Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 8.3e-244 846.7 444 100.0
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 1.2e-231 806.2 444 94.6
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 7.6e-229 797.0 457 90.2
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 1.2e-226 789.6 457 90.2
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 1.5e-224 782.7 452 91.4
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 1.0e-217 760.0 444 90.8
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 6.0e-202 707.6 447 84.8
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 5.8e-197 691.0 447 82.1
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 2.4e-190 669.1 447 83.7
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 1.2e-189 666.8 447 83.0
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 3.2e-171 605.5 483 72.0
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 8.2e-167 590.9 466 72.1
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 1.2e-138 497.3 480 57.5
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 8.0e-138 494.6 483 58.0
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.0e-137 494.2 483 57.8
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 1.7e-135 486.9 431 59.2
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 3.7e-135 485.7 459 58.0
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 4.9e-135 485.3 447 57.7
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 8.3e-135 484.6 456 59.6
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.1e-134 484.2 461 57.9
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 1.9e-134 483.4 449 57.9
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 2.4e-134 483.0 434 59.7
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 7.0e-134 481.5 483 55.9
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 1.6e-133 480.3 482 55.4
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 2.0e-133 479.9 448 60.0
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 2.0e-133 479.9 485 56.3
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 2.0e-133 479.9 445 59.6
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 2.0e-133 479.9 442 61.8
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 6.0e-133 478.4 443 58.2
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 5.0e-132 475.3 452 57.7
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 1.5e-131 473.8 446 57.4
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 5.6e-131 471.9 442 57.2
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 5.6e-131 471.9 445 58.2
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 7.3e-131 471.5 433 58.2
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 7.3e-131 471.5 442 57.5
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 2.8e-130 469.5 450 58.9
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 3.6e-130 469.2 442 58.1
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 1.1e-129 467.6 440 58.0
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 1.1e-129 467.6 448 57.4
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 1.8e-129 466.8 437 57.2
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 4.0e-129 465.7 431 57.8
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 4.0e-129 465.7 453 56.7
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 5.2e-129 465.3 440 57.5
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 2.0e-128 463.4 450 56.2
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 2.0e-128 463.4 465 54.6
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 3.4e-128 462.6 451 56.5
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 4.4e-128 462.2 462 55.4
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 5.8e-128 461.8 461 55.3
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 9.8e-128 461.1 434 57.6
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 1.7e-127 460.3 480 54.6
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 8.3e-127 458.0 440 56.6
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 1.1e-126 457.6 447 56.2
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 1.9e-126 456.8 464 55.6
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 5.4e-126 455.3 461 54.9
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.2e-125 454.1 446 55.8
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 1.3e-124 450.7 431 59.6
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 3.9e-124 449.1 427 60.4
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 1.9e-123 446.8 441 56.2
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 2.1e-122 443.4 433 53.8
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 2.1e-122 443.4 517 50.3
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 3.6e-122 442.6 427 56.0
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 6.2e-122 441.8 430 56.5
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 8.1e-122 441.4 443 54.2
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 8.9e-121 438.0 435 55.4
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 1.2e-120 437.6 435 59.1
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 2.6e-120 436.4 452 51.8
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 5.8e-120 435.3 460 54.8
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 4.9e-119 432.2 458 51.5
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 6.4e-119 431.8 432 53.0
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 6.4e-119 431.8 432 54.4
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 6.4e-119 431.8 423 55.8
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 1.4e-118 430.6 439 54.2
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 2.4e-118 429.9 428 55.6
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 1.2e-117 427.6 425 56.2
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 1.3e-116 424.1 434 55.5
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 1.9e-115 420.2 461 51.2
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 3.3e-115 419.5 423 55.8
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 2.1e-114 416.8 472 52.3
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 5.8e-112 408.7 260 83.8
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 5.8e-112 408.7 478 50.2
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 5.4e-110 402.1 440 52.7
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 9.3e-110 401.4 435 52.2
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 1.1e-107 394.4 477 49.5
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 6.9e-105 385.2 422 51.9
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 1.1e-99 367.9 431 50.1
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 1.1e-99 367.9 328 60.7
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 5.6e-99 365.5 382 52.9
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 7.3e-99 365.2 647 40.3
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 1.2e-96 357.8 376 53.5
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 2.2e-95 353.6 372 53.2
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 2.4e-94 350.1 317 58.0
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 7.9e-93 345.1 336 56.8
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 8.7e-92 341.7 314 57.6
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 1.5e-88 330.9 197 86.3
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 1.1e-86 324.7 339 54.9
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 1.5e-83 314.3 379 49.9
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 2.5e-83 313.5 388 49.2
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 4.3e-83 312.8 307 55.7
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 1.8e-76 290.8 392 46.7
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.1e-75 288.1 347 49.9
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 4.1e-73 279.6 324 49.4
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.4e-70 271.2 205 65.9
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 2.5e-67 260.4 264 54.2
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 5.1e-60 236.1 421 39.2
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 1.4e-49 201.4 585 31.6
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 5.3e-49 199.5 277 42.6
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 1.0e-39 168.7 319 37.9
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 2.9e-39 167.2 98 80.6
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 5.0e-39 166.4 371 34.5
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 7.2e-38 162.5 93 81.7
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 3.6e-37 160.2 101 77.2
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 2.3e-36 157.5 246 43.9
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 6.8e-36 156.0 161 55.3
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 1.0e-28 132.1 130 55.4
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 2.3e-23 114.4 181 40.3
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.1e-22 112.1 97 58.8
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 5.8e-19 99.8 178 41.0
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 5.8e-19 99.8 112 49.1
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 1.3e-18 98.6 107 54.2
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 5.4e-17 93.2 54 79.6
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 3.5e-16 90.5 323 28.2
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 6.0e-16 89.7 49 87.8
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 6.0e-16 89.7 49 87.8
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 5.0e-15 86.7 92 48.9
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 5.0e-15 86.7 144 41.0
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 6.6e-15 86.3 46 82.6
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 8.6e-15 85.9 120 47.5
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 1.2e-11 75.5 83 45.8
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 9.8e-11 72.4 52 65.4
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 1.9e-09 68.2 49 61.2
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 5.4e-09 66.6 56 57.1
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 4.6e-08 63.5 48 64.6
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 1.9e-06 58.2 41 70.7
RcHm_v2.0_Chr5g0076741 Rosa chinensis HOM05D005431 ORTHO05D006762 5.6e-06 56.6 67 50.7
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 5.6e-06 56.6 109 41.3
Ah.14g086750 Amaranthus hybridus HOM05D005431 ORTHO05D006762 7.3e-06 56.2 34 70.6


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