Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
phs198830	Phytophtora sojae	0.0	1233	592	100.00
phs197510	Phytophtora sojae	0.0	875	593	68.97
phs198930	Phytophtora sojae	0.0	777	600	60.83
ENSG00000016391	Homo sapiens	0.0	697	576	60.42
WBGene00007917	Caenorhabditis elegans	0.0	578	561	49.73
phs172930	Phytophtora sojae	1e-144	434	386	56.74
TP08G04640	Thalassiosira pseudonana	2e-144	436	522	45.59
AA0058G00090	Aureococcus anophagefferens	4e-127	414	560	44.29
ES0003G00250	Ectocarpus siliculosus	2e-115	363	581	37.52
emh310600	Emiliania huxleyi	1e-109	349	590	36.61
ccr175760	Chondrus crispus	1e-107	344	567	37.74
FBgn0030592	Drosophila melanogaster	1e-102	333	592	38.68
FC007G06160	Fragilariopsis cylindrus	3e-102	328	571	35.90
FBgn0030590	Drosophila melanogaster	7e-102	330	571	36.43
PI00G68540	Picochlorum sp. SENEW3 (SE3)	1e-100	325	608	34.54
FBgn0266435	Drosophila melanogaster	1e-99	322	573	37.35
CV00G70600	Coccomyxa subellipsoidea C-169	3e-99	321	576	35.42
FBgn0039415	Drosophila melanogaster	6e-97	315	576	36.81
VC00G100730	Volvox carteri	7e-97	315	591	34.18
CR12G06760	Chlamydomonas reinhardtii	7e-97	315	592	34.12
RCC4223.04g05780	Picochlorum_RCC4223	9e-97	315	581	35.11
FBgn0030598	Drosophila melanogaster	2e-96	314	570	36.14
Naga_100099g13	Nannochloropsis gaditana	3e-95	323	594	35.69
CNC64A_037G00370	Chlorella sp NC64A	6e-95	309	593	34.57
PTI_02G04580	Phaeodactylum tricornutum	2e-94	308	585	33.85
Naga_100004g95	Nannochloropsis gaditana	6e-94	308	587	34.75
AC00G81700	Asterochloris sp. Cgr-DA1pho v2.0	3e-90	298	588	33.67
FBgn0001112	Drosophila melanogaster	8e-90	296	562	35.05
emh197990	Emiliania huxleyi	1e-89	296	604	33.77
emh706340	Emiliania huxleyi	1e-89	296	604	33.77
FBgn0030588	Drosophila melanogaster	1e-88	293	577	36.57
AA0010G01840	Aureococcus anophagefferens	1e-88	291	569	36.91
FBgn0030596	Drosophila melanogaster	3e-88	293	590	35.76
CM16G00880	Cyanidioschyzon merolae	3e-86	288	601	34.11
FBgn0030589	Drosophila melanogaster	4e-82	276	575	34.43
FBgn0030587	Drosophila melanogaster	2e-81	274	577	36.05
FBgn0030594	Drosophila melanogaster	5e-80	271	577	32.58
emh610010	Emiliania huxleyi	9e-80	270	632	34.65
FBgn0030586	Drosophila melanogaster	1e-77	264	577	34.14
FBgn0030593	Drosophila melanogaster	8e-76	259	573	32.81
emh381540	Emiliania huxleyi	5e-74	255	628	33.92
emh222900	Emiliania huxleyi	2e-68	238	646	32.20
emh92500	Emiliania huxleyi	4e-59	208	388	37.11
AA0058G00110	Aureococcus anophagefferens	5e-59	205	296	40.54
PTI_02G04520	Phaeodactylum tricornutum	5e-49	184	555	28.47
DDB_G0287229	Dictyostelium discoideum	6e-49	184	585	27.18
phs157680	Phytophtora sojae	1e-45	175	580	27.07
Naga_100105g4	Nannochloropsis gaditana	2e-45	176	637	26.06
gsu91190	Galdieria sulphuraria	2e-43	161	220	41.82
FBgn0037896	Drosophila melanogaster	4e-43	167	580	28.79
ES0089G00140	Ectocarpus siliculosus	1e-42	167	662	27.34
Naga_100225g10	Nannochloropsis gaditana	1e-41	162	586	27.30
ES0475G00020	Ectocarpus siliculosus	1e-38	154	625	28.00
gsu91210	Galdieria sulphuraria	7e-37	143	275	33.82
Naga_100040g2	Nannochloropsis gaditana	1e-35	143	474	27.43
FBgn0030597	Drosophila melanogaster	1e-34	142	630	28.10
emh92480	Emiliania huxleyi	4e-34	133	198	45.45
OS04G48400	Oryza sativa	3e-33	137	574	27.70
ATR_00025G03910	Amborella trichopoda	1e-31	132	562	28.47
FC027G00320	Fragilariopsis cylindrus	3e-31	131	578	25.95
ccr36220	Chondrus crispus	3e-30	128	563	28.42
AT1G14190	Arabidopsis thaliana	6e-30	127	558	26.88
AT1G14185	Arabidopsis thaliana	1e-29	126	562	27.05
ATR_00069G01340	Amborella trichopoda	3e-29	125	588	27.21
PP00078G00400	Physcomitrella patens	4e-29	125	583	28.30
OS06G44540	Oryza sativa	1e-27	121	555	27.21
PTI_10G02300	Phaeodactylum tricornutum	5e-27	120	667	23.54
OS02G45530	Oryza sativa	2e-25	114	573	26.88
ATR_00036G00190	Amborella trichopoda	6e-24	110	574	26.13
AT3G56060	Arabidopsis thaliana	1e-23	108	568	26.23
AT1G73050	Arabidopsis thaliana	5e-23	107	576	26.04
AT1G12570	Arabidopsis thaliana	1e-22	105	585	25.30
OS09G19930	Oryza sativa	8e-22	103	595	26.72
AA0005G05600	Aureococcus anophagefferens	9e-22	97.1	141	39.72
ccr51120	Chondrus crispus	1e-20	100	550	26.00
OS08G31030	Oryza sativa	9e-20	97.1	590	25.93
OS10G38050	Oryza sativa	9e-20	97.1	581	25.65
PP00003G02580	Physcomitrella patens	1e-19	96.7	582	26.12
AT5G51950	Arabidopsis thaliana	2e-19	96.3	582	25.43
FC014G01320	Fragilariopsis cylindrus	2e-19	96.3	330	27.88
AT1G72970	Arabidopsis thaliana	7e-19	94.4	569	25.31
emh751500	Emiliania huxleyi	1e-18	93.6	585	25.81
AT5G51930	Arabidopsis thaliana	2e-18	92.8	569	25.31
AA0005G05800	Aureococcus anophagefferens	3e-17	89.7	321	33.64
emh223740	Emiliania huxleyi	5e-17	85.1	207	31.40
OS03G02700	Oryza sativa	9e-17	87.8	589	26.15
PP00078G00390	Physcomitrella patens	6e-16	84.7	573	25.83
AA0002G03300	Aureococcus anophagefferens	6e-14	79.7	648	22.84
RCC4223.08g04290	Picochlorum_RCC4223	7e-14	78.6	558	24.19
PP00472G00030	Physcomitrella patens	1e-13	77.4	341	27.27
PI00G66040	Picochlorum sp. SENEW3 (SE3)	1e-13	77.8	564	23.40
emh416920	Emiliania huxleyi	2e-13	76.6	204	29.90
phs334210	Phytophtora sojae	2e-12	73.6	319	26.65
ATR_00028G00950	Amborella trichopoda	4e-12	70.9	242	26.03
phs192170	Phytophtora sojae	9e-12	72.0	577	23.57
ATR_00028G00940	Amborella trichopoda	9e-11	65.5	75	46.67
ATR_00028G00930	Amborella trichopoda	1e-10	66.6	270	25.56
PP03962G00010	Physcomitrella patens	3e-10	64.3	213	27.70
PP00085G00680	Physcomitrella patens	1e-09	65.1	349	25.21
phs36230	Phytophtora sojae	9e-08	59.3	294	25.51

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment