Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 4.7e-245 850.9 472 100.0
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 2.6e-155 552.7 457 67.2
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 4.4e-150 535.4 452 68.1
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 4.2e-145 518.8 476 61.6
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 7.2e-145 518.1 473 61.5
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 4.0e-143 512.3 472 62.9
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 1.3e-141 507.3 460 64.8
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 3.7e-141 505.8 485 62.3
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 1.4e-140 503.8 457 62.8
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 8.5e-138 494.6 467 62.5
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 1.1e-137 494.2 461 63.1
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 1.5e-137 493.8 459 62.3
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 5.5e-137 491.9 449 64.6
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 5.5e-137 491.9 462 62.8
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 1.2e-136 490.7 474 61.6
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 1.2e-136 490.7 453 62.3
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 1.4e-135 487.3 448 62.7
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 3.7e-133 479.2 480 59.8
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.1e-132 477.6 487 60.2
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 1.4e-132 477.2 465 60.0
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 7.0e-132 474.9 471 60.7
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 1.2e-131 474.2 457 60.4
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 5.9e-131 471.9 458 60.3
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 7.7e-131 471.5 452 59.7
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 1.7e-130 470.3 446 62.3
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 2.3e-130 469.9 456 62.3
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 6.6e-130 468.4 457 60.2
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 8.6e-130 468.0 487 58.9
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 1.1e-129 467.6 454 60.6
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 1.5e-129 467.2 449 62.6
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 5.5e-129 465.3 446 59.2
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 9.5e-129 464.5 451 60.8
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 2.1e-128 463.4 460 60.4
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 2.1e-128 463.4 451 59.6
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 2.8e-128 463.0 448 59.2
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 4.7e-128 462.2 468 58.5
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 1.4e-127 460.7 448 59.8
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 1.8e-127 460.3 455 60.2
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 3.0e-127 459.5 462 60.2
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 4.0e-127 459.1 475 58.9
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 6.8e-127 458.4 484 58.1
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 1.2e-126 457.6 451 58.1
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 1.2e-126 457.6 452 60.4
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 2.0e-126 456.8 467 57.8
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 2.6e-126 456.4 451 58.5
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 9.8e-126 454.5 447 57.3
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 3.7e-125 452.6 451 59.6
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 3.7e-125 452.6 450 57.1
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 7.0e-124 448.4 446 60.1
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 7.0e-124 448.4 471 56.5
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 9.2e-124 448.0 462 59.1
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 5.9e-123 445.3 451 58.3
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 1.0e-122 444.5 474 56.5
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 2.3e-122 443.4 449 59.2
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 3.8e-122 442.6 465 56.1
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 8.6e-122 441.4 448 57.8
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 1.9e-121 440.3 471 54.8
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 3.3e-121 439.5 465 57.4
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 2.1e-120 436.8 478 56.5
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 1.4e-119 434.1 471 53.5
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 2.3e-119 433.3 470 53.0
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 1.2e-118 431.0 452 59.1
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 5.8e-118 428.7 440 58.6
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 1.7e-117 427.2 452 56.0
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 2.2e-117 426.8 470 52.8
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 8.3e-117 424.9 448 57.4
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 2.4e-116 423.3 465 52.9
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 3.2e-116 422.9 445 54.6
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 1.2e-115 421.0 455 55.4
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 2.7e-115 419.9 470 54.7
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 4.6e-115 419.1 472 52.3
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 1.7e-114 417.2 449 53.7
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 2.3e-114 416.8 454 55.1
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 2.3e-114 416.8 636 46.7
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 4.3e-113 412.5 471 56.1
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 4.3e-113 412.5 455 54.1
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 8.0e-112 408.3 502 50.8
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 2.6e-110 403.3 478 50.4
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 3.4e-110 402.9 448 52.0
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 6.4e-109 398.7 425 56.7
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 2.7e-107 393.3 445 51.9
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 1.7e-106 390.6 459 51.9
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 5.6e-105 385.6 480 53.1
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 2.8e-104 383.3 490 49.4
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 5.8e-102 375.6 340 66.2
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 1.3e-101 374.4 408 57.8
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 1.7e-98 364.0 408 56.6
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 2.4e-95 353.6 324 64.2
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 5.8e-94 349.0 335 61.5
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 9.9e-94 348.2 451 49.2
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 2.4e-92 343.6 322 59.9
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 2.8e-88 330.1 417 49.6
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 3.9e-82 309.7 384 55.2
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 2.1e-80 303.9 403 50.1
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 6.2e-80 302.4 406 45.8
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 4.5e-78 296.2 271 65.3
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 1.3e-77 294.7 308 60.7
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 1.3e-74 284.6 403 46.7
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 8.7e-74 282.0 322 59.3
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 9.0e-71 271.9 335 46.6
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 1.3e-69 268.1 279 54.8
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 2.6e-62 243.8 306 52.6
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 3.8e-61 240.0 288 50.3
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 7.1e-60 235.7 445 38.7
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 1.5e-54 218.0 377 43.2
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 2.0e-49 201.1 598 32.4
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 2.1e-43 181.0 264 45.5
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 2.6e-41 174.1 205 49.8
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 3.3e-41 173.7 337 40.7
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 4.8e-40 169.9 103 79.6
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 8.2e-40 169.1 102 79.4
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 3.8e-37 160.2 93 78.5
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.8e-34 151.4 183 57.9
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 4.2e-28 130.2 137 54.7
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 1.0e-26 125.6 185 50.8
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 2.6e-25 120.9 100 63.0
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 4.1e-23 113.6 122 60.7
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 5.5e-20 103.2 113 54.0
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 2.1e-19 101.3 133 51.1
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 2.7e-19 100.9 116 49.1
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.3e-16 92.0 357 28.0
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 2.8e-16 90.9 101 44.6
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 1.1e-15 89.0 54 74.1
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 2.4e-15 87.8 46 82.6
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 3.5e-14 84.0 50 76.0
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 3.5e-14 84.0 50 76.0
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 1.3e-13 82.0 123 48.0
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 9.5e-12 75.9 83 44.6
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 3.6e-11 73.9 52 63.5
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 5.2e-10 70.1 50 62.0
Ah.14g086750 Amaranthus hybridus HOM05D005431 ORTHO05D006762 9.8e-09 65.9 61 55.7
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 1.7e-08 65.1 56 57.1
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 6.3e-08 63.2 83 45.8
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 4.1e-07 60.5 41 68.3
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 2.0e-06 58.2 91 40.7


User provided reference genes

Program Settings