Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015399 Chenopodium quinoa HOM05D004358 ORTHO05D004960 4.5e-200 701.0 351 100.0
EL10Ac3g05922 Beta vulgaris HOM05D004358 ORTHO05D004960 2.7e-144 515.8 382 73.0
AUR62002292 Chenopodium quinoa HOM05D004358 ORTHO05D004960 6.3e-138 494.6 297 85.2
Ah.13g072910 Amaranthus hybridus HOM05D004358 ORTHO05D004960 4.4e-131 471.9 368 67.7
Hund03152 Selenicereus undatus HOM05D004358 ORTHO05D004960 5.2e-124 448.4 382 61.5
GSVIVG01010748001 Vitis vinifera HOM05D004358 ORTHO05D004960 1.9e-110 403.3 380 57.1
MD04G1007400 Malus domestica HOM05D004358 ORTHO05D004960 9.6e-110 401.0 339 61.9
Sc13g0005360 Simmondsia chinensis HOM05D004358 ORTHO05D004960 1.4e-108 397.1 379 57.5
Duzib151G0384 Durio zibethinus HOM05D004358 ORTHO05D004960 2.6e-107 392.9 363 59.2
Thhalv10016815m.g Eutrema salsugineum HOM05D004358 ORTHO05D004960 1.7e-106 390.2 336 60.1
TWI59G0142 Tripterygium wilfordii HOM05D004358 ORTHO05D004960 2.9e-106 389.4 361 59.3
Sp4g13930 Schrenkiella parvula HOM05D004358 ORTHO05D004960 4.9e-106 388.7 341 59.5
Actinidia39855 Actinidia chinensis HOM05D004358 ORTHO05D004960 8.4e-106 387.9 362 57.7
Prupe.1G191600 Prunus persica HOM05D004358 ORTHO05D004960 1.1e-105 387.5 356 59.0
Nitab4.5_0005570g0020 Nicotiana tabacum HOM05D004358 ORTHO05D004960 4.2e-105 385.6 380 57.4
RcHm_v2.0_Chr4g0407021 Rosa chinensis HOM05D004358 ORTHO05D004960 1.2e-104 384.0 303 64.0
Cfa015153 Carpinus fangiana HOM05D004358 ORTHO05D004960 2.1e-104 383.3 374 56.7
PSO732G0278 Papaver somniferum HOM05D004358 ORTHO05D004960 3.5e-104 382.5 367 56.7
Peaxi162Scf00375g00513 Petunia axillaris HOM05D004358 ORTHO05D004960 6.0e-104 381.7 352 59.1
THA.LOC104827388 Tarenaya hassleriana HOM05D004358 ORTHO05D004960 6.0e-104 381.7 278 69.4
Cc00_g17220 Coffea canephora HOM05D004358 ORTHO05D004960 7.8e-104 381.3 345 58.6
Dinv22724 Davidia involucrata HOM05D004358 ORTHO05D004960 1.0e-103 380.9 360 57.2
CARHR125100 Cardamine hirsuta HOM05D004358 ORTHO05D004960 1.3e-103 380.6 358 57.8
BcaB01g04044 Brassica carinata HOM05D004358 ORTHO05D004960 3.0e-103 379.4 357 56.6
Hund03151 Selenicereus undatus HOM05D004358 ORTHO05D004960 3.9e-103 379.0 427 51.3
Gorai.011G146700 Gossypium raimondii HOM05D004358 ORTHO05D004960 5.1e-103 378.6 365 57.5
AL4G26720 Arabidopsis lyrata HOM05D004358 ORTHO05D004960 8.7e-103 377.9 330 60.6
PSO675G5046 Papaver somniferum HOM05D004358 ORTHO05D004960 8.7e-103 377.9 367 55.9
Sopen06g029780 Solanum pennellii HOM05D004358 ORTHO05D004960 8.7e-103 377.9 349 59.0
Carub.0001s0527 Capsella rubella HOM05D004358 ORTHO05D004960 1.1e-102 377.5 349 58.2
A09p67250 Brassica napus HOM05D004358 ORTHO05D004960 1.9e-102 376.7 327 60.9
MSTRG.6615 Avicennia marina HOM05D004358 ORTHO05D004960 4.3e-102 375.6 337 58.2
CANSAT78G2120 Cannabis sativa HOM05D004358 ORTHO05D004960 4.3e-102 375.6 341 58.9
Potri.007G127600 Populus trichocarpa HOM05D004358 ORTHO05D004960 4.3e-102 375.6 356 57.9
AT2G31450 Arabidopsis thaliana HOM05D004358 ORTHO05D004960 7.3e-102 374.8 335 59.1
BcaC01g05950 Brassica carinata HOM05D004358 ORTHO05D004960 1.3e-101 374.0 339 60.2
BolC3t14451H Brassica oleracea HOM05D004358 ORTHO05D004960 1.3e-101 374.0 358 57.5
Aa31LG5G5430 Aethionema arabicum HOM05D004358 ORTHO05D004960 1.6e-101 373.6 349 57.9
Thhalv10007955m.g Eutrema salsugineum HOM05D004358 ORTHO05D004960 1.6e-101 373.6 361 58.4
C03p20720 Brassica napus HOM05D004358 ORTHO05D004960 3.6e-101 372.5 329 59.9
CiPaw.02G055200 Carya illinoinensis HOM05D004358 ORTHO05D004960 3.6e-101 372.5 337 58.8
BraA09t42058Z Brassica rapa HOM05D004358 ORTHO05D005739 4.8e-101 372.1 249 71.9
TAR362G1164 Trochodendron aralioides HOM05D004358 ORTHO05D004960 4.8e-101 372.1 375 56.0
AL1G15860 Arabidopsis lyrata HOM05D004358 ORTHO05D004960 8.1e-101 371.3 349 57.3
FvH4_4g10690 Fragaria vesca HOM05D004358 ORTHO05D004960 8.1e-101 371.3 254 70.5
FAN12G1706 Fragaria x ananassa HOM05D004358 ORTHO05D004960 8.1e-101 371.3 239 74.1
Solyc06g073400.3 Solanum lycopersicum HOM05D004358 ORTHO05D004960 8.1e-101 371.3 365 55.9
unitig_8.g4603 Utricularia gibba HOM05D004358 ORTHO05D004960 8.1e-101 371.3 336 58.3
CAN.G65.181 Capsicum annuum HOM05D004358 ORTHO05D004960 1.1e-100 370.9 350 58.6
FAN12G4165 Fragaria x ananassa HOM05D004358 ORTHO05D004960 1.1e-100 370.9 254 70.5
Ciclev10020813m.g Citrus clementina HOM05D004358 ORTHO05D004960 1.4e-100 370.5 381 53.5
COL.COLO4_02723 Corchorus olitorius HOM05D004358 ORTHO05D004960 1.4e-100 370.5 364 55.5
TAR636G1513 Trochodendron aralioides HOM05D004358 ORTHO05D004960 1.8e-100 370.2 258 69.0
Carub.0004s1278 Capsella rubella HOM05D004358 ORTHO05D004960 2.4e-100 369.8 325 60.0
Phvul.011G055100 Phaseolus vulgaris HOM05D004358 ORTHO05D004960 3.1e-100 369.4 254 70.1
BraA03t11028Z Brassica rapa HOM05D004358 ORTHO05D004960 9.0e-100 367.9 369 56.6
AT1G05900 Arabidopsis thaliana HOM05D004358 ORTHO05D004960 1.5e-99 367.1 354 56.2
Atru.chr3.1531 Acer truncatum HOM05D004358 ORTHO05D004960 2.0e-99 366.7 246 71.1
A03p17630 Brassica napus HOM05D004358 ORTHO05D004960 2.0e-99 366.7 376 56.6
Lalb_Chr01g0003211 Lupinus albus HOM05D004358 ORTHO05D004960 2.0e-99 366.7 251 69.7
PSO732G0822 Papaver somniferum HOM05D004358 ORTHO05D004960 2.0e-99 366.7 246 71.1
arahy.Tifrunner.gnm1.ann1.CJKM5C Arachis hypogaea HOM05D004358 ORTHO05D004960 2.6e-99 366.3 245 71.4
Glyma.11G128600 Glycine max HOM05D004358 ORTHO05D004960 2.6e-99 366.3 247 72.1
C08p51540 Brassica napus HOM05D004358 ORTHO05D004960 5.8e-99 365.2 340 57.6
Manes.04G041200 Manihot esculenta HOM05D004358 ORTHO05D004960 5.8e-99 365.2 324 58.6
Lj3g0009399 Lotus japonicus HOM05D004358 ORTHO05D004960 9.9e-99 364.4 383 54.8
BolC8t52682H Brassica oleracea HOM05D004358 ORTHO05D004960 1.7e-98 363.6 363 54.8
BcaC07g42102 Brassica carinata HOM05D004358 ORTHO05D004960 2.2e-98 363.2 249 69.9
Ca_20780_v3 Cicer arietinum L. HOM05D004358 ORTHO05D004960 8.4e-98 361.3 241 72.2
vmacro15647 Vaccinium macrocarpon HOM05D004358 ORTHO05D004960 8.4e-98 361.3 426 50.0
VMungo1127G0908 Vigna mungo HOM05D004358 ORTHO05D004960 8.4e-98 361.3 339 57.5
Psat7g213960 Pisum sativum HOM05D004358 ORTHO05D004960 1.1e-97 360.9 272 66.2
Medtr4g067060 Medicago truncatula HOM05D004358 ORTHO05D004960 2.4e-97 359.8 250 70.0
TPR.G34203 Trifolium pratense HOM05D004358 ORTHO05D004960 2.4e-97 359.8 259 68.7
FAN07G2248 Fragaria x ananassa HOM05D004358 ORTHO05D004960 4.2e-97 359.0 317 59.0
Sabra07G0103600 Salix brachista HOM05D004358 ORTHO05D004960 7.1e-97 358.2 366 54.9
SalBow7G0323 Salvia bowleyana HOM05D004358 ORTHO05D004960 2.7e-96 356.3 330 56.1
Atru.chr3.1534 Acer truncatum HOM05D004358 ORTHO05D004960 7.8e-96 354.8 253 68.8
MELO3C017721.2 Cucumis melo HOM05D004358 ORTHO05D004960 3.9e-95 352.4 365 53.2
SGA_v2.0_scaffold181G39728 Striga asiatica HOM05D004358 ORTHO05D004960 2.5e-94 349.7 361 54.3
CsaV3_4G003300 Cucumis sativus L. HOM05D004358 ORTHO05D004960 7.3e-94 348.2 358 52.8
CSS0013619 Camellia sinensis var. sinensis HOM05D004358 ORTHO05D004960 9.6e-94 347.8 237 69.2
ATR0686G198 Amborella trichopoda HOM05D004358 ORTHO05D004960 6.2e-93 345.1 335 54.6
Lj3g0017360 Lotus japonicus HOM05D004358 ORTHO05D004960 1.4e-92 344.0 248 67.7
Sed0019525 Sechium edule HOM05D004358 ORTHO05D004960 5.3e-92 342.0 278 61.9
Rhsim02G0076600 Rhododendron simsii HOM05D004358 ORTHO05D004960 9.0e-92 341.3 522 42.0
Ciclev10020816m.g Citrus clementina HOM05D004358 ORTHO05D004960 1.2e-91 340.9 345 53.3
Gohir.D10G133000 Gossypium hirsutum HOM05D004358 ORTHO05D004960 3.4e-91 339.3 362 53.6
PGR142G0453 Punica granatum HOM05D004358 ORTHO05D004960 9.9e-91 337.8 351 51.9
arahy.Tifrunner.gnm1.ann1.VZ0ARL Arachis hypogaea HOM05D004358 ORTHO05D004960 8.4e-90 334.7 248 66.1
Lsat_1_v5_gn_8_80540 Lactuca sativa HOM05D004358 ORTHO05D004960 1.1e-89 334.3 316 56.3
Peaxi162Scf00058g01717 Petunia axillaris HOM05D004358 ORTHO05D004960 1.1e-89 334.3 314 56.7
HanXRQChr06g0172341 Helianthus annuus HOM05D004358 ORTHO05D004960 2.7e-88 329.7 340 55.0
Nitab4.5_0001787g0060 Nicotiana tabacum HOM05D004358 ORTHO05D004960 2.7e-88 329.7 328 53.7
CAN.G749.19 Capsicum annuum HOM05D004358 ORTHO05D004960 4.6e-88 328.9 309 56.3
Glyma.13G343700 Glycine max HOM05D004358 ORTHO05D004960 7.9e-88 328.2 243 66.3
ECA236G3148 Erigeron canadensis HOM05D004358 ORTHO05D004960 1.0e-87 327.8 309 55.7
Ca_01263_v3 Cicer arietinum L. HOM05D004358 ORTHO05D004960 1.9e-86 323.6 253 62.8
PGSC0003DMG401006099 Solanum tuberosum HOM05D004358 ORTHO05D004960 2.5e-86 323.2 306 55.6
Phvul.005G152500 Phaseolus vulgaris HOM05D004358 ORTHO05D004960 3.3e-86 322.8 246 65.0
Thecc.04G185400 Theobroma cacao HOM05D004358 ORTHO05D004960 9.6e-86 321.2 372 50.3
Zm00001eb406830 Zea mays HOM05D004358 ORTHO05D004960 1.6e-85 320.5 346 50.3
ECA236G1172 Erigeron canadensis HOM05D004358 ORTHO05D004960 3.7e-85 319.3 315 55.6
Sopen09g031880 Solanum pennellii HOM05D004358 ORTHO05D004960 1.8e-84 317.0 306 53.6
Medtr2g098660 Medicago truncatula HOM05D004358 ORTHO05D004960 3.1e-84 316.2 249 62.2
Aqoxy7G00192 Aquilegia oxysepala HOM05D004358 ORTHO05D004960 2.6e-83 313.2 332 52.1
Nitab4.5_0000941g0030 Nicotiana tabacum HOM05D004358 ORTHO05D004960 7.6e-83 311.6 328 52.1
CARHR005460 Cardamine hirsuta HOM05D004358 ORTHO05D004960 1.4e-81 307.4 186 76.9
arahy.Tifrunner.gnm1.ann1.98UW30 Arachis hypogaea HOM05D004358 ORTHO05D004960 2.5e-81 306.6 226 65.5
Haze_01520 Corylus avellana HOM05D004358 ORTHO05D004960 1.2e-80 304.3 205 69.8
arahy.Tifrunner.gnm1.ann1.Z962T9 Arachis hypogaea HOM05D004358 ORTHO05D004960 2.1e-80 303.5 203 70.0
Nitab4.5_0003132g0140 Nicotiana tabacum HOM05D004358 ORTHO05D004960 2.7e-80 303.1 382 50.3
QL10p048514 Quercus lobata HOM05D004358 ORTHO05D004960 3.5e-80 302.8 182 75.8
SMO347G0587 Selaginella moellendorffii HOM05D004358 ORTHO05D004960 3.5e-80 302.8 238 62.2
DCAR_028143 Daucus carota HOM05D004358 ORTHO05D004960 1.3e-79 300.8 187 75.4
SHI24906 Sapria himalayana HOM05D004358 ORTHO05D004960 2.3e-79 300.1 307 52.8
Mapoly0058s0068 Marchantia polymorpha HOM05D004358 ORTHO05D004960 3.3e-78 296.2 265 55.5
Nn1g09578 Nelumbo nucifera HOM05D004358 ORTHO05D004960 1.3e-77 294.3 208 66.8
Eucgr.H00376 Eucalyptus grandis HOM05D004358 ORTHO05D004960 1.7e-74 283.9 179 73.2
Aqoxy7G00191 Aquilegia oxysepala HOM05D004358 ORTHO05D004960 2.2e-74 283.5 331 47.1
Solyc09g083003.1 Solanum lycopersicum HOM05D004358 ORTHO05D004960 1.9e-73 280.4 187 70.1
ClCG07G015600 Citrullus lanatus HOM05D004358 ORTHO05D004960 3.2e-73 279.6 326 48.5
Mapoly0058s0067 Marchantia polymorpha HOM05D004358 ORTHO05D004960 3.5e-72 276.2 255 55.3
CBR_g29622 Chara braunii HOM05D004358 ORTHO05D004960 5.1e-71 272.3 244 55.3
Sp1g04740 Schrenkiella parvula HOM05D004358 ORTHO05D004960 3.3e-70 269.6 346 46.2
Psat1g007160 Pisum sativum HOM05D004358 ORTHO05D004960 1.5e-67 260.8 209 61.7
Migut.M00111 Erythranthe guttata HOM05D004358 ORTHO05D004960 8.5e-66 255.0 280 52.9
SalBow7G1435 Salvia bowleyana HOM05D004358 ORTHO05D004960 3.1e-60 236.5 129 76.7
Haze_27447 Corylus avellana HOM05D004358 ORTHO05D004960 3.8e-50 203.0 229 45.9
Gohir.A10G133700 Gossypium hirsutum HOM05D004358 ORTHO05D004960 3.8e-50 203.0 272 48.2
Ca_18838_v3 Cicer arietinum L. HOM05D004358 ORTHO05D004960 6.7e-47 192.2 114 73.7
PGSC0003DMG401026906 Solanum tuberosum HOM05D004358 ORTHO05D004960 1.3e-45 188.0 107 77.6
Pp3c17_17810 Physcomitrium patens HOM05D004358 ORTHO05D004960 2.4e-44 183.7 251 39.0
Cfa026201 Carpinus fangiana HOM05D004358 ORTHO05D004960 1.1e-41 174.9 231 40.3
Glyma.12G053100 Glycine max HOM05D004358 ORTHO05D004960 1.6e-40 171.0 104 75.0
CAN.G80.26 Capsicum annuum HOM05D004358 ORTHO05D004960 4.4e-38 162.9 129 60.5
AagrBONN_evm.TU.Sc2ySwM_368.679 Anthoceros agrestis HOM05D004358 ORTHO05D004960 1.1e-36 158.3 198 43.4
DCAR_028139 Daucus carota HOM05D004358 ORTHO05D004960 8.0e-32 142.1 75 80.0
Mapoly0058s0064 Marchantia polymorpha HOM05D004358 ORTHO05D004960 2.8e-29 133.7 100 62.0
BcaC07g42101 Brassica carinata HOM05D004358 ORTHO05D004960 6.6e-26 122.5 99 62.6
Cpa.g.sc41.25 Carica papaya HOM05D004358 ORTHO05D004960 1.8e-23 114.4 69 73.9
Cpa.g.sc41.31 Carica papaya HOM05D004358 ORTHO05D004960 3.4e-22 110.2 68 72.1
Rhsim02G0076400 Rhododendron simsii HOM05D004358 ORTHO05D004960 2.1e-16 90.9 92 48.9
PGSC0003DMG402026906 Solanum tuberosum HOM05D004358 ORTHO05D004960 3.6e-16 90.1 159 42.8
Ca_29315_v3 Cicer arietinum L. HOM05D004358 ORTHO05D004960 4.7e-16 89.7 142 34.5
Lj3A203T17 Lonicera japonica HOM05D004358 ORTHO05D004960 1.2e-14 85.1 88 55.7
QL10p048520 Quercus lobata HOM05D004358 ORTHO05D004960 1.2e-14 85.1 81 58.0
Cre17.g732050 Chlamydomonas reinhardtii HOM05D004358 ORTHO05D004960 7.5e-14 82.4 169 30.2
Glyma.15G030650 Glycine max HOM05D004358 ORTHO05D004960 7.5e-14 82.4 95 51.6
SalBow1G3505 Salvia bowleyana HOM05D004358 ORTHO05D004960 2.2e-13 80.9 118 46.6
PGSC0003DMG402006099 Solanum tuberosum HOM05D004358 ORTHO05D004960 2.9e-13 80.5 56 62.5
Haze_01519 Corylus avellana HOM05D004358 ORTHO05D004960 1.2e-11 75.1 136 35.3
Gohir.D08G144100 Gossypium hirsutum HOM05D004358 ORTHO05D004960 1.6e-11 74.7 46 73.9
Oeu007466.1 Olea europaea HOM05D004358 ORTHO05D004960 1.7e-10 71.2 136 39.0
Pp3c18_200 Physcomitrium patens HOM05D006570 ORTHO05D008193 2.3e-10 70.9 151 29.8
PRCOL_00001550 Prasinoderma coloniale HOM05D004358 ORTHO05D004960 2.5e-09 67.4 123 30.1
BcaC01g05951 Brassica carinata HOM05D004358 ORTHO05D004960 3.3e-09 67.0 121 39.7
Cre02.g082000 Chlamydomonas reinhardtii HOM05D006570 ORTHO05D008193 9.5e-09 65.5 222 24.3
CiPaw.07G077200 Carya illinoinensis HOM05D006570 ORTHO05D008193 2.8e-08 63.9 267 24.0
CAN.G541.14 Capsicum annuum HOM05D004358 ORTHO05D004960 6.2e-08 62.8 52 55.8
Lsat_1_v5_gn_8_98640 Lactuca sativa HOM05D006570 ORTHO05D008193 6.2e-08 62.8 161 28.0
Lj3C203G5 Lonicera japonica HOM05D009066 ORTHO05D004960 1.4e-07 61.6 37 73.0
Mapoly0043s0062 Marchantia polymorpha HOM05D006570 ORTHO05D008193 3.1e-07 60.5 169 28.4
Solyc09g083007.1 Solanum lycopersicum HOM05D004358 ORTHO05D004960 4.0e-07 60.1 123 34.1
CAN.G1292.3 Capsicum annuum HOM05D004358 ORTHO05D004960 8.9e-07 58.9 50 52.0
Thecc.04G185600 Theobroma cacao HOM05D004358 ORTHO05D004960 8.9e-07 58.9 51 58.8
Actinidia23139 Actinidia chinensis HOM05D006570 ORTHO05D008193 4.4e-06 56.6 154 26.0
Os12g0211400 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 7.5e-06 55.8 168 25.6
PGR083G1749 Punica granatum HOM05D006570 ORTHO05D008193 9.8e-06 55.5 151 27.8
vmacro09566 Vaccinium macrocarpon HOM05D000222 ORTHO05D051539 9.8e-06 55.5 32 81.2


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