Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 5.9e-144 514.2 266 100.0
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 2.6e-83 312.8 290 64.1
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 5.1e-63 245.4 174 74.7
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 8.1e-61 238.0 172 74.4
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 3.4e-51 206.1 152 67.8
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 3.4e-51 206.1 163 68.1
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 7.6e-51 204.9 153 68.6
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 9.9e-51 204.5 164 68.9
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 9.9e-51 204.5 116 85.3
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 1.7e-50 203.8 152 68.4
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 2.2e-50 203.4 152 67.1
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 2.2e-50 203.4 152 68.4
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 6.4e-50 201.8 139 72.7
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 8.4e-50 201.4 119 81.5
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 8.4e-50 201.4 161 68.3
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 1.4e-49 200.7 152 65.8
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 1.4e-49 200.7 156 67.3
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 1.9e-49 200.3 185 57.3
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 3.2e-49 199.5 206 56.3
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 4.2e-49 199.1 151 66.9
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 7.1e-49 198.4 150 67.3
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 9.3e-49 198.0 156 66.0
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 9.3e-49 198.0 116 81.9
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 2.7e-48 196.4 130 76.9
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 2.7e-48 196.4 151 69.5
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 3.5e-48 196.1 152 65.8
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 6.0e-48 195.3 151 68.9
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 6.0e-48 195.3 153 66.0
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 1.3e-47 194.1 151 66.9
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 1.8e-47 193.7 159 62.9
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 1.8e-47 193.7 116 80.2
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 2.3e-47 193.4 159 62.9
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 2.3e-47 193.4 116 81.0
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 2.3e-47 193.4 150 68.0
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 2.3e-47 193.4 116 81.9
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 3.0e-47 193.0 152 69.1
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 3.0e-47 193.0 114 81.6
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 3.0e-47 193.0 150 68.0
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 3.9e-47 192.6 152 64.5
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 6.7e-47 191.8 157 61.8
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 6.7e-47 191.8 160 62.5
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 8.7e-47 191.4 115 80.0
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 8.7e-47 191.4 119 76.5
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 1.5e-46 190.7 134 71.6
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.9e-46 190.3 173 60.1
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 1.9e-46 190.3 173 60.1
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 2.5e-46 189.9 153 65.4
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 3.3e-46 189.5 121 77.7
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 5.6e-46 188.7 117 79.5
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.3e-45 187.6 116 77.6
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 1.6e-45 187.2 115 79.1
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 1.6e-45 187.2 119 74.8
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 2.1e-45 186.8 150 64.0
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 2.8e-45 186.4 152 64.5
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 2.8e-45 186.4 115 78.3
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.8e-45 186.4 165 62.4
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 3.7e-45 186.0 116 76.7
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 3.7e-45 186.0 116 77.6
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 3.7e-45 186.0 116 77.6
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 4.8e-45 185.7 115 76.5
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 4.8e-45 185.7 122 76.2
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 4.8e-45 185.7 175 58.3
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 6.2e-45 185.3 116 76.7
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 6.2e-45 185.3 116 75.9
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 6.2e-45 185.3 115 76.5
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 6.2e-45 185.3 115 76.5
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 8.2e-45 184.9 118 77.1
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 1.1e-44 184.5 155 64.5
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 1.1e-44 184.5 116 76.7
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 1.1e-44 184.5 169 58.6
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 1.1e-44 184.5 150 64.7
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 4.0e-44 182.6 154 64.3
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 4.0e-44 182.6 154 66.2
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 4.0e-44 182.6 154 64.3
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 4.0e-44 182.6 154 64.3
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 4.0e-44 182.6 121 74.4
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 6.9e-44 181.8 123 74.8
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 6.9e-44 181.8 161 59.0
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 1.5e-43 180.6 171 59.6
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.5e-43 180.6 154 63.6
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 2.0e-43 180.3 159 60.4
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 4.5e-43 179.1 155 60.6
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 5.8e-43 178.7 183 54.6
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 7.6e-43 178.3 158 60.8
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.3e-42 177.6 140 67.1
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 2.9e-42 176.4 152 63.8
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 3.8e-42 176.0 166 59.0
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 4.9e-42 175.6 131 67.2
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 1.1e-41 174.5 151 60.9
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 1.1e-41 174.5 151 60.9
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 1.4e-41 174.1 129 69.0
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 1.6e-40 170.6 116 75.0
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 3.5e-40 169.5 116 74.1
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 4.6e-40 169.1 116 75.0
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 4.6e-40 169.1 115 75.7
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 1.0e-39 167.9 104 77.9
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 1.0e-39 167.9 104 77.9
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 2.3e-39 166.8 104 76.9
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 2.3e-39 166.8 104 76.9
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 2.3e-39 166.8 104 76.9
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 1.1e-38 164.5 115 70.4
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 4.1e-36 156.0 95 78.9
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 2.2e-34 150.2 115 63.5
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 4.6e-32 142.5 116 57.8
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 6.1e-32 142.1 90 77.8
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.0e-31 141.4 91 79.1
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 3.9e-31 139.4 168 49.4
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 3.7e-29 132.9 129 57.4
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 6.9e-28 128.6 114 57.9
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 1.3e-26 124.4 81 70.4
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 1.4e-20 104.4 59 83.1
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 4.8e-13 79.3 112 42.0
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 2.0e-11 73.9 119 42.0
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 2.6e-11 73.6 97 43.3


User provided reference genes

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