e-107 391.3 400 55.5
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 1.2e-106 390.6 398 53.8
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 3.6e-106 389.0 397 54.2
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 6.1e-106 388.3 393 55.0
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 8.0e-106 387.9 397 52.4
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 1.0e-105 387.5 414 53.9
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 8.8e-105 384.4 415 54.0
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 8.8e-105 384.4 406 54.9
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 2.0e-104 383.3 397 54.2
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 3.3e-104 382.5 406 53.7
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 2.2e-103 379.8 400 53.0
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 4.8e-103 378.6 414 54.3
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 4.8e-103 378.6 414 53.1
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 1.1e-102 377.5 414 52.9
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 1.4e-102 377.1 398 53.3
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 1.4e-102 377.1 392 54.6
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 2.4e-102 376.3 393 55.0
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 4.1e-102 375.6 381 53.8
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 5.3e-102 375.2 382 53.4
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 1.2e-101 374.0 439 50.6
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 2.0e-101 373.2 400 53.2
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 2.7e-101 372.9 401 53.6
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 1.3e-100 370.5 395 51.6
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 1.3e-100 370.5 395 54.4
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 2.9e-100 369.4 395 51.9
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 2.9e-100 369.4 398 53.3
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 3.8e-100 369.0 389 52.2
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 8.5e-100 367.9 396 54.0
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 1.1e-99 367.5 382 52.9
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 2.5e-99 366.3 405 51.6
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 4.2e-99 365.5 398 49.7
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 7.2e-99 364.8 381 52.2
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 2.1e-98 363.2 398 49.7
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 2.1e-98 363.2 398 49.5
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 3.6e-98 362.5 382 53.1
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 8.0e-98 361.3 396 52.8
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 3.0e-97 359.4 382 51.8
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 3.0e-97 359.4 399 50.4
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 4.0e-97 359.0 382 55.0
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 4.0e-97 359.0 407 51.6
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 2.6e-96 356.3 381 51.7
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 3.4e-96 355.9 387 53.7
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 7.5e-96 354.8 397 51.4
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 6.3e-95 351.7 390 50.5
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 1.2e-93 347.4 403 50.6
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 1.6e-93 347.1 414 48.8
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 3.5e-93 345.9 396 51.5
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 1.1e-91 340.9 394 50.8
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 1.5e-91 340.5 400 51.8
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 2.1e-90 336.7 345 55.7
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 1.0e-89 334.3 313 57.5
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 1.5e-88 330.5 417 49.6
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 1.2e-85 320.9 369 48.2
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 1.3e-84 317.4 441 45.1
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 2.3e-84 316.6 345 53.3
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 3.0e-81 306.2 543 39.2
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 7.5e-80 301.6 405 46.2
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 7.5e-80 301.6 211 72.5
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 7.0e-78 295.0 381 47.0
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 3.9e-76 289.3 397 44.6
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 6.6e-76 288.5 336 49.4
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 1.2e-74 284.3 382 45.5
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 2.3e-73 280.0 336 48.8
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 2.6e-72 276.6 333 49.2
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 5.8e-72 275.4 375 44.8
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 8.1e-66 255.0 261 51.7
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.4e-62 244.2 320 41.6
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 9.2e-62 241.5 397 39.0
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 3.2e-54 216.5 302 45.4
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 3.0e-52 209.9 292 43.8
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 4.3e-51 206.1 316 43.0
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 1.6e-50 204.1 271 47.6
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 6.0e-45 185.7 215 50.2
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 4.3e-43 179.5 98 88.8
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 4.5e-40 169.5 102 83.3
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 1.3e-39 167.9 199 50.3
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 1.4e-38 164.5 97 79.4
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 7.1e-38 162.2 187 46.0
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 3.3e-35 153.3 314 36.0
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 4.3e-35 152.9 325 36.6
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 5.8e-32 142.5 126 57.1
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.6e-26 124.4 100 65.0
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 2.2e-23 114.0 107 59.8
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.4e-22 111.3 109 57.8
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 3.5e-21 106.7 103 55.3
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 2.3e-20 104.0 103 60.2
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 2.1e-18 97.4 121 50.4
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 6.3e-18 95.9 110 49.1
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 4.1e-17 93.2 54 79.6
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 5.3e-17 92.8 104 50.0
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 5.9e-16 89.4 131 41.2
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 2.2e-15 87.4 45 86.7
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 1.2e-13 81.6 101 51.5
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 3.6e-13 80.1 49 77.6
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 3.6e-13 80.1 49 77.6
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 2.3e-12 77.4 220 33.6
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 2.3e-12 77.4 52 71.2
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 7.4e-11 72.4 81 46.9
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 1.3e-10 71.6 56 58.9
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 1.1e-09 68.6 50 64.0
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 6.9e-09 65.9 41 80.5
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 1.0e-07 62.0 112 41.1
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 1.3e-07 61.6 71 46.5
RcHm_v2.0_Chr5g0076741 Rosa chinensis HOM05D005431 ORTHO05D006762 3.8e-07 60.1 50 62.0
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 1.4e-06 58.2 29 89.7


User provided reference genes

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