Gene: OS06G33570 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
OS06G33570
Transcript Identifier
OS06G33570.1
Gene Type
Coding gene
Location
6 : 19546122-19552645 : positive

Family

Gene family
HOM03M000201
(251 genes in 14 species)
specific family
Subfamily
ORTHO03M001891
(9 genes in 6 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Loading...please wait

Descriptions

Description
cyclic nucleotide-gated ion channel 1, putative, expressed
Description (AnnoMine)
Putative cyclic nucleotide-gated ion channel

Identifiers

Identifier Name
transcript_idLOC_OS06G33570.1

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006813IEAInterPropotassium ion transport
GO:0055085IEAInterProtransmembrane transport
GO:0006811IEAInterProion transport
GO:0009620ISOPLAZA Integrative Orthologyresponse to fungusAT2G46440 AT2G46450
GO:0006816ISOPLAZA Integrative Orthologycalcium ion transportAT5G53130

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005249IEAInterProvoltage-gated potassium channel activity
GO:0005216IEAInterProion channel activity
GO:0005516ISOPLAZA Integrative Orthologycalmodulin bindingAT2G46430 AT5G53130
GO:0005261ISOPLAZA Integrative Orthologycation channel activityAT2G46440 AT2G46450
GO:0005242ISOPLAZA Integrative Orthologyinward rectifier potassium channel activityAT5G53130
GO:0005221ISOPLAZA Integrative Orthologyintracellular cyclic nucleotide activated cation channel activityAT5G53130
GO:0022838IEAPLAZA Homologysubstrate-specific channel activityHOM03M000201
GO:0022803IEAPLAZA Homologypassive transmembrane transporter activityHOM03M000201
GO:0015267IEAPLAZA Homologychannel activityHOM03M000201

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020RCA, IEAGene OntologymembraneGR_REF:8210
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT2G46450 AT5G53130

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000595Cyclic nucleotide-binding domain
IPR003938Potassium channel, voltage-dependent, EAG/ELK/ERG
IPR018490Cyclic nucleotide-binding-like
IPR014710RmlC-like jelly roll fold
IPR005821Ion transport domain

Mapman id Description
34.22transport.cyclic nucleotide or calcium regulated channels
No SignalP domains detected for this gene.