Integrative Orthology Viewer: AT4G01010 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G15990 AT4G01010 AT5G53130 | 3 | |
Anchor point | AT1G01340 AT2G46430 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G01340 AT4G01010 | 2 | ||
Tree-based ortholog | AT1G01340 AT4G01010 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Anchor point | many-to-1 | BD3G09550 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G09550 | 1 | ||
Tree-based ortholog | many-to-many | BD3G09550 BD1G38680 | 2 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00003G00620 | 1 | |
Tree-based ortholog | many-to-1 | CP00096G00020 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G06730 | 1 | |
Hordeum vulgare | Orthologous gene family | many-to-1 | HV159915G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV46231G00010 | 1 | ||
Tree-based ortholog | many-to-many | HV159915G00010 HV46231G00010 HV2582504G00010 | 3 | ||
Musa acuminata | Orthologous gene family | many-to-many | MA04G29580 MA07G16460 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA06G23130 | 1 | ||
Tree-based ortholog | many-to-many | MA05G24950 MA06G14650 MA06G23130 | 3 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-1 | OSINDICA_04G47170 | 1 | |
Anchor point | many-to-1 | OSINDICA_02G14660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_02G14660 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_02G51700 OSINDICA_02G14660 OSINDICA_06G29490 ... | 4 | ||
Oryza sativa ssp. japonica | Anchor point | many-to-1 | OS02G15580 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G33570 | 1 | ||
Tree-based ortholog | many-to-many | OS06G33600 OS02G15580 OS06G33610 ... | 4 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00037G00790 PP00068G00620 PP00211G00370 ... | 4 | |
Tree-based ortholog | many-to-many | PP00149G00350 PP00211G00370 PP00037G00790 ... | 5 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT12G00220 PT15G01910 | 2 | |
Anchor point | many-to-many | PT02G17000 PT14G09790 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT14G09790 PT02G17000 | 2 | ||
Tree-based ortholog | many-to-many | PT15G01910 PT12G00220 | 2 | ||
Setaria italica | Anchor point | many-to-1 | SI001G01530 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI001G01530 | 1 | ||
Tree-based ortholog | many-to-many | SI001G01540 SI001G01530 SI004G17080 ... | 4 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL08G069140 | 1 | |
Anchor point | many-to-1 | SL01G095770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL05G050350 SL01G095770 | 2 | ||
Tree-based ortholog | many-to-many | SL05G050360 SL05G050350 SL05G050380 ... | 7 | ||
Sorghum bicolor | Anchor point | many-to-1 | SB04G009240 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB06G030420 | 1 | ||
Tree-based ortholog | many-to-many | SB04G009240 SB04G009250 SB10G020550 | 3 | ||
Vitis vinifera | Anchor point | many-to-1 | VV15G06270 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV16G06790 | 1 | ||
Tree-based ortholog | many-to-many | VV15G06270 VV16G06790 | 2 | ||
Zea mays | Anchor point | many-to-1 | ZM04G36440 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G36440 | 1 | ||
Tree-based ortholog | many-to-many | ZM04G36450 ZM04G36470 ZM06G15190 ... | 6 |