Gene: AT4G01010 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G01010
Transcript Identifier
AT4G01010.1
Gene Type
Coding gene
Location
4 : 434569-437242 : negative

Family

Gene family
HOM03M000201
(251 genes in 14 species)
specific family
Subfamily
ORTHO03M001255
(10 genes in 6 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
cyclic nucleotide-gated channel 13
Curated Summary
member of Cyclic nucleotide gated channel family
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Identifiers

Identifier Name
aliasATCNGC13
aliasCYCLIC NUCLEOTIDE-GATED CHANNEL 13
aliasCNGC13
aliascyclic nucleotide-gated channel 13
uniprotQ9LD40

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006612RCAGene Ontologyprotein targeting to membrane1
GO:0009693RCAGene Ontologyethylene biosynthetic process1
GO:0009697RCAGene Ontologysalicylic acid biosynthetic process1
GO:0009863RCAGene Ontologysalicylic acid mediated signaling pathway1
GO:0010200RCAGene Ontologyresponse to chitin1
GO:0010363RCAGene Ontologyregulation of plant-type hypersensitive response1
GO:0031348RCAGene Ontologynegative regulation of defense response1
GO:0043069RCAGene Ontologynegative regulation of programmed cell death1
GO:0045087RCAGene Ontologyinnate immune response1
GO:0050832RCAGene Ontologydefense response to fungus1
GO:0055085IEAInterProtransmembrane transport
GO:0006811IEAInterProion transport

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005216IEA, ISSUniProtion channel activity1 2 3
GO:0030551ISSGene Ontologycyclic nucleotide binding1
GO:0005516ISSGene Ontologycalmodulin binding1
GO:0030552IEAUniProtcAMP binding1 2
GO:0030553IEAUniProtcGMP binding1 2
GO:0022838IEAPLAZA Homologysubstrate-specific channel activityHOM03M000201
GO:0022803IEAPLAZA Homologypassive transmembrane transporter activityHOM03M000201
GO:0015267IEAPLAZA Homologychannel activityHOM03M000201

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886IEA, ISMUniProtplasma membrane1 2 3
GO:0016021IEAUniProtintegral to membrane1 2
GO:0016020IEAInterPromembrane

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR018490Cyclic nucleotide-binding-like
IPR000595Cyclic nucleotide-binding domain
IPR014710RmlC-like jelly roll fold
IPR005821Ion transport domain

Mapman id Description
34.22transport.cyclic nucleotide or calcium regulated channels
No SignalP domains detected for this gene.