Gene: AT5G53130 (Arabidopsis thaliana)

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Gene Identifier
AT5G53130
Transcript Identifier
AT5G53130.1
Gene Type
Coding gene
Location
5 : 21537830-21540490 : negative

Family

Gene family
HOM03M000201
(251 genes in 14 species)
specific family
Subfamily
ORTHO03M001255
(10 genes in 6 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
cyclic nucleotide gated channel 1
Curated Summary
member of Cyclic nucleotide gated channel family
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Identifiers

Identifier Name
aliasATCNGC1
aliascyclic nucleotide gated channel 1
aliasCNGC1
aliasCYCLIC NUCLEOTIDE-GATED CHANNEL 1
uniprotO65717

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006813IGIUniProtpotassium ion transport1 2 3 4 5 6 7
GO:0006816IGIUniProtcalcium ion transport1 2 3 4 5 6 7
GO:0055085IEAInterProtransmembrane transport
GO:0006811IEAInterProion transport

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005261ISSGene Ontologycation channel activity1
GO:0005516IPI, ISS, TASGene Ontologycalmodulin binding1 2 3
GO:0030551ISSGene Ontologycyclic nucleotide binding1
GO:0005242IGIGene Ontologyinward rectifier potassium channel activity1
GO:0005221IGIUniProtintracellular cyclic nucleotide activated cation channel activity1 2 3 4 5 6 7
GO:0030552IEAUniProtcAMP binding1 2 3 4 5 6
GO:0030553IEAUniProtcGMP binding1 2 3 4 5 6
GO:0005216IEAInterProion channel activity
GO:0022838IEAPLAZA Homologysubstrate-specific channel activityHOM03M000201
GO:0022803IEAPLAZA Homologypassive transmembrane transporter activityHOM03M000201
GO:0015267IEAPLAZA Homologychannel activityHOM03M000201

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886IDA, ISM, UniProtplasma membrane1 2 3 4 5 6 7 8
GO:0016021IEAUniProtintegral to membrane1 2 3 4 5 6
GO:0016020IEAInterPromembrane

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000595Cyclic nucleotide-binding domain
IPR005821Ion transport domain
IPR014710RmlC-like jelly roll fold
IPR018490Cyclic nucleotide-binding-like

Mapman id Description
34.22transport.cyclic nucleotide or calcium regulated channels
No SignalP domains detected for this gene.