Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Bo9g139370	Brassica oleracea	HOM04D004410	ORTHO04D006444	8.1e-160	565.8	264	100.0
Bo1g143980	Brassica oleracea	HOM04D004410	ORTHO04D006444	1.0e-133	479.2	265	84.9
Bo7g077080	Brassica oleracea	HOM04D004410	ORTHO04D006444	7.0e-127	456.4	266	81.2
Brara.A03492	Brassica rapa	HOM04D004410	ORTHO04D006444	2.3e-122	441.4	253	82.2
Bo7g077070	Brassica oleracea	HOM04D004410	ORTHO04D006444	8.8e-114	412.9	265	74.3
Bo2g136790	Brassica oleracea	HOM04D004410	ORTHO04D006444	1.2e-113	412.5	261	73.2
Bo2g131800	Brassica oleracea	HOM04D004410	ORTHO04D006444	5.7e-113	410.2	261	72.8
Brara.F03582	Brassica rapa	HOM04D004410	ORTHO04D006444	5.5e-108	393.7	227	80.2
Bo2g130340	Brassica oleracea	HOM04D004410	ORTHO04D006444	1.0e-106	389.4	266	69.5
Brara.B02967	Brassica rapa	HOM04D004410	ORTHO04D006444	1.8e-95	352.1	227	74.0
Brara.F03533	Brassica rapa	HOM04D004410	ORTHO04D006444	1.2e-81	306.2	264	56.8
AL8G10360	Arabidopsis lyrata	HOM04D004410	ORTHO04D006444	2.2e-80	302.0	264	61.0
Bo7g077720	Brassica oleracea	HOM04D004410	ORTHO04D006444	2.9e-80	301.6	265	55.8
Brara.F03531	Brassica rapa	HOM04D004410	ORTHO04D006444	3.2e-79	298.1	256	59.8
Bo7g077740	Brassica oleracea	HOM04D004410	ORTHO04D006444	4.6e-78	294.3	264	59.5
Bo2g131780	Brassica oleracea	HOM04D004410	ORTHO04D006444	5.1e-77	290.8	253	58.9
Bo7g077780	Brassica oleracea	HOM04D004410	ORTHO04D006444	9.5e-76	286.6	263	57.0
Carubv10026957m.g	Capsella rubella	HOM04D004410	ORTHO04D006444	5.2e-74	280.8	259	58.3
AL8G10380	Arabidopsis lyrata	HOM04D004410	ORTHO04D006444	1.2e-73	279.6	256	57.8
THA.LOC104798375	Tarenaya hassleriana	HOM04D004410	ORTHO04D006444	6.2e-67	257.3	252	52.8
AT5G47590	Arabidopsis thaliana	HOM04D004410	ORTHO04D006444	4.2e-47	191.4	145	68.3
TCA.TCM_015984	Theobroma cacao	HOM04D004410	ORTHO04D006444	1.1e-36	156.8	222	40.5
Brara.B02914	Brassica rapa	HOM04D004410	ORTHO04D006444	1.5e-36	156.4	110	63.6
HBR1726G011	Hevea brasiliensis	HOM04D004410	ORTHO04D006444	1.1e-34	150.2	262	34.0
RCO.g.29916.000024	Ricinus communis	HOM04D004410	ORTHO04D006444	1.4e-31	139.8	225	34.7
AT4G16545	Arabidopsis thaliana	HOM04D004410	ORTHO04D006444	1.9e-28	129.4	269	30.5
Carubv10004647m.g	Capsella rubella	HOM04D004410	ORTHO04D006444	6.3e-27	124.4	256	32.0
Bo8g044750	Brassica oleracea	HOM04D004410	ORTHO04D006444	8.2e-27	124.0	245	32.7
AT2G03020	Arabidopsis thaliana	HOM04D004410	ORTHO04D006444	1.1e-26	123.6	266	30.1
Brara.H00868	Brassica rapa	HOM04D004410	ORTHO04D006444	2.4e-26	122.5	276	30.1
RCO.g.29916.000021	Ricinus communis	HOM04D004410	ORTHO04D006444	5.3e-26	121.3	208	33.2
Brara.C04513	Brassica rapa	HOM04D004410	ORTHO04D006444	4.5e-25	118.2	257	30.7
Bo7g104600	Brassica oleracea	HOM04D004410	ORTHO04D006444	2.2e-24	115.9	256	30.5
Bo2g087710	Brassica oleracea	HOM04D004410	ORTHO04D006444	2.2e-24	115.9	206	35.4
Bo7g104550	Brassica oleracea	HOM04D004410	ORTHO04D006444	8.5e-24	114.0	252	28.2
Bo7g104610	Brassica oleracea	HOM04D004410	ORTHO04D006444	1.1e-23	113.6	246	28.9
Brara.C04512	Brassica rapa	HOM04D004410	ORTHO04D006444	1.9e-23	112.8	252	28.2
THA.LOC104815492	Tarenaya hassleriana	HOM04D004410	ORTHO04D006444	4.2e-23	111.7	219	30.6
AL1G32140	Arabidopsis lyrata	HOM04D004410	ORTHO04D006444	7.2e-23	110.9	267	28.5
Carubv10007495m.g	Capsella rubella	HOM04D004410	ORTHO04D006444	2.7e-22	109.0	230	29.6
Brara.A01885	Brassica rapa	HOM04D004410	ORTHO04D006444	2.7e-22	109.0	242	29.3
Tp7g15120	Schrenkiella parvula	HOM04D004410	ORTHO04D006444	3.6e-22	108.6	239	26.8
AL7G38320	Arabidopsis lyrata	HOM04D004410	ORTHO04D006444	1.4e-21	106.7	276	27.2
Tp7g15130	Schrenkiella parvula	HOM04D004410	ORTHO04D006444	3.0e-21	105.5	248	27.0
Carubv10005559m.g	Capsella rubella	HOM04D004410	ORTHO04D006444	1.1e-20	103.6	224	30.4
Bo1g053580	Brassica oleracea	HOM04D004410	ORTHO04D006444	7.4e-20	100.9	242	28.9
Bo2g001100	Brassica oleracea	HOM04D004410	ORTHO04D006444	1.7e-19	99.8	217	31.8
Carubv10006396m.g	Capsella rubella	HOM04D004410	ORTHO04D006444	2.2e-19	99.4	261	26.1
Brara.A01884	Brassica rapa	HOM04D004410	ORTHO04D006444	2.8e-19	99.0	245	25.3
AT4G16550	Arabidopsis thaliana	HOM04D004410	ORTHO04D006444	4.8e-19	98.2	249	26.5
Carubv10006504m.g	Capsella rubella	HOM04D004410	ORTHO04D006444	3.1e-18	95.5	263	26.6
AL7G38300	Arabidopsis lyrata	HOM04D004410	ORTHO04D006444	3.1e-18	95.5	258	27.5
Tp7g15160	Schrenkiella parvula	HOM04D004410	ORTHO04D006444	2.0e-17	92.8	225	27.6
Tp7g15150	Schrenkiella parvula	HOM04D004410	ORTHO04D006444	2.6e-17	92.4	239	28.0
Bo1g053560	Brassica oleracea	HOM04D004410	ORTHO04D006444	2.6e-17	92.4	245	24.5
Bo7g104330	Brassica oleracea	HOM04D004410	ORTHO04D006444	3.4e-17	92.0	251	26.7
AL7G38280	Arabidopsis lyrata	HOM04D004410	ORTHO04D006444	4.5e-17	91.7	242	26.4
Tp7g15140	Schrenkiella parvula	HOM04D004410	ORTHO04D006444	5.9e-17	91.3	198	29.8
AL7G38310	Arabidopsis lyrata	HOM04D004410	ORTHO04D006444	1.1e-15	87.0	257	28.4
AT4G16540	Arabidopsis thaliana	HOM04D004410	ORTHO04D006444	1.4e-15	86.7	122	35.2
Brara.C04514	Brassica rapa	HOM04D004410	ORTHO04D006444	3.2e-15	85.5	236	26.7
AT4G16560	Arabidopsis thaliana	HOM04D004410	ORTHO04D006444	9.4e-15	84.0	115	37.4
RCO.g.29916.000022	Ricinus communis	HOM04D004410	ORTHO04D006444	1.6e-14	83.2	113	39.8
Bo7g104530	Brassica oleracea	HOM04D004410	ORTHO04D006444	2.1e-14	82.8	184	34.2
Brara.B02258	Brassica rapa	HOM04D004410	ORTHO04D006444	7.9e-14	80.9	198	31.3
AL7G38340	Arabidopsis lyrata	HOM04D004410	ORTHO04D006444	1.8e-13	79.7	264	24.6
Brara.C04491	Brassica rapa	HOM04D004410	ORTHO04D006444	2.6e-12	75.9	114	32.5
AT4G16555	Arabidopsis thaliana	HOM04D004410	ORTHO04D006444	7.4e-12	74.3	133	33.8
Bo02175s010	Brassica oleracea	HOM04D004410	ORTHO04D006444	1.7e-11	73.2	250	26.8
PGSC0003DMG400004806	Solanum tuberosum	HOM04D004410	ORTHO04D011440	1.6e-09	66.6	97	36.1
Peaxi162Scf00002g01721	Petunia axillaris	HOM04D004410	ORTHO04D011440	3.5e-09	65.5	98	36.7
CAN.G1218.23	Capsicum annuum	HOM04D004410	ORTHO04D011440	3.5e-09	65.5	97	35.1
Solyc08g078720.2	Solanum lycopersicum	HOM04D004410	ORTHO04D011440	1.3e-08	63.5	97	35.1
Peaxi162Scf00002g00191	Petunia axillaris	HOM04D001804	ORTHO04D002947	5.0e-08	61.6	211	21.8
AH006531	Amaranthus hypochondriacus	HOM04D012800	ORTHO04D013027	9.4e-07	57.4	112	29.5

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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